RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SHDQ96IW2 340 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 RNPC3Q96LT9 517 aaKnown RBP3.26□□□□□ -1.89
GABPB1-209ENST00000559100 CWC22Q9HCG8 908 aaKnown RBP3.26□□□□□ -1.89
GABPB1-209ENST00000559100 SLC6A14Q9UN76 642 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 TRIM33Q9UPN9 1127 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 MAPK8IP1Q9UQF2 711 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 DNAJC6O75061 913 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 CILPO75339 1184 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 B3GALT4O96024 378 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 BMP6P22004 513 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 COL8A1P27658 744 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 ADH7P40394 386 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 HNRNPUQ00839 825 aaKnown RBP eCLIP3.25□□□□□ -1.89
GABPB1-209ENST00000559100 CLCQ05315 142 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 AP3B2Q13367 1082 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 UBAP2LQ14157 1087 aaKnown RBP3.25□□□□□ -1.89
GABPB1-209ENST00000559100 DDR2Q16832 855 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 FAM182BQ5T319 152 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 RASIP1Q5U651 963 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 FAM117BQ6P1L5 589 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 HOMER1Q86YM7 354 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 REXO1Q8N1G1 1221 aaKnown RBP3.25□□□□□ -1.89
GABPB1-209ENST00000559100 VWA5B2Q8N398 1253 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 CELF2-AS1Q8N7Q2 184 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 APPBP2Q92624 585 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 LRRC3Q9BY71 257 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 ZC3H12CQ9C0D7 883 aaKnown RBP3.25□□□□□ -1.89
GABPB1-209ENST00000559100 PICK1Q9NRD5 415 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 SH2B1Q9NRF2 756 aaPredicted RBP3.25□□□□□ -1.89
GABPB1-209ENST00000559100 NDFIP2Q9NV92 336 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 FANCLQ9NW38 375 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 PFDN2Q9UHV9 154 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 ZNRF3Q9ULT6 936 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 PCDHA4Q9UN74 947 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 RNF114Q9Y508 228 aa3.25□□□□□ -1.89
GABPB1-209ENST00000559100 FAM221AA4D161 298 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 ENPP3O14638 875 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 PDPK1O15530 556 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 SIN3BO75182 1162 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 RGS9O75916 674 aaPredicted RBP3.24□□□□□ -1.89
GABPB1-209ENST00000559100 GJB6O95452 261 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 MX2P20592 715 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 ADH6P28332 368 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 CDC27P30260 824 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 GIPRP48546 466 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 ARL4DP49703 201 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 RPL6Q02878 288 aaKnown RBP3.24□□□□□ -1.89
GABPB1-209ENST00000559100 PDE3AQ14432 1141 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 RASA3Q14644 834 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 ZNF423Q2M1K9 1284 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 PERM1Q5SV97 790 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 TXNDC11Q6PKC3 985 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 RUFY4Q6ZNE9 571 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 SV2AQ7L0J3 742 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 LRP10Q7Z4F1 713 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 VN1R5Q7Z5H4 357 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 CD163Q86VB7 1156 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 LSRQ86X29 649 aaPredicted RBP3.24□□□□□ -1.89
GABPB1-209ENST00000559100 IL22RA1Q8N6P7 574 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 STK35Q8TDR2 534 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 NUDT8Q8WV74 236 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 CORO1BQ9BR76 489 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 CCDC113Q9H0I3 377 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 SPC25Q9HBM1 224 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 HCN2Q9UL51 889 aa3.24□□□□□ -1.89
GABPB1-209ENST00000559100 NSFL1CQ9UNZ2 370 aaKnown RBP3.24□□□□□ -1.89
GABPB1-209ENST00000559100 ESYT3A0FGR9 886 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 FAM86C2PA6NEL3 165 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 RAB11FIP3O75154 756 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 CYP11A1P05108 521 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 GSTP1P09211 210 aaKnown RBP3.23□□□□□ -1.89
GABPB1-209ENST00000559100 ESRRAP11474 423 aaPredicted RBP3.23□□□□□ -1.89
GABPB1-209ENST00000559100 ALAS2P22557 587 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 SRSF11Q05519 484 aaKnown RBP3.23□□□□□ -1.89
GABPB1-209ENST00000559100 LRRFIP1Q32MZ4 808 aaKnown RBP3.23□□□□□ -1.89
GABPB1-209ENST00000559100 WIPI1Q5MNZ9 446 aaPredicted RBP3.23□□□□□ -1.89
GABPB1-209ENST00000559100 PSAPL1Q6NUJ1 521 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.23□□□□□ -1.89
GABPB1-209ENST00000559100 HDXQ7Z353 690 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 LILRB2Q8N423 598 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 MICAL1Q8TDZ2 1067 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 GAL3ST3Q96A11 431 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 ELMO3Q96BJ8 720 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 GPATCH3Q96I76 525 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 TNKS2Q9H2K2 1166 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 JPH1Q9HDC5 661 aaPredicted RBP3.23□□□□□ -1.89
GABPB1-209ENST00000559100 IFT57Q9NWB7 429 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 KLHL3Q9UH77 587 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 NAGPAQ9UK23 515 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 SOX13Q9UN79 622 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 NOP58Q9Y2X3 529 aaKnown RBP3.23□□□□□ -1.89
GABPB1-209ENST00000559100 COL4A3BPQ9Y5P4 624 aa3.23□□□□□ -1.89
GABPB1-209ENST00000559100 KDM2BQ8NHM5 1336 aa3.22□□□□□ -1.89
GABPB1-209ENST00000559100 PRAMEF27A3QJZ7 478 aa3.22□□□□□ -1.89
GABPB1-209ENST00000559100 NEURL1BA8MQ27 555 aa3.22□□□□□ -1.89
GABPB1-209ENST00000559100 B2RBV5 119 aa3.22□□□□□ -1.89
GABPB1-209ENST00000559100 H3BRJ5 948 aa3.22□□□□□ -1.89
GABPB1-209ENST00000559100 LINC01387J3KSC0 135 aa3.22□□□□□ -1.89
GABPB1-209ENST00000559100 MARCH6O60337 910 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms