RNA–Protein interactions for RNA: ENST00000559561.5

MEIS2-215, Transcript of Meis homeobox 2, human

APPRIS ALT1 TSL 5 BASIC

Gene MEIS2, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEIS2-215	ENST00000559561	DBNDD1	Q9H9R9	158 aa		16.05	■□□□□ 0.16
MEIS2-215	ENST00000559561	ATF5	Q9Y2D1	282 aa	Predicted RBP	16.05	■□□□□ 0.16
MEIS2-215	ENST00000559561	TACC3	Q9Y6A5	838 aa		16.05	■□□□□ 0.16
MEIS2-215	ENST00000559561	ROBO3	Q96MS0	1386 aa		16.05	■□□□□ 0.16
MEIS2-215	ENST00000559561	BRD1	O95696	1058 aa		16.04	■□□□□ 0.16
MEIS2-215	ENST00000559561	SOGA3	Q5TF21	947 aa		16.04	■□□□□ 0.16
MEIS2-215	ENST00000559561	ILDR2	Q71H61	639 aa		16.04	■□□□□ 0.16
MEIS2-215	ENST00000559561	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	16.04	■□□□□ 0.16
MEIS2-215	ENST00000559561	FBXW7	Q969H0	707 aa		16.04	■□□□□ 0.16
MEIS2-215	ENST00000559561	SGIP1	Q9BQI5	828 aa		16.04	■□□□□ 0.16
MEIS2-215	ENST00000559561	MTA3	Q9BTC8	594 aa		16.04	■□□□□ 0.16
MEIS2-215	ENST00000559561	MKRN1	Q9UHC7	482 aa	Known RBP	16.04	■□□□□ 0.16
MEIS2-215	ENST00000559561	MINDY4B	A8MYZ0	360 aa		16.03	■□□□□ 0.16
MEIS2-215	ENST00000559561	SH2B2	O14492	632 aa	Predicted RBP	16.03	■□□□□ 0.16
MEIS2-215	ENST00000559561	FGR	P09769	529 aa		16.03	■□□□□ 0.16
MEIS2-215	ENST00000559561	GJB2	P29033	226 aa		16.03	■□□□□ 0.16
MEIS2-215	ENST00000559561	STK3	Q13188	491 aa		16.03	■□□□□ 0.16
MEIS2-215	ENST00000559561	NKX2-3	Q8TAU0	364 aa		16.03	■□□□□ 0.16
MEIS2-215	ENST00000559561	GBP4	Q96PP9	640 aa		16.03	■□□□□ 0.16
MEIS2-215	ENST00000559561	ANGEL1	Q9UNK9	670 aa	Known RBP	16.03	■□□□□ 0.16
MEIS2-215	ENST00000559561	ZDHHC9	Q9Y397	364 aa		16.03	■□□□□ 0.16
MEIS2-215	ENST00000559561	ARFGEF1	Q9Y6D6	1849 aa		16.03	■□□□□ 0.16
MEIS2-215	ENST00000559561	USP17L12	C9JPN9	530 aa		16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	USP17L21	D6R901	530 aa		16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	KDM4A	O75164	1064 aa		16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	USP5	P45974	858 aa		16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	SCRN1	Q12765	414 aa		16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	AOC3	Q16853	763 aa		16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	STRIP1	Q5VSL9	837 aa		16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	CHMP4C	Q96CF2	233 aa		16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	LLPH	Q9BRT6	129 aa	Known RBP	16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	GPHN	Q9NQX3	736 aa	Predicted RBP	16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	DAGLA	Q9Y4D2	1042 aa		16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	WDR33	Q9C0J8	1336 aa	Known RBP	16.02	■□□□□ 0.16
MEIS2-215	ENST00000559561	CYP2D7	A0A087X1C5	515 aa		16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	PPIP5K2	O43314	1243 aa		16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	PDIA3	P30101	505 aa	Known RBP	16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	MCM4	P33991	863 aa		16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	RHBDL3	P58872	404 aa		16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	DACT2	Q5SW24	774 aa		16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	SGMS1	Q86VZ5	419 aa		16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	INCENP	Q9NQS7	918 aa		16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	PIM2	Q9P1W9	311 aa		16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	TTF2	Q9UNY4	1162 aa	Known RBP	16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	16.02	■□□□□ 0.15
MEIS2-215	ENST00000559561	COL4A5	P29400	1685 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	KLF18	A0A0U1RQI7	1052 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	ORC4	O43929	436 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	SLC3A2	P08195	630 aa	Known RBP	16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	PDIA4	P13667	645 aa	Known RBP	16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	LIFR	P42702	1097 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	NT5C2	P49902	561 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	RRP12	Q5JTH9	1297 aa	Known RBP	16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	TEX11	Q8IYF3	940 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	SMARCC2	Q8TAQ2	1214 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	IGDCC4	Q8TDY8	1250 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	ESR2	Q92731	530 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	VPS33B	Q9H267	617 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	TOMM22	Q9NS69	142 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	ZSWIM5	Q9P217	1185 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	BRPF3	Q9ULD4	1205 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	MYH8	P13535	1937 aa		16.01	■□□□□ 0.15
MEIS2-215	ENST00000559561	NID2	Q14112	1375 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	USP17L3	A6NCW0	530 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	USP17L4	A6NCW7	530 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	DDX11L8	A8MPP1	907 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	GOLGA8B	A8MQT2	603 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	SYT1	P21579	422 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	SART3	Q15020	963 aa	Known RBP	16	■□□□□ 0.15
MEIS2-215	ENST00000559561	TMEM67	Q5HYA8	995 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	C12orf60	Q5U649	245 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	HHIPL2	Q6UWX4	724 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	USP17L1	Q7RTZ2	530 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	AMOTL1	Q8IY63	956 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	MXD3	Q9BW11	206 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	LY9	Q9HBG7	655 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	MCM9	Q9NXL9	1143 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	CD2AP	Q9Y5K6	639 aa		16	■□□□□ 0.15
MEIS2-215	ENST00000559561	MYH15	Q9Y2K3	1946 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	SMIM22	K7EJ46	135 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	STX6	O43752	255 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	USP17L8	P0C7I0	530 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	CYP2D6	P10635	497 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	PDC	P20941	246 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	NSUN7	Q8NE18	718 aa	Known RBP	15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	TGFBRAP1	Q8WUH2	860 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	TEKT1	Q969V4	418 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	KCNQ5	Q9NR82	932 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	HPS5	Q9UPZ3	1129 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561	FLT1	P17948	1338 aa		15.99	■□□□□ 0.15
MEIS2-215	ENST00000559561		F8W031	263 aa	Predicted RBP	15.98	■□□□□ 0.15
MEIS2-215	ENST00000559561	IFIT3	O14879	490 aa	Known RBP	15.98	■□□□□ 0.15
MEIS2-215	ENST00000559561	BAG4	O95429	457 aa	Known RBP	15.98	■□□□□ 0.15
MEIS2-215	ENST00000559561	PTGER2	P43116	358 aa		15.98	■□□□□ 0.15
MEIS2-215	ENST00000559561	HMGN5	P82970	282 aa	Known RBP	15.98	■□□□□ 0.15
MEIS2-215	ENST00000559561	HDLBP	Q00341	1268 aa	Known RBP	15.98	■□□□□ 0.15
MEIS2-215	ENST00000559561	CACNB1	Q02641	598 aa	Predicted RBP	15.98	■□□□□ 0.15
MEIS2-215	ENST00000559561	DALRD3	Q5D0E6	543 aa	Known RBP	15.98	■□□□□ 0.15
MEIS2-215	ENST00000559561	APOA5	Q6Q788	366 aa		15.98	■□□□□ 0.15
MEIS2-215	ENST00000559561	MRI	Q9BWK5	157 aa		15.98	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms