RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 NBPF6Q5VWK0 638 aa16.7■□□□□ 0.26
CASC4-208ENST00000559151 FAM177A1Q8N128 213 aaPredicted RBP16.7■□□□□ 0.26
CASC4-208ENST00000559151 NBPF4Q96M43 638 aa16.7■□□□□ 0.26
CASC4-208ENST00000559151 EHMT1Q9H9B1 1298 aa16.7■□□□□ 0.26
CASC4-208ENST00000559151 SMAD7O15105 426 aaKnown RBP16.69■□□□□ 0.26
CASC4-208ENST00000559151 BMS1Q14692 1282 aaKnown RBP16.69■□□□□ 0.26
CASC4-208ENST00000559151 TRAPPC3LQ5T215 181 aa16.69■□□□□ 0.26
CASC4-208ENST00000559151 NOP9Q86U38 636 aaKnown RBP16.69■□□□□ 0.26
CASC4-208ENST00000559151 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
CASC4-208ENST00000559151 RRAGCQ9HB90 399 aa16.69■□□□□ 0.26
CASC4-208ENST00000559151 SERINC3Q13530 473 aa16.68■□□□□ 0.26
CASC4-208ENST00000559151 KIF4BQ2VIQ3 1234 aa16.68■□□□□ 0.26
CASC4-208ENST00000559151 WFS1O76024 890 aa16.67■□□□□ 0.26
CASC4-208ENST00000559151 UBASH3BQ8TF42 649 aa16.67■□□□□ 0.26
CASC4-208ENST00000559151 SNCAIPQ9Y6H5 919 aa16.67■□□□□ 0.26
CASC4-208ENST00000559151 DCDC2CA8MYV0 355 aa16.66■□□□□ 0.26
CASC4-208ENST00000559151 ATE1O95260 518 aa16.66■□□□□ 0.26
CASC4-208ENST00000559151 IMPDH2P12268 514 aa16.66■□□□□ 0.26
CASC4-208ENST00000559151 HDXQ7Z353 690 aa16.66■□□□□ 0.26
CASC4-208ENST00000559151 LSRQ86X29 649 aaPredicted RBP16.66■□□□□ 0.26
CASC4-208ENST00000559151 DTWD1Q8N5C7 304 aa16.66■□□□□ 0.26
CASC4-208ENST00000559151 ELMO3Q96BJ8 720 aa16.66■□□□□ 0.26
CASC4-208ENST00000559151 WDR18Q9BV38 432 aa16.66■□□□□ 0.26
CASC4-208ENST00000559151 TRIM55Q9BYV6 548 aa16.66■□□□□ 0.26
CASC4-208ENST00000559151 CORINQ9Y5Q5 1042 aa16.66■□□□□ 0.26
CASC4-208ENST00000559151 RAB33AQ14088 237 aa16.65■□□□□ 0.26
CASC4-208ENST00000559151 ZNF385CQ66K41 422 aaPredicted RBP16.65■□□□□ 0.26
CASC4-208ENST00000559151 NEDD1Q8NHV4 660 aa16.65■□□□□ 0.26
CASC4-208ENST00000559151 R3HCC1Q9Y3T6 440 aaKnown RBP16.65■□□□□ 0.26
CASC4-208ENST00000559151 HNRNPUQ00839 825 aaKnown RBP eCLIP16.64■□□□□ 0.25
CASC4-208ENST00000559151 TNNI3KQ59H18 835 aa16.64■□□□□ 0.25
CASC4-208ENST00000559151 CSADQ9Y600 493 aa16.64■□□□□ 0.25
CASC4-208ENST00000559151 HP1BP3Q5SSJ5 553 aaPredicted RBP16.63■□□□□ 0.25
CASC4-208ENST00000559151 RBBP8NLQ8NC74 664 aaPredicted RBP16.63■□□□□ 0.25
CASC4-208ENST00000559151 OR6P1Q8NGX9 317 aa16.63■□□□□ 0.25
CASC4-208ENST00000559151 TRIM11Q96F44 468 aa16.63■□□□□ 0.25
CASC4-208ENST00000559151 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
CASC4-208ENST00000559151 A0A0A0MRY4 1105 aa16.62■□□□□ 0.25
CASC4-208ENST00000559151 K7ELQ4 463 aaPredicted RBP16.62■□□□□ 0.25
CASC4-208ENST00000559151 AOC2O75106 756 aa16.62■□□□□ 0.25
CASC4-208ENST00000559151 HTR3BO95264 441 aa16.62■□□□□ 0.25
CASC4-208ENST00000559151 C12orf40Q86WS4 652 aa16.62■□□□□ 0.25
CASC4-208ENST00000559151 FMR1NBQ8N0W7 255 aaPredicted RBP16.62■□□□□ 0.25
CASC4-208ENST00000559151 PCDHGC5Q9Y5F6 944 aa16.62■□□□□ 0.25
CASC4-208ENST00000559151 PRR36Q9H6K5 1346 aa16.62■□□□□ 0.25
CASC4-208ENST00000559151 CYFIP1Q7L576 1253 aa16.61■□□□□ 0.25
CASC4-208ENST00000559151 FBXO11Q86XK2 927 aa16.61■□□□□ 0.25
CASC4-208ENST00000559151 SVOPQ8N4V2 548 aa16.61■□□□□ 0.25
CASC4-208ENST00000559151 SIRPGQ9P1W8 387 aa16.61■□□□□ 0.25
CASC4-208ENST00000559151 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
CASC4-208ENST00000559151 PRAMEF27A3QJZ7 478 aa16.6■□□□□ 0.25
CASC4-208ENST00000559151 WISP1O95388 367 aa16.6■□□□□ 0.25
CASC4-208ENST00000559151 ZC3H12AQ5D1E8 599 aaKnown RBP16.6■□□□□ 0.25
CASC4-208ENST00000559151 DLL1O00548 723 aa16.59■□□□□ 0.25
CASC4-208ENST00000559151 U2SURPO15042 1029 aaKnown RBP16.59■□□□□ 0.25
CASC4-208ENST00000559151 NFE2L2Q16236 605 aa16.59■□□□□ 0.25
CASC4-208ENST00000559151 DUOXA2Q1HG44 320 aa16.59■□□□□ 0.25
CASC4-208ENST00000559151 RUFY4Q6ZNE9 571 aa16.59■□□□□ 0.25
CASC4-208ENST00000559151 RAD18Q9NS91 495 aa16.59■□□□□ 0.25
CASC4-208ENST00000559151 ACTR10Q9NZ32 417 aa16.59■□□□□ 0.25
CASC4-208ENST00000559151 SNRPNP63162 240 aaKnown RBP16.58■□□□□ 0.24
CASC4-208ENST00000559151 CELF2-AS1Q8N7Q2 184 aa16.58■□□□□ 0.24
CASC4-208ENST00000559151 DCAF11Q8TEB1 546 aa16.58■□□□□ 0.24
CASC4-208ENST00000559151 ENAMQ9NRM1 1142 aa16.58■□□□□ 0.24
CASC4-208ENST00000559151 REV1Q9UBZ9 1251 aa16.58■□□□□ 0.24
CASC4-208ENST00000559151 SLFN14P0C7P3 912 aa16.57■□□□□ 0.24
CASC4-208ENST00000559151 PLCG1P19174 1290 aa16.57■□□□□ 0.24
CASC4-208ENST00000559151 RAC1P63000 192 aa16.57■□□□□ 0.24
CASC4-208ENST00000559151 ZNF775Q96BV0 537 aaPredicted RBP16.57■□□□□ 0.24
CASC4-208ENST00000559151 TNKS2Q9H2K2 1166 aa16.57■□□□□ 0.24
CASC4-208ENST00000559151 EXOSC6Q5RKV6 272 aaKnown RBP16.56■□□□□ 0.24
CASC4-208ENST00000559151 LINC00114Q6XXX2 140 aa16.56■□□□□ 0.24
CASC4-208ENST00000559151 MKL1Q969V6 931 aa16.56■□□□□ 0.24
CASC4-208ENST00000559151 MRFAP1L1Q96HT8 127 aa16.56■□□□□ 0.24
CASC4-208ENST00000559151 HIF3AQ9Y2N7 669 aa16.56■□□□□ 0.24
CASC4-208ENST00000559151 TACC3Q9Y6A5 838 aa16.56■□□□□ 0.24
CASC4-208ENST00000559151 MEIS3P2A8K0S8 358 aa16.55■□□□□ 0.24
CASC4-208ENST00000559151 AKAP4Q5JQC9 854 aa16.55■□□□□ 0.24
CASC4-208ENST00000559151 RUSC1Q9BVN2 902 aa16.55■□□□□ 0.24
CASC4-208ENST00000559151 PLVAPQ9BX97 442 aa16.55■□□□□ 0.24
CASC4-208ENST00000559151 TMA7Q9Y2S6 64 aaKnown RBP16.55■□□□□ 0.24
CASC4-208ENST00000559151 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
CASC4-208ENST00000559151 TMPRSS2O15393 492 aa16.54■□□□□ 0.24
CASC4-208ENST00000559151 GRK4P32298 578 aa16.54■□□□□ 0.24
CASC4-208ENST00000559151 ID3Q02535 119 aa16.54■□□□□ 0.24
CASC4-208ENST00000559151 PDE4BQ07343 736 aa16.54■□□□□ 0.24
CASC4-208ENST00000559151 PPP2R5EQ16537 467 aa16.54■□□□□ 0.24
CASC4-208ENST00000559151 PPM1JQ5JR12 505 aa16.54■□□□□ 0.24
CASC4-208ENST00000559151 ZNF746Q6NUN9 644 aaPredicted RBP16.54■□□□□ 0.24
CASC4-208ENST00000559151 TMEM40Q8WWA1 233 aa16.54■□□□□ 0.24
CASC4-208ENST00000559151 SRPK1Q96SB4 655 aaKnown RBP16.54■□□□□ 0.24
CASC4-208ENST00000559151 TMPRSS13Q9BYE2 586 aa16.54■□□□□ 0.24
CASC4-208ENST00000559151 PPP1R9AQ9ULJ8 1098 aa16.54■□□□□ 0.24
CASC4-208ENST00000559151 FAM229AH3BQW9 127 aa16.53■□□□□ 0.24
CASC4-208ENST00000559151 DNAJA2O60884 412 aa16.53■□□□□ 0.24
CASC4-208ENST00000559151 RING1Q06587 406 aa16.53■□□□□ 0.24
CASC4-208ENST00000559151 LRRFIP1Q32MZ4 808 aaKnown RBP16.53■□□□□ 0.24
CASC4-208ENST00000559151 ACAD11Q709F0 780 aa16.53■□□□□ 0.24
CASC4-208ENST00000559151 ST7Q9NRC1 585 aa16.53■□□□□ 0.24
CASC4-208ENST00000559151 TLDC2A0PJX2 215 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms