RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 CHRNA5P30532 468 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 ESR2Q92731 530 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 ALG1Q9BT22 464 aa12.62□□□□□ -0.39
CSPG4P5-201ENST00000558731 ESPNB1AK53 854 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 SPTY2D1Q68D10 685 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 TTC6Q86TZ1 520 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 CKAP2LQ8IYA6 745 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 IL17RAQ96F46 866 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 DBNDD1Q9H9R9 158 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 CLCN1P35523 988 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 APOA5Q6Q788 366 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 CNNM2Q9H8M5 875 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 LEMD3Q9Y2U8 911 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 NMT2O60551 498 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 IQCA1Q86XH1 822 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 DYNLL2Q96FJ2 89 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 ZNF274Q96GC6 653 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 CD209Q9NNX6 404 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 COL4A1P02462 1669 aa12.61□□□□□ -0.39
CSPG4P5-201ENST00000558731 C2CD5Q86YS7 1000 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 WDR66Q8TBY9 1149 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 POLLQ9UGP5 575 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 STX8Q9UNK0 236 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 SPEF2Q9C093 1822 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 IFIT1BQ5T764 474 aaKnown RBP12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 STK32BQ9NY57 414 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 TNKSO95271 1327 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 SH2B2O14492 632 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 BAG3O95817 575 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 SLC3A2P08195 630 aaKnown RBP12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 UBE2HP62256 183 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 STK38Q15208 465 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 RTN1Q16799 776 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 SH3RF3Q8TEJ3 882 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 ANKRD36CQ5JPF3 1778 aa12.6□□□□□ -0.39
CSPG4P5-201ENST00000558731 CDC27P30260 824 aa12.59□□□□□ -0.39
CSPG4P5-201ENST00000558731 SLC44A5Q8NCS7 719 aa12.59□□□□□ -0.39
CSPG4P5-201ENST00000558731 BBOX1O75936 387 aa12.59□□□□□ -0.39
CSPG4P5-201ENST00000558731 ATP2B4P23634 1241 aa12.59□□□□□ -0.39
CSPG4P5-201ENST00000558731 TEX11Q8IYF3 940 aa12.59□□□□□ -0.39
CSPG4P5-201ENST00000558731 TRIM22Q8IYM9 498 aa12.59□□□□□ -0.39
CSPG4P5-201ENST00000558731 TBC1D16Q8TBP0 767 aa12.59□□□□□ -0.39
CSPG4P5-201ENST00000558731 PDGFDQ9GZP0 370 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P5-201ENST00000558731 ZNF384Q8TF68 577 aa12.59□□□□□ -0.39
CSPG4P5-201ENST00000558731 BAZ2BQ9UIF8 2168 aaKnown RBP12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 BTDP43251 543 aa12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 TMEM87BQ96K49 555 aa12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 KCNJ14Q9UNX9 436 aa12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 H0YIN7 160 aa12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 CDKL5O76039 1030 aa12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 PTMAP06454 111 aaKnown RBP12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 RBM10P98175 930 aaKnown RBP12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 SSRP1Q08945 709 aaKnown RBP12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 CLEC17AQ6ZS10 378 aa12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 RIOK1Q9BRS2 568 aaKnown RBP12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 SCAND2PQ9GZW5 306 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 TACC3Q9Y6A5 838 aa12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 COL1A1P02452 1464 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 KIAA0825Q8IV33 1275 aa12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 ZSCAN29Q8IWY8 852 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 LLPHQ9BRT6 129 aaKnown RBP12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 DCP1AQ9NPI6 582 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P5-201ENST00000558731 SRCAPQ6ZRS2 3230 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 LIG1P18858 919 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 MARCKSP29966 332 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 PDE4BQ07343 736 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 CTR9Q6PD62 1173 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 LEO1Q8WVC0 666 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 USP28Q96RU2 1077 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 RBSNQ9H1K0 784 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 TSPY26PQ9H489 355 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 LY9Q9HBG7 655 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 CFAP45Q9UL16 551 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 HPS5Q9UPZ3 1129 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 SEMA3EO15041 775 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 MSNP26038 577 aaKnown RBP12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 CATIPQ7Z7H3 387 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 ZNF654Q8IZM8 581 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 ZNF444Q8N0Y2 327 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 TTF2Q9UNY4 1162 aaKnown RBP12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 MYO5AQ9Y4I1 1855 aaKnown RBP12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 LDHCP07864 332 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 FDPSP14324 419 aaKnown RBP12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 PDE6BP35913 854 aa12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 ERCC4Q92889 916 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P5-201ENST00000558731 PNPLA7Q6ZV29 1317 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 SAFBQ15424 915 aaKnown RBP eCLIP12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 ZNF396Q96N95 335 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 BRIP1Q9BX63 1249 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 ALDH8A1Q9H2A2 487 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 TSPY3P0CV98 308 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 TSPY8P0CW00 308 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 TFAP4Q01664 338 aa12.56□□□□□ -0.4
CSPG4P5-201ENST00000558731 TCP10Q12799 353 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms