RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 NFIAQ12857 509 aa13.99□□□□□ -0.17
CHRNA3-205ENST00000559080 PARK7Q99497 189 aaKnown RBP13.99□□□□□ -0.17
CHRNA3-205ENST00000559080 USP44Q9H0E7 712 aa13.99□□□□□ -0.17
CHRNA3-205ENST00000559080 STAP2Q9UGK3 403 aa13.99□□□□□ -0.17
CHRNA3-205ENST00000559080 ATRNL1Q5VV63 1379 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 CXCL11O14625 94 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 ADCY3O60266 1144 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 EVI5O60447 810 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 ELNP15502 786 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 FGFR2P21802 821 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 FLT3LGP49771 235 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 METTL24Q5JXM2 366 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 CDC42EP5Q6NZY7 148 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 PXYLP1Q8TE99 480 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 CRISPLD2Q9H0B8 497 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 PAK6Q9NQU5 681 aaPredicted RBP13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 FAM198AQ9UFP1 575 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 DAGLAQ9Y4D2 1042 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 LOC285556D6RIA3 1793 aa13.98□□□□□ -0.17
CHRNA3-205ENST00000559080 PHF20L1A8MW92 1017 aa13.97□□□□□ -0.17
CHRNA3-205ENST00000559080 INHAP05111 366 aa13.97□□□□□ -0.17
CHRNA3-205ENST00000559080 IRF5Q13568 498 aa13.97□□□□□ -0.17
CHRNA3-205ENST00000559080 ZFPM1Q8IX07 1006 aa13.97□□□□□ -0.17
CHRNA3-205ENST00000559080 KLHDC4Q8TBB5 520 aa13.97□□□□□ -0.17
CHRNA3-205ENST00000559080 DEFB118Q96PH6 123 aa13.97□□□□□ -0.17
CHRNA3-205ENST00000559080 GDF15Q99988 308 aa13.97□□□□□ -0.17
CHRNA3-205ENST00000559080 HDAC5Q9UQL6 1122 aa13.97□□□□□ -0.17
CHRNA3-205ENST00000559080 A0A0G2JLL6 359 aaPredicted RBP13.96□□□□□ -0.17
CHRNA3-205ENST00000559080 CAPN2P17655 700 aa13.96□□□□□ -0.17
CHRNA3-205ENST00000559080 DIXDC1Q155Q3 683 aa13.96□□□□□ -0.17
CHRNA3-205ENST00000559080 PRRT2Q7Z6L0 340 aaPredicted RBP13.96□□□□□ -0.17
CHRNA3-205ENST00000559080 IPO8O15397 1037 aaKnown RBP13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 TFRCP02786 760 aaKnown RBP13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 PRDX5P30044 214 aa13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 BMP8BP34820 402 aa13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 WDR66Q8TBY9 1149 aa13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 DIS3LQ8TF46 1054 aaKnown RBP13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 ARHGAP45Q92619 1136 aa13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 PAWRQ96IZ0 340 aaKnown RBP13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 AFG3L2Q9Y4W6 797 aa13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 A0A0C4DFX4 3053 aa13.95□□□□□ -0.18
CHRNA3-205ENST00000559080 FRMPD3Q5JV73 1810 aa13.94□□□□□ -0.18
CHRNA3-205ENST00000559080 PTPRAP18433 802 aa13.94□□□□□ -0.18
CHRNA3-205ENST00000559080 MAP3K10Q02779 954 aa13.94□□□□□ -0.18
CHRNA3-205ENST00000559080 GPR153Q6NV75 609 aa13.94□□□□□ -0.18
CHRNA3-205ENST00000559080 FASTKD5Q7L8L6 764 aaKnown RBP13.94□□□□□ -0.18
CHRNA3-205ENST00000559080 SCYL3Q8IZE3 742 aa13.94□□□□□ -0.18
CHRNA3-205ENST00000559080 FRAT1Q92837 279 aaPredicted RBP13.94□□□□□ -0.18
CHRNA3-205ENST00000559080 SLC45A1Q9Y2W3 748 aa13.94□□□□□ -0.18
CHRNA3-205ENST00000559080 ZHX2Q9Y6X8 837 aa13.94□□□□□ -0.18
CHRNA3-205ENST00000559080 TNPO2O14787 897 aaKnown RBP13.93□□□□□ -0.18
CHRNA3-205ENST00000559080 IFIT1P09914 478 aaKnown RBP13.93□□□□□ -0.18
CHRNA3-205ENST00000559080 SLURP2P0DP57 97 aa13.93□□□□□ -0.18
CHRNA3-205ENST00000559080 PUM3Q15397 648 aaKnown RBP13.93□□□□□ -0.18
CHRNA3-205ENST00000559080 SH3BP5LQ7L8J4 393 aa13.93□□□□□ -0.18
CHRNA3-205ENST00000559080 LRRFIP2Q9Y608 721 aaKnown RBP13.93□□□□□ -0.18
CHRNA3-205ENST00000559080 RFX7Q2KHR2 1363 aa13.93□□□□□ -0.18
CHRNA3-205ENST00000559080 ZBED9Q6R2W3 1325 aa13.92□□□□□ -0.18
CHRNA3-205ENST00000559080 EYA2O00167 538 aa13.92□□□□□ -0.18
CHRNA3-205ENST00000559080 RFX5P48382 616 aaPredicted RBP13.92□□□□□ -0.18
CHRNA3-205ENST00000559080 ATF7IPQ6VMQ6 1270 aa13.92□□□□□ -0.18
CHRNA3-205ENST00000559080 GADL1Q6ZQY3 521 aa13.92□□□□□ -0.18
CHRNA3-205ENST00000559080 NECAB2Q7Z6G3 386 aa13.92□□□□□ -0.18
CHRNA3-205ENST00000559080 MEIS3Q99687 375 aa13.92□□□□□ -0.18
CHRNA3-205ENST00000559080 IDI2Q9BXS1 227 aa13.92□□□□□ -0.18
CHRNA3-205ENST00000559080 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHRNA3-205ENST00000559080 USP40Q9NVE5 1235 aa13.92□□□□□ -0.18
CHRNA3-205ENST00000559080 CDK5RAP2Q96SN8 1893 aa13.91□□□□□ -0.18
CHRNA3-205ENST00000559080 GNAI3P08754 354 aa13.91□□□□□ -0.18
CHRNA3-205ENST00000559080 TRIM27P14373 513 aa13.91□□□□□ -0.18
CHRNA3-205ENST00000559080 Q7L0L9 218 aa13.91□□□□□ -0.18
CHRNA3-205ENST00000559080 DEFB123Q8N688 67 aa13.91□□□□□ -0.18
CHRNA3-205ENST00000559080 ANKRD13CQ8N6S4 541 aa13.91□□□□□ -0.18
CHRNA3-205ENST00000559080 LPIN2Q92539 896 aa13.91□□□□□ -0.18
CHRNA3-205ENST00000559080 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.91□□□□□ -0.18
CHRNA3-205ENST00000559080 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
CHRNA3-205ENST00000559080 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 SIPA1L1O43166 1804 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 DDTLA6NHG4 134 aaPredicted RBP13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 ENTPD3O75355 529 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 BCAR3O75815 825 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 SLC5A1P13866 664 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 RGS3P49796 1198 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 LRIT3Q3SXY7 679 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 ATG9AQ7Z3C6 839 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 CCDC84Q86UT8 332 aaPredicted RBP13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 C7orf61Q8IZ16 206 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 ANKLE1Q8NAG6 615 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 SMCR8Q8TEV9 937 aaPredicted RBP13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 SIL1Q9H173 461 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 PICK1Q9NRD5 415 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 ZMYND8Q9ULU4 1186 aaPredicted RBP13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 AGTPBP1Q9UPW5 1226 aa13.9□□□□□ -0.18
CHRNA3-205ENST00000559080 CTNND1O60716 968 aaKnown RBP13.89□□□□□ -0.19
CHRNA3-205ENST00000559080 CIAO1O76071 339 aa13.89□□□□□ -0.19
CHRNA3-205ENST00000559080 LDHBP07195 334 aaKnown RBP13.89□□□□□ -0.19
CHRNA3-205ENST00000559080 FAM110CQ1W6H9 321 aa13.89□□□□□ -0.19
CHRNA3-205ENST00000559080 TREML2Q5T2D2 321 aa13.89□□□□□ -0.19
CHRNA3-205ENST00000559080 ZKSCAN2Q63HK3 967 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms