RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 AACSQ86V21 672 aa13.41□□□□□ -0.26
SPG11-216ENST00000559347 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
SPG11-216ENST00000559347 WRNIP1Q96S55 665 aa13.41□□□□□ -0.26
SPG11-216ENST00000559347 IL1RAPL2Q9NP60 686 aa13.41□□□□□ -0.26
SPG11-216ENST00000559347 DDX4Q9NQI0 724 aaKnown RBP13.41□□□□□ -0.26
SPG11-216ENST00000559347 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
SPG11-216ENST00000559347 LRP2BPQ9P2M1 347 aa13.41□□□□□ -0.26
SPG11-216ENST00000559347 ENTPD3O75355 529 aa13.4□□□□□ -0.26
SPG11-216ENST00000559347 OPTNQ96CV9 577 aa13.4□□□□□ -0.26
SPG11-216ENST00000559347 CSADQ9Y600 493 aa13.4□□□□□ -0.26
SPG11-216ENST00000559347 SNCAIPQ9Y6H5 919 aa13.4□□□□□ -0.26
SPG11-216ENST00000559347 APBB1O00213 710 aa13.39□□□□□ -0.27
SPG11-216ENST00000559347 LDHCP07864 332 aa13.39□□□□□ -0.27
SPG11-216ENST00000559347 MAP3K9P80192 1104 aa13.39□□□□□ -0.27
SPG11-216ENST00000559347 PICALMQ13492 652 aa13.39□□□□□ -0.27
SPG11-216ENST00000559347 ZFPM1Q8IX07 1006 aa13.39□□□□□ -0.27
SPG11-216ENST00000559347 CFHR5Q9BXR6 569 aa13.39□□□□□ -0.27
SPG11-216ENST00000559347 ZNF341Q9BYN7 854 aa13.39□□□□□ -0.27
SPG11-216ENST00000559347 PIH1D3Q9NQM4 214 aaKnown RBP13.39□□□□□ -0.27
SPG11-216ENST00000559347 LOC285556D6RIA3 1793 aa13.38□□□□□ -0.27
SPG11-216ENST00000559347 SPDYE5A6NIY4 337 aa13.38□□□□□ -0.27
SPG11-216ENST00000559347 IGF2BP3O00425 579 aaKnown RBP eCLIP13.38□□□□□ -0.27
SPG11-216ENST00000559347 IGSF3O75054 1194 aa13.38□□□□□ -0.27
SPG11-216ENST00000559347 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
SPG11-216ENST00000559347 MAP4K4O95819 1239 aaPredicted RBP13.38□□□□□ -0.27
SPG11-216ENST00000559347 NAA16Q6N069 864 aaPredicted RBP13.38□□□□□ -0.27
SPG11-216ENST00000559347 MIGA2Q7L4E1 593 aa13.38□□□□□ -0.27
SPG11-216ENST00000559347 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
SPG11-216ENST00000559347 ADGRA1Q86SQ6 560 aa13.38□□□□□ -0.27
SPG11-216ENST00000559347 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
SPG11-216ENST00000559347 CLASRPQ8N2M8 674 aaKnown RBP13.38□□□□□ -0.27
SPG11-216ENST00000559347 ZKSCAN4Q969J2 545 aaPredicted RBP13.38□□□□□ -0.27
SPG11-216ENST00000559347 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
SPG11-216ENST00000559347 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
SPG11-216ENST00000559347 DDTLA6NHG4 134 aaPredicted RBP13.37□□□□□ -0.27
SPG11-216ENST00000559347 INPP5BP32019 993 aa13.37□□□□□ -0.27
SPG11-216ENST00000559347 INHBEP58166 350 aa13.37□□□□□ -0.27
SPG11-216ENST00000559347 OTUD5Q96G74 571 aa13.37□□□□□ -0.27
SPG11-216ENST00000559347 MS4A4AQ96JQ5 239 aa13.37□□□□□ -0.27
SPG11-216ENST00000559347 ZNF112Q9UJU3 913 aa13.37□□□□□ -0.27
SPG11-216ENST00000559347 ZSWIM8A7E2V4 1837 aa13.36□□□□□ -0.27
SPG11-216ENST00000559347 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
SPG11-216ENST00000559347 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
SPG11-216ENST00000559347 NOM1Q5C9Z4 860 aaKnown RBP13.36□□□□□ -0.27
SPG11-216ENST00000559347 NOL9Q5SY16 702 aaKnown RBP13.36□□□□□ -0.27
SPG11-216ENST00000559347 ERO1BQ86YB8 467 aa13.36□□□□□ -0.27
SPG11-216ENST00000559347 SH3RF3Q8TEJ3 882 aaPredicted RBP13.36□□□□□ -0.27
SPG11-216ENST00000559347 NOL10Q9BSC4 688 aaKnown RBP13.36□□□□□ -0.27
SPG11-216ENST00000559347 OSBPL5Q9H0X9 879 aaPredicted RBP13.36□□□□□ -0.27
SPG11-216ENST00000559347 ANTXR1Q9H6X2 564 aa13.36□□□□□ -0.27
SPG11-216ENST00000559347 AATFQ9NY61 560 aaKnown RBP eCLIP13.36□□□□□ -0.27
SPG11-216ENST00000559347 MYH8P13535 1937 aa13.36□□□□□ -0.27
SPG11-216ENST00000559347 IDH1O75874 414 aaKnown RBP13.35□□□□□ -0.27
SPG11-216ENST00000559347 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
SPG11-216ENST00000559347 IFIT2P09913 472 aaKnown RBP13.35□□□□□ -0.27
SPG11-216ENST00000559347 GTF2A2P52657 109 aa13.35□□□□□ -0.27
SPG11-216ENST00000559347 PPIL2Q13356 520 aa13.35□□□□□ -0.27
SPG11-216ENST00000559347 ZSCAN29Q8IWY8 852 aaPredicted RBP13.35□□□□□ -0.27
SPG11-216ENST00000559347 TEX11Q8IYF3 940 aa13.35□□□□□ -0.27
SPG11-216ENST00000559347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.35□□□□□ -0.27
SPG11-216ENST00000559347 BRI3BPQ8WY22 251 aa13.35□□□□□ -0.27
SPG11-216ENST00000559347 PTPN18Q99952 460 aa13.35□□□□□ -0.27
SPG11-216ENST00000559347 LRRCC1Q9C099 1032 aa13.35□□□□□ -0.27
SPG11-216ENST00000559347 R3HDMLQ9H3Y0 253 aa13.35□□□□□ -0.27
SPG11-216ENST00000559347 CENPFP49454 3210 aa13.35□□□□□ -0.27
SPG11-216ENST00000559347 FLT1P17948 1338 aa13.35□□□□□ -0.27
SPG11-216ENST00000559347 CCL15-CCL14A0A0B4J2E2 113 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 PHF20L1A8MW92 1017 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 IRF6O14896 467 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 CAPN15O75808 1086 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 BAG3O95817 575 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 SLURP2P0DP57 97 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 PLCG2P16885 1265 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 PPP4CP60510 307 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 MAP3K10Q02779 954 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 PPATQ06203 517 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 CCL15Q16663 113 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 ZNF296Q8WUU4 475 aaPredicted RBP13.34□□□□□ -0.27
SPG11-216ENST00000559347 ABHD8Q96I13 439 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 MCOLN1Q9GZU1 580 aa13.34□□□□□ -0.27
SPG11-216ENST00000559347 BAZ2AQ9UIF9 1905 aaKnown RBP13.33□□□□□ -0.28
SPG11-216ENST00000559347 GPR25O00155 361 aa13.33□□□□□ -0.28
SPG11-216ENST00000559347 CYP7A1P22680 504 aa13.33□□□□□ -0.28
SPG11-216ENST00000559347 DGKZQ13574 1117 aa13.33□□□□□ -0.28
SPG11-216ENST00000559347 TTF1Q15361 905 aaPredicted RBP13.33□□□□□ -0.28
SPG11-216ENST00000559347 TMED8Q6PL24 325 aaPredicted RBP13.33□□□□□ -0.28
SPG11-216ENST00000559347 MAGEB6Q8N7X4 407 aa13.33□□□□□ -0.28
SPG11-216ENST00000559347 DNAJC2Q99543 621 aaKnown RBP13.33□□□□□ -0.28
SPG11-216ENST00000559347 BCL11AQ9H165 835 aa13.33□□□□□ -0.28
SPG11-216ENST00000559347 FAM196BA6NMK8 535 aa13.32□□□□□ -0.28
SPG11-216ENST00000559347 SMARCA5O60264 1052 aaPredicted RBP13.32□□□□□ -0.28
SPG11-216ENST00000559347 DYNLL1P63167 89 aaKnown RBP13.32□□□□□ -0.28
SPG11-216ENST00000559347 MAP3K12Q12852 859 aa13.32□□□□□ -0.28
SPG11-216ENST00000559347 CRHR2Q13324 411 aa13.32□□□□□ -0.28
SPG11-216ENST00000559347 SNAPC2Q13487 334 aa13.32□□□□□ -0.28
SPG11-216ENST00000559347 OTUD7BQ6GQQ9 843 aa13.32□□□□□ -0.28
SPG11-216ENST00000559347 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
SPG11-216ENST00000559347 CTU1Q7Z7A3 348 aaKnown RBP13.32□□□□□ -0.28
SPG11-216ENST00000559347 SCYL3Q8IZE3 742 aa13.32□□□□□ -0.28
SPG11-216ENST00000559347 CRBNQ96SW2 442 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms