RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TMTC2Q8N394 836 aa16.2■□□□□ 0.18
TPM1-215ENST00000558868 FBXW7Q969H0 707 aa16.2■□□□□ 0.18
TPM1-215ENST00000558868 SPON1Q9HCB6 807 aa16.2■□□□□ 0.18
TPM1-215ENST00000558868 DCP1AQ9NPI6 582 aaPredicted RBP16.2■□□□□ 0.18
TPM1-215ENST00000558868 TOMM22Q9NS69 142 aa16.2■□□□□ 0.18
TPM1-215ENST00000558868 NAP1L2Q9ULW6 460 aaPredicted RBP16.2■□□□□ 0.18
TPM1-215ENST00000558868 ZDHHC9Q9Y397 364 aa16.2■□□□□ 0.18
TPM1-215ENST00000558868 ATP6V1DQ9Y5K8 247 aa16.2■□□□□ 0.18
TPM1-215ENST00000558868 GAKO14976 1311 aa16.19■□□□□ 0.18
TPM1-215ENST00000558868 KLF18A0A0U1RQI7 1052 aa16.19■□□□□ 0.18
TPM1-215ENST00000558868 SYT1P21579 422 aa16.19■□□□□ 0.18
TPM1-215ENST00000558868 LIFRP42702 1097 aa16.19■□□□□ 0.18
TPM1-215ENST00000558868 SCRN1Q12765 414 aa16.19■□□□□ 0.18
TPM1-215ENST00000558868 DOK7Q18PE1 504 aa16.19■□□□□ 0.18
TPM1-215ENST00000558868 CTR9Q6PD62 1173 aa16.19■□□□□ 0.18
TPM1-215ENST00000558868 CYB5R4Q7L1T6 521 aa16.19■□□□□ 0.18
TPM1-215ENST00000558868 VPS33BQ9H267 617 aa16.19■□□□□ 0.18
TPM1-215ENST00000558868 MYH2Q9UKX2 1941 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 USP17L12C9JPN9 530 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 USP17L21D6R901 530 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 IFIT3O14879 490 aaKnown RBP16.18■□□□□ 0.18
TPM1-215ENST00000558868 KDM4AO75164 1064 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 FGRP09769 529 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 ZSCAN22P10073 491 aaPredicted RBP16.18■□□□□ 0.18
TPM1-215ENST00000558868 BTDP43251 543 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 PDE4BQ07343 736 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 KIAA2012Q0VF49 1180 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 PKP1Q13835 747 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 DIXDC1Q155Q3 683 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 SKOR2Q2VWA4 1001 aaPredicted RBP16.18■□□□□ 0.18
TPM1-215ENST00000558868 TMEM67Q5HYA8 995 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 RRP12Q5JTH9 1297 aaKnown RBP16.18■□□□□ 0.18
TPM1-215ENST00000558868 STRIP1Q5VSL9 837 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 LARP1BQ659C4 914 aaKnown RBP16.18■□□□□ 0.18
TPM1-215ENST00000558868 SYNE3Q6ZMZ3 975 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 SGMS1Q86VZ5 419 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 SMARCC2Q8TAQ2 1214 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 SH3RF3Q8TEJ3 882 aaPredicted RBP16.18■□□□□ 0.18
TPM1-215ENST00000558868 ZSWIM5Q9P217 1185 aa16.18■□□□□ 0.18
TPM1-215ENST00000558868 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
TPM1-215ENST00000558868 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 GOLGA8BA8MQT2 603 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 ORC4O43929 436 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 DPEP1P16444 411 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 GRIK5Q16478 980 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 CPLX2Q6PUV4 134 aaKnown RBP16.17■□□□□ 0.18
TPM1-215ENST00000558868 NFXL1Q6ZNB6 911 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 FAM184AQ8NB25 1140 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 IGDCC4Q8TDY8 1250 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 PSMD1Q99460 953 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 UBAC1Q9BSL1 405 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 MRIQ9BWK5 157 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 MCM9Q9NXL9 1143 aa16.17■□□□□ 0.18
TPM1-215ENST00000558868 CCDC69A6NI79 296 aa16.16■□□□□ 0.18
TPM1-215ENST00000558868 C21orf2O43822 256 aa16.16■□□□□ 0.18
TPM1-215ENST00000558868 ECE2O60344 883 aa16.16■□□□□ 0.18
TPM1-215ENST00000558868 CDKL5O76039 1030 aa16.16■□□□□ 0.18
TPM1-215ENST00000558868 ZBTB7AO95365 584 aa16.16■□□□□ 0.18
TPM1-215ENST00000558868 RCAN1P53805 252 aa16.16■□□□□ 0.18
TPM1-215ENST00000558868 HHIPL2Q6UWX4 724 aa16.16■□□□□ 0.18
TPM1-215ENST00000558868 TEX11Q8IYF3 940 aa16.16■□□□□ 0.18
TPM1-215ENST00000558868 ZNF287Q9HBT7 754 aa16.16■□□□□ 0.18
TPM1-215ENST00000558868 LAMB1P07942 1786 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 USP17L3A6NCW0 530 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 USP17L4A6NCW7 530 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 CPLX1O14810 134 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 CCT2P78371 535 aaKnown RBP16.15■□□□□ 0.18
TPM1-215ENST00000558868 HDLBPQ00341 1268 aaKnown RBP16.15■□□□□ 0.18
TPM1-215ENST00000558868 WTAPQ15007 396 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 CCDC178Q5BJE1 867 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 C12orf60Q5U649 245 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 USP17L1Q7RTZ2 530 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 IQCA1Q86XH1 822 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 NSUN7Q8NE18 718 aaKnown RBP16.15■□□□□ 0.18
TPM1-215ENST00000558868 SNED1Q8TER0 1413 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 DBNDD1Q9H9R9 158 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 LY9Q9HBG7 655 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
TPM1-215ENST00000558868 BRPF3Q9ULD4 1205 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 TTF2Q9UNY4 1162 aaKnown RBP16.15■□□□□ 0.18
TPM1-215ENST00000558868 SLC12A7Q9Y666 1083 aa16.15■□□□□ 0.18
TPM1-215ENST00000558868 BAZ2AQ9UIF9 1905 aaKnown RBP16.14■□□□□ 0.17
TPM1-215ENST00000558868 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 ZBTB43O43298 467 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 PPIP5K2O43314 1243 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 F13A1P00488 732 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
TPM1-215ENST00000558868 KCNA3P22001 575 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 METAP2P50579 478 aaKnown RBP eCLIP16.14■□□□□ 0.17
TPM1-215ENST00000558868 MCTP1Q6DN14 999 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 RGS22Q8NE09 1264 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 TGFBRAP1Q8WUH2 860 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 TEKT1Q969V4 418 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 INCENPQ9NQS7 918 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 GPHNQ9NQX3 736 aaPredicted RBP16.14■□□□□ 0.17
TPM1-215ENST00000558868 PCDH10Q9P2E7 1040 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 MTMR6Q9Y217 621 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
TPM1-215ENST00000558868 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms