RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, human

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-215	ENST00000559201	SUGT1	Q9Y2Z0	365 aa		12.51	□□□□□ -0.41
LRRC49-215	ENST00000559201	STK36	Q9NRP7	1315 aa		12.51	□□□□□ -0.41
LRRC49-215	ENST00000559201	SBF2	Q86WG5	1849 aa		12.51	□□□□□ -0.41
LRRC49-215	ENST00000559201	GOLGA8A	A7E2F4	631 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	MINDY4B	A8MYZ0	360 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	ORC4	O43929	436 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	NPR1	P16066	1061 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	PLCG2	P16885	1265 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	IARS	P41252	1262 aa	Known RBP	12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	NASP	P49321	788 aa	Predicted RBP	12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	CTDSPL2	Q05D32	466 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	PDE4B	Q07343	736 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	CCDC173	Q0VFZ6	552 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	CHAF1A	Q13111	956 aa	Predicted RBP	12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	TRIM29	Q14134	588 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	FERMT3	Q86UX7	667 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	IQCA1	Q86XH1	822 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	TRIM22	Q8IYM9	498 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	CCDC24	Q8N4L8	307 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	ZNF287	Q9HBT7	754 aa		12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	NCOA5	Q9HCD5	579 aa	Known RBP	12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	DDX19A	Q9NUU7	478 aa	Known RBP	12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.5	□□□□□ -0.41
LRRC49-215	ENST00000559201	TAF1L	Q8IZX4	1826 aa		12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	NEDD4	P46934	1319 aa		12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	FDPS	P14324	419 aa	Known RBP	12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	IFNAR1	P17181	557 aa		12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	GPSM2	P81274	684 aa		12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	SSRP1	Q08945	709 aa	Known RBP	12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	POTEA	Q6S8J7	498 aa		12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	TTC6	Q86TZ1	520 aa		12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	FAM163A	Q96GL9	167 aa	Predicted RBP	12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	CHAMP1	Q96JM3	812 aa		12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	CD209	Q9NNX6	404 aa		12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	TOMM22	Q9NS69	142 aa		12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	RBM28	Q9NW13	759 aa	Known RBP	12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	RBM27	Q9P2N5	1060 aa	Known RBP	12.49	□□□□□ -0.41
LRRC49-215	ENST00000559201	DOCK2	Q92608	1830 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	SYCE3	A1L190	88 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	CTAGE5	O15320	804 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	ABCB7	O75027	752 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	UFL1	O94874	794 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	FMNL1	O95466	1100 aa	Predicted RBP	12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	CAVIN2	O95810	425 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	DDR1	Q08345	913 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	RTN1	Q16799	776 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	CTR9	Q6PD62	1173 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	ADGRA1	Q86SQ6	560 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	GPHN	Q9NQX3	736 aa	Predicted RBP	12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	RTEL1	Q9NZ71	1219 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	ATP6V0A2	Q9Y487	856 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	PARP3	Q9Y6F1	533 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	MYH7	P12883	1935 aa		12.48	□□□□□ -0.41
LRRC49-215	ENST00000559201	COL1A1	P02452	1464 aa	Predicted RBP	12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	FAM205A	Q6ZU69	1335 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	PPEF1	O14829	653 aa	Predicted RBP	12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	YEATS4	O95619	227 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	XBP1	P17861	261 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	KLRK1	P26718	216 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	ADD1	P35611	737 aa	Known RBP	12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	DYNLL1	P63167	89 aa	Known RBP	12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	SAFB	Q15424	915 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	RRP12	Q5JTH9	1297 aa	Known RBP	12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	CATIP	Q7Z7H3	387 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	TBC1D16	Q8TBP0	767 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	KCNG4	Q8TDN1	519 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	SDR42E1	Q8WUS8	393 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	PPP1R9B	Q96SB3	815 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	ALG1	Q9BT22	464 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	COA1	Q9GZY4	146 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	TFIP11	Q9UBB9	837 aa	Known RBP	12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	DUOX1	Q9NRD9	1551 aa		12.47	□□□□□ -0.41
LRRC49-215	ENST00000559201	WTIP	A6NIX2	430 aa	Predicted RBP	12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	USP17L12	C9JPN9	530 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	USP17L21	D6R901	530 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	DDAH1	O94760	285 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	DEXI	O95424	95 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	PRDX5	P30044	214 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	AKAP17A	Q02040	695 aa	Known RBP	12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	SEC23A	Q15436	765 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	NTRK3	Q16288	839 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	TXNRD3	Q86VQ6	643 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	COL23A1	Q86Y22	540 aa	Predicted RBP	12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	JMY	Q8N9B5	988 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	FANCB	Q8NB91	859 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	ZNF384	Q8TF68	577 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	MASTL	Q96GX5	879 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	EYA3	Q99504	573 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	MAP3K14	Q99558	947 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	POLR3E	Q9NVU0	708 aa		12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
LRRC49-215	ENST00000559201	TIAM2	Q8IVF5	1701 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	GPR75-ASB3	A0A0A6YYF3	556 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201		A0A1W2PQ27	194 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201		A0A1W2PQ64	194 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201		A0A1W2PQD8	194 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	C6orf229	H3BNL8	230 aa		12.45	□□□□□ -0.42

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