RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 EVI5LQ96CN4 794 aa24.51■■□□□ 1.51
TSPAN3-207ENST00000559494 MKRN1Q9UHC7 482 aaKnown RBP24.51■■□□□ 1.51
TSPAN3-207ENST00000559494 RPAP1Q9BWH6 1393 aaPredicted RBP24.5■■□□□ 1.51
TSPAN3-207ENST00000559494 DDTLA6NHG4 134 aaPredicted RBP24.5■■□□□ 1.51
TSPAN3-207ENST00000559494 CERS3Q8IU89 383 aa24.5■■□□□ 1.51
TSPAN3-207ENST00000559494 FSD1Q9BTV5 496 aa24.5■■□□□ 1.51
TSPAN3-207ENST00000559494 ANGEL1Q9UNK9 670 aaKnown RBP24.5■■□□□ 1.51
TSPAN3-207ENST00000559494 PPP1R12BO60237 982 aaPredicted RBP24.49■■□□□ 1.51
TSPAN3-207ENST00000559494 ZFYP08048 801 aaPredicted RBP24.49■■□□□ 1.51
TSPAN3-207ENST00000559494 MAP3K11Q16584 847 aa24.49■■□□□ 1.51
TSPAN3-207ENST00000559494 ARMC9Q7Z3E5 817 aa24.49■■□□□ 1.51
TSPAN3-207ENST00000559494 MAPKAPK5Q8IW41 473 aa24.49■■□□□ 1.51
TSPAN3-207ENST00000559494 LCORLQ8N3X6 602 aa24.49■■□□□ 1.51
TSPAN3-207ENST00000559494 PUS7LQ9H0K6 701 aaKnown RBP24.49■■□□□ 1.51
TSPAN3-207ENST00000559494 OSBPL5Q9H0X9 879 aaPredicted RBP24.49■■□□□ 1.51
TSPAN3-207ENST00000559494 CDK5RAP2Q96SN8 1893 aa24.49■■□□□ 1.51
TSPAN3-207ENST00000559494 PAPPA2Q9BXP8 1791 aa24.48■■□□□ 1.51
TSPAN3-207ENST00000559494 LDLRAD1Q5T700 205 aa24.48■■□□□ 1.51
TSPAN3-207ENST00000559494 ZSCAN29Q8IWY8 852 aaPredicted RBP24.48■■□□□ 1.51
TSPAN3-207ENST00000559494 OSBP2Q969R2 916 aa24.48■■□□□ 1.51
TSPAN3-207ENST00000559494 HHIPL1Q96JK4 782 aa24.48■■□□□ 1.51
TSPAN3-207ENST00000559494 ARMT1Q9H993 441 aa24.48■■□□□ 1.51
TSPAN3-207ENST00000559494 TRIM6-TRIM34B2RNG4 842 aa24.47■■□□□ 1.51
TSPAN3-207ENST00000559494 MBD4O95243 580 aa24.47■■□□□ 1.51
TSPAN3-207ENST00000559494 MIGA2Q7L4E1 593 aa24.47■■□□□ 1.51
TSPAN3-207ENST00000559494 APPBP2Q92624 585 aa24.47■■□□□ 1.51
TSPAN3-207ENST00000559494 PPP4R2Q9NY27 417 aa24.47■■□□□ 1.51
TSPAN3-207ENST00000559494 FLT1P17948 1338 aa24.46■■□□□ 1.51
TSPAN3-207ENST00000559494 USP5P45974 858 aa24.46■■□□□ 1.51
TSPAN3-207ENST00000559494 LRRFIP1Q32MZ4 808 aaKnown RBP24.46■■□□□ 1.51
TSPAN3-207ENST00000559494 RILPL2Q969X0 211 aa24.46■■□□□ 1.51
TSPAN3-207ENST00000559494 HOOK2Q96ED9 719 aa24.46■■□□□ 1.51
TSPAN3-207ENST00000559494 CSRNP1Q96S65 589 aa24.46■■□□□ 1.51
TSPAN3-207ENST00000559494 SLURP2P0DP57 97 aa24.45■■□□□ 1.5
TSPAN3-207ENST00000559494 VEGFBP49765 207 aa24.45■■□□□ 1.5
TSPAN3-207ENST00000559494 CYP4F22Q6NT55 531 aa24.45■■□□□ 1.5
TSPAN3-207ENST00000559494 RGMBQ6NW40 437 aa24.45■■□□□ 1.5
TSPAN3-207ENST00000559494 SKAP1Q86WV1 359 aa24.45■■□□□ 1.5
TSPAN3-207ENST00000559494 KLRG1Q96E93 195 aa24.45■■□□□ 1.5
TSPAN3-207ENST00000559494 CRNKL1Q9BZJ0 848 aaKnown RBP24.45■■□□□ 1.5
TSPAN3-207ENST00000559494 ATRNL1Q5VV63 1379 aa24.45■■□□□ 1.5
TSPAN3-207ENST00000559494 FOCADQ5VW36 1801 aa24.44■■□□□ 1.5
TSPAN3-207ENST00000559494 PRKAB2O43741 272 aa24.44■■□□□ 1.5
TSPAN3-207ENST00000559494 ZMYM1Q5SVZ6 1142 aa24.44■■□□□ 1.5
TSPAN3-207ENST00000559494 SEC62Q99442 399 aaKnown RBP24.44■■□□□ 1.5
TSPAN3-207ENST00000559494 IREB2P48200 963 aaKnown RBP24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 ZNF157P51786 506 aaPredicted RBP24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 MAP3K10Q02779 954 aa24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 TTC22Q5TAA0 569 aa24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 DCAF15Q66K64 600 aa24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 PAXIP1Q6ZW49 1069 aaPredicted RBP24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 SDR42E1Q8WUS8 393 aa24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 AIDAQ96BJ3 306 aa24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 CAPNS2Q96L46 248 aa24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 STRBPQ96SI9 672 aaKnown RBP24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 SAP30BPQ9UHR5 308 aaKnown RBP24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 PALD1Q9ULE6 856 aa24.43■■□□□ 1.5
TSPAN3-207ENST00000559494 M0R2C6 588 aa24.42■■□□□ 1.5
TSPAN3-207ENST00000559494 GSPT1P15170 499 aaKnown RBP24.42■■□□□ 1.5
TSPAN3-207ENST00000559494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.42■■□□□ 1.5
TSPAN3-207ENST00000559494 CLMNQ96JQ2 1002 aa24.42■■□□□ 1.5
TSPAN3-207ENST00000559494 ZNF341Q9BYN7 854 aa24.42■■□□□ 1.5
TSPAN3-207ENST00000559494 DHX36Q9H2U1 1008 aaKnown RBP24.42■■□□□ 1.5
TSPAN3-207ENST00000559494 COL2A1P02458 1487 aaPredicted RBP24.42■■□□□ 1.5
TSPAN3-207ENST00000559494 WDR33Q9C0J8 1336 aaKnown RBP24.42■■□□□ 1.5
TSPAN3-207ENST00000559494 MAP3K9P80192 1104 aa24.41■■□□□ 1.5
TSPAN3-207ENST00000559494 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.41■■□□□ 1.5
TSPAN3-207ENST00000559494 TICAM2Q86XR7 235 aa24.41■■□□□ 1.5
TSPAN3-207ENST00000559494 ZNF112Q9UJU3 913 aa24.41■■□□□ 1.5
TSPAN3-207ENST00000559494 MYH1P12882 1939 aa24.4■■□□□ 1.5
TSPAN3-207ENST00000559494 FAM155AB1AL88 458 aaPredicted RBP24.4■■□□□ 1.5
TSPAN3-207ENST00000559494 GRM1Q13255 1194 aa24.4■■□□□ 1.5
TSPAN3-207ENST00000559494 ANKRD13AQ8IZ07 590 aa24.4■■□□□ 1.5
TSPAN3-207ENST00000559494 DCP1AQ9NPI6 582 aaPredicted RBP24.4■■□□□ 1.5
TSPAN3-207ENST00000559494 PI4KBQ9UBF8 816 aa24.4■■□□□ 1.5
TSPAN3-207ENST00000559494 SLC4A4Q9Y6R1 1079 aa24.4■■□□□ 1.5
TSPAN3-207ENST00000559494 UNCXA6NJT0 531 aa24.39■■□□□ 1.5
TSPAN3-207ENST00000559494 GPAA1O43292 621 aa24.39■■□□□ 1.5
TSPAN3-207ENST00000559494 TBC1D12O60347 775 aa24.39■■□□□ 1.5
TSPAN3-207ENST00000559494 SDSP20132 328 aa24.39■■□□□ 1.5
TSPAN3-207ENST00000559494 ECE1P42892 770 aa24.39■■□□□ 1.5
TSPAN3-207ENST00000559494 CCDC102AQ96A19 550 aa24.39■■□□□ 1.5
TSPAN3-207ENST00000559494 SLC10A4Q96EP9 437 aa24.39■■□□□ 1.5
TSPAN3-207ENST00000559494 WRNIP1Q96S55 665 aa24.39■■□□□ 1.5
TSPAN3-207ENST00000559494 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.39■■□□□ 1.5
TSPAN3-207ENST00000559494 FAM196BA6NMK8 535 aa24.38■■□□□ 1.49
TSPAN3-207ENST00000559494 PHF20L1A8MW92 1017 aa24.38■■□□□ 1.49
TSPAN3-207ENST00000559494 SLC4A8Q2Y0W8 1093 aa24.38■■□□□ 1.49
TSPAN3-207ENST00000559494 RASAL3Q86YV0 1011 aa24.38■■□□□ 1.49
TSPAN3-207ENST00000559494 ZKSCAN4Q969J2 545 aaPredicted RBP24.38■■□□□ 1.49
TSPAN3-207ENST00000559494 FAM227BQ96M60 508 aa24.38■■□□□ 1.49
TSPAN3-207ENST00000559494 ATP8A2Q9NTI2 1148 aa24.38■■□□□ 1.49
TSPAN3-207ENST00000559494 AOC2O75106 756 aa24.37■■□□□ 1.49
TSPAN3-207ENST00000559494 SLC10A3P09131 477 aa24.37■■□□□ 1.49
TSPAN3-207ENST00000559494 INPP5BP32019 993 aa24.37■■□□□ 1.49
TSPAN3-207ENST00000559494 METTL16Q86W50 562 aaKnown RBP24.37■■□□□ 1.49
TSPAN3-207ENST00000559494 FOXP4Q8IVH2 680 aaPredicted RBP24.37■■□□□ 1.49
TSPAN3-207ENST00000559494 GSG1L2A8MUP6 293 aa24.36■■□□□ 1.49
TSPAN3-207ENST00000559494 VGLL4Q14135 290 aa24.36■■□□□ 1.49
TSPAN3-207ENST00000559494 CCDC129Q6ZRS4 1044 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms