RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 GPBAR1Q8TDU6 330 aa7.44□□□□□ -1.22
CTDSPL2-207ENST00000559738 EMILIN2Q9BXX0 1053 aa7.44□□□□□ -1.22
CTDSPL2-207ENST00000559738 CBX8Q9HC52 389 aa7.44□□□□□ -1.22
CTDSPL2-207ENST00000559738 TTF2Q9UNY4 1162 aaKnown RBP7.44□□□□□ -1.22
CTDSPL2-207ENST00000559738 DAGLAQ9Y4D2 1042 aa7.44□□□□□ -1.22
CTDSPL2-207ENST00000559738 DYNC1LI2O43237 492 aaPredicted RBP7.43□□□□□ -1.22
CTDSPL2-207ENST00000559738 SLFN14P0C7P3 912 aa7.43□□□□□ -1.22
CTDSPL2-207ENST00000559738 ID3Q02535 119 aa7.43□□□□□ -1.22
CTDSPL2-207ENST00000559738 MCTP1Q6DN14 999 aa7.43□□□□□ -1.22
CTDSPL2-207ENST00000559738 GATA6Q92908 595 aa7.43□□□□□ -1.22
CTDSPL2-207ENST00000559738 FANCD2OSQ96PS1 177 aa7.43□□□□□ -1.22
CTDSPL2-207ENST00000559738 DISC1Q9NRI5 854 aa7.43□□□□□ -1.22
CTDSPL2-207ENST00000559738 WNT11O96014 354 aa7.42□□□□□ -1.22
CTDSPL2-207ENST00000559738 MSMPQ1L6U9 139 aa7.42□□□□□ -1.22
CTDSPL2-207ENST00000559738 ZC3H12AQ5D1E8 599 aaKnown RBP7.42□□□□□ -1.22
CTDSPL2-207ENST00000559738 MEI1Q5TIA1 1274 aa7.42□□□□□ -1.22
CTDSPL2-207ENST00000559738 PCNX4Q63HM2 1172 aa7.42□□□□□ -1.22
CTDSPL2-207ENST00000559738 SEZ6L2Q6UXD5 910 aa7.42□□□□□ -1.22
CTDSPL2-207ENST00000559738 SV2BQ7L1I2 683 aa7.42□□□□□ -1.22
CTDSPL2-207ENST00000559738 TMC4Q7Z404 712 aa7.42□□□□□ -1.22
CTDSPL2-207ENST00000559738 HOMEZQ8IX15 550 aa7.42□□□□□ -1.22
CTDSPL2-207ENST00000559738 LGR6Q9HBX8 967 aa7.42□□□□□ -1.22
CTDSPL2-207ENST00000559738 CYP26A1O43174 497 aa7.41□□□□□ -1.22
CTDSPL2-207ENST00000559738 CTSHP09668 335 aa7.41□□□□□ -1.22
CTDSPL2-207ENST00000559738 ERCC3P19447 782 aa7.41□□□□□ -1.22
CTDSPL2-207ENST00000559738 IRAK1P51617 712 aa7.41□□□□□ -1.22
CTDSPL2-207ENST00000559738 PSMD2Q13200 908 aa7.41□□□□□ -1.22
CTDSPL2-207ENST00000559738 LLGL2Q6P1M3 1020 aa7.41□□□□□ -1.22
CTDSPL2-207ENST00000559738 SAMM50Q9Y512 469 aa7.41□□□□□ -1.22
CTDSPL2-207ENST00000559738 TRIM37O94972 964 aa7.4□□□□□ -1.22
CTDSPL2-207ENST00000559738 TTLL4Q14679 1199 aa7.4□□□□□ -1.22
CTDSPL2-207ENST00000559738 ZNF765Q7L2R6 523 aa7.4□□□□□ -1.22
CTDSPL2-207ENST00000559738 ATXN3LQ9H3M9 355 aa7.4□□□□□ -1.22
CTDSPL2-207ENST00000559738 PIDD1Q9HB75 910 aa7.4□□□□□ -1.22
CTDSPL2-207ENST00000559738 LRRC4CQ9HCJ2 640 aa7.4□□□□□ -1.22
CTDSPL2-207ENST00000559738 C1GALT1Q9NS00 363 aa7.4□□□□□ -1.22
CTDSPL2-207ENST00000559738 ANGEL1Q9UNK9 670 aaKnown RBP7.4□□□□□ -1.22
CTDSPL2-207ENST00000559738 NEFMP07197 916 aa7.39□□□□□ -1.23
CTDSPL2-207ENST00000559738 HNRNPUQ00839 825 aaKnown RBP eCLIP7.39□□□□□ -1.23
CTDSPL2-207ENST00000559738 XPCQ01831 940 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-207ENST00000559738 PTPN11Q06124 597 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-207ENST00000559738 CCDC85BQ15834 202 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-207ENST00000559738 DUSP27Q5VZP5 1158 aa7.39□□□□□ -1.23
CTDSPL2-207ENST00000559738 ACSBG1Q96GR2 724 aa7.39□□□□□ -1.23
CTDSPL2-207ENST00000559738 CYP8B1Q9UNU6 501 aa7.39□□□□□ -1.23
CTDSPL2-207ENST00000559738 ZBTB7CA1YPR0 619 aa7.38□□□□□ -1.23
CTDSPL2-207ENST00000559738 HCLS1P14317 486 aaPredicted RBP7.38□□□□□ -1.23
CTDSPL2-207ENST00000559738 ERVK-24P63145 666 aa7.38□□□□□ -1.23
CTDSPL2-207ENST00000559738 CYP27A1Q02318 531 aa7.38□□□□□ -1.23
CTDSPL2-207ENST00000559738 LRRC14Q15048 493 aa7.38□□□□□ -1.23
CTDSPL2-207ENST00000559738 TTBK2Q6IQ55 1244 aa7.38□□□□□ -1.23
CTDSPL2-207ENST00000559738 CSADQ9Y600 493 aa7.38□□□□□ -1.23
CTDSPL2-207ENST00000559738 COL17A1Q9UMD9 1497 aaPredicted RBP7.37□□□□□ -1.23
CTDSPL2-207ENST00000559738 BTBD11A6QL63 1104 aa7.37□□□□□ -1.23
CTDSPL2-207ENST00000559738 DCDC2CA8MYV0 355 aa7.37□□□□□ -1.23
CTDSPL2-207ENST00000559738 NTF4P34130 210 aa7.37□□□□□ -1.23
CTDSPL2-207ENST00000559738 RING1Q06587 406 aa7.37□□□□□ -1.23
CTDSPL2-207ENST00000559738 CDK5R2Q13319 367 aa7.37□□□□□ -1.23
CTDSPL2-207ENST00000559738 SMYD4Q8IYR2 804 aaPredicted RBP7.37□□□□□ -1.23
CTDSPL2-207ENST00000559738 GAL3ST3Q96A11 431 aa7.37□□□□□ -1.23
CTDSPL2-207ENST00000559738 KRTAP4-12Q9BQ66 201 aa7.37□□□□□ -1.23
CTDSPL2-207ENST00000559738 CCDC39Q9UFE4 941 aa7.37□□□□□ -1.23
CTDSPL2-207ENST00000559738 PRNPP04156 253 aa7.36□□□□□ -1.23
CTDSPL2-207ENST00000559738 MAP3K11Q16584 847 aa7.36□□□□□ -1.23
CTDSPL2-207ENST00000559738 PPM1JQ5JR12 505 aa7.36□□□□□ -1.23
CTDSPL2-207ENST00000559738 TMCO4Q5TGY1 634 aa7.36□□□□□ -1.23
CTDSPL2-207ENST00000559738 SCARA3Q6AZY7 606 aa7.36□□□□□ -1.23
CTDSPL2-207ENST00000559738 VSIG10LQ86VR7 867 aa7.36□□□□□ -1.23
CTDSPL2-207ENST00000559738 C12orf40Q86WS4 652 aa7.36□□□□□ -1.23
CTDSPL2-207ENST00000559738 RNF214Q8ND24 703 aa7.36□□□□□ -1.23
CTDSPL2-207ENST00000559738 ISL2Q96A47 359 aa7.36□□□□□ -1.23
CTDSPL2-207ENST00000559738 PCDHA4Q9UN74 947 aa7.36□□□□□ -1.23
CTDSPL2-207ENST00000559738 USP31Q70CQ4 1352 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 SORBS3O60504 671 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 RNGTTO60942 597 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 TAL1P17542 331 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 LIG3P49916 1009 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 ST13P50502 369 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 INPP5AQ14642 412 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 TAF1CQ15572 869 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 OGFOD3Q6PK18 319 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 NFXL1Q6ZNB6 911 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 UBE3DQ7Z6J8 389 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 ABI1Q8IZP0 508 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 GIPC2Q8TF65 315 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 BCL2L13Q9BXK5 485 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 BSDC1Q9NW68 430 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 ZC3H7BQ9UGR2 993 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 PCDHB5Q9Y5E4 795 aa7.35□□□□□ -1.23
CTDSPL2-207ENST00000559738 FAM87AP0C7U9 286 aa7.34□□□□□ -1.23
CTDSPL2-207ENST00000559738 CDK8P49336 464 aa7.34□□□□□ -1.23
CTDSPL2-207ENST00000559738 RPS26P62854 115 aaKnown RBP7.34□□□□□ -1.23
CTDSPL2-207ENST00000559738 LRFN4Q6PJG9 635 aa7.34□□□□□ -1.23
CTDSPL2-207ENST00000559738 AGMOQ6ZNB7 445 aa7.34□□□□□ -1.23
CTDSPL2-207ENST00000559738 CRELD1Q96HD1 420 aa7.34□□□□□ -1.23
CTDSPL2-207ENST00000559738 SEPT6Q14141 434 aa7.33□□□□□ -1.24
CTDSPL2-207ENST00000559738 PLPPR2Q96GM1 343 aa7.33□□□□□ -1.24
CTDSPL2-207ENST00000559738 FBXL18Q96ME1 805 aa7.33□□□□□ -1.24
CTDSPL2-207ENST00000559738 NOC4LQ9BVI4 516 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms