RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 SAMM50Q9Y512 469 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 USP31Q70CQ4 1352 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 PRR19A6NJB7 356 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 F13BP05160 661 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 NTF4P34130 210 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 ERVK-24P63145 666 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 RING1Q06587 406 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 MRPL58Q14197 206 aaKnown RBP4.88□□□□□ -1.63
HERC1-203ENST00000558532 TTLL4Q14679 1199 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 LRRC14Q15048 493 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 TAF1CQ15572 869 aaPredicted RBP4.88□□□□□ -1.63
HERC1-203ENST00000558532 NFKBIBQ15653 356 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 SCARA3Q6AZY7 606 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 PAOXQ6QHF9 649 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 Q8N3U1 123 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 ACSBG1Q96GR2 724 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 YIPF2Q9BWQ6 316 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 C1GALT1Q9NS00 363 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 VTI1BQ9UEU0 232 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 DAGLAQ9Y4D2 1042 aa4.88□□□□□ -1.63
HERC1-203ENST00000558532 HCLS1P14317 486 aaPredicted RBP4.87□□□□□ -1.63
HERC1-203ENST00000558532 ZNF16P17020 682 aaPredicted RBP4.87□□□□□ -1.63
HERC1-203ENST00000558532 LIG3P49916 1009 aa4.87□□□□□ -1.63
HERC1-203ENST00000558532 RPS26P62854 115 aaKnown RBP4.87□□□□□ -1.63
HERC1-203ENST00000558532 HNRNPUQ00839 825 aaKnown RBP eCLIP4.87□□□□□ -1.63
HERC1-203ENST00000558532 MAP7Q14244 749 aa4.87□□□□□ -1.63
HERC1-203ENST00000558532 MAP3K11Q16584 847 aa4.87□□□□□ -1.63
HERC1-203ENST00000558532 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.87□□□□□ -1.63
HERC1-203ENST00000558532 AGMOQ6ZNB7 445 aa4.87□□□□□ -1.63
HERC1-203ENST00000558532 ZAR1Q86SH2 424 aa4.87□□□□□ -1.63
HERC1-203ENST00000558532 NOC4LQ9BVI4 516 aaKnown RBP4.87□□□□□ -1.63
HERC1-203ENST00000558532 MRS2Q9HD23 443 aa4.87□□□□□ -1.63
HERC1-203ENST00000558532 PCDHB5Q9Y5E4 795 aa4.87□□□□□ -1.63
HERC1-203ENST00000558532 CSADQ9Y600 493 aa4.87□□□□□ -1.63
HERC1-203ENST00000558532 DCDC2CA8MYV0 355 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 WDR64B1ANS9 1081 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 MED26O95402 600 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 TFE3P19532 575 aaPredicted RBP4.86□□□□□ -1.63
HERC1-203ENST00000558532 CD97P48960 835 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 CDK8P49336 464 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 LRP8Q14114 963 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 SEPT6Q14141 434 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 INPP5AQ14642 412 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 PPM1JQ5JR12 505 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 ARTNQ5T4W7 220 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 LRFN4Q6PJG9 635 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 UBE3DQ7Z6J8 389 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 SMYD4Q8IYR2 804 aaPredicted RBP4.86□□□□□ -1.63
HERC1-203ENST00000558532 FBXL6Q8N531 539 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 RNF214Q8ND24 703 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 ISL2Q96A47 359 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 TBC1D32Q96NH3 1257 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 PIDD1Q9HB75 910 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 LGR6Q9HBX8 967 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 PCDHA4Q9UN74 947 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 TLR6Q9Y2C9 796 aa4.86□□□□□ -1.63
HERC1-203ENST00000558532 SCO2A0A1W2PP80 73 aa4.85□□□□□ -1.63
HERC1-203ENST00000558532 FAM170BA6NMN3 283 aa4.85□□□□□ -1.63
HERC1-203ENST00000558532 LDLRAD1Q5T700 205 aa4.85□□□□□ -1.63
HERC1-203ENST00000558532 C12orf40Q86WS4 652 aa4.85□□□□□ -1.63
HERC1-203ENST00000558532 PHC3Q8NDX5 983 aa4.85□□□□□ -1.63
HERC1-203ENST00000558532 PLPPR2Q96GM1 343 aa4.85□□□□□ -1.63
HERC1-203ENST00000558532 ABCC9O60706 1549 aa4.84□□□□□ -1.63
HERC1-203ENST00000558532 KIAA1324LA8MWY0 1029 aaPredicted RBP4.84□□□□□ -1.63
HERC1-203ENST00000558532 F6X3S4 739 aa4.84□□□□□ -1.63
HERC1-203ENST00000558532 HYAL3O43820 417 aaPredicted RBP4.84□□□□□ -1.63
HERC1-203ENST00000558532 RNGTTO60942 597 aaKnown RBP4.84□□□□□ -1.63
HERC1-203ENST00000558532 HOXA10P31260 410 aaPredicted RBP4.84□□□□□ -1.63
HERC1-203ENST00000558532 SSTR4P31391 388 aa4.84□□□□□ -1.63
HERC1-203ENST00000558532 CDK5R2Q13319 367 aa4.84□□□□□ -1.63
HERC1-203ENST00000558532 CPSF6Q16630 551 aaKnown RBP eCLIP4.84□□□□□ -1.63
HERC1-203ENST00000558532 ZNF326Q5BKZ1 582 aaKnown RBP4.84□□□□□ -1.63
HERC1-203ENST00000558532 ZBTB37Q5TC79 503 aa4.84□□□□□ -1.63
HERC1-203ENST00000558532 ZNF765Q7L2R6 523 aa4.84□□□□□ -1.63
HERC1-203ENST00000558532 CYFIP1Q7L576 1253 aa4.84□□□□□ -1.63
HERC1-203ENST00000558532 RHOVQ96L33 236 aa4.84□□□□□ -1.63
HERC1-203ENST00000558532 PSMG3-AS1Q96PY0 264 aa4.84□□□□□ -1.63
HERC1-203ENST00000558532 RLBP1P12271 317 aa4.83□□□□□ -1.64
HERC1-203ENST00000558532 SPINK2P20155 84 aa4.83□□□□□ -1.64
HERC1-203ENST00000558532 WIPI1Q5MNZ9 446 aaPredicted RBP4.83□□□□□ -1.64
HERC1-203ENST00000558532 XP32Q5T750 250 aa4.83□□□□□ -1.64
HERC1-203ENST00000558532 ELMO3Q96BJ8 720 aa4.83□□□□□ -1.64
HERC1-203ENST00000558532 METTL22Q9BUU2 404 aaPredicted RBP4.83□□□□□ -1.64
HERC1-203ENST00000558532 OSBPL1AQ9BXW6 950 aa4.83□□□□□ -1.64
HERC1-203ENST00000558532 ZFP64Q9NPA5 681 aa4.83□□□□□ -1.64
HERC1-203ENST00000558532 PIM2Q9P1W9 311 aa4.83□□□□□ -1.64
HERC1-203ENST00000558532 PCOLCE2Q9UKZ9 415 aa4.83□□□□□ -1.64
HERC1-203ENST00000558532 RBM47A0AV96 593 aaKnown RBP4.82□□□□□ -1.64
HERC1-203ENST00000558532 PRAMEF27A3QJZ7 478 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 GFRA2O00451 464 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 FANCGO15287 622 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 COBLO75128 1261 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 MSMPQ1L6U9 139 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 OGFOD3Q6PK18 319 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 ERMP1Q7Z2K6 904 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 GIMAP7Q8NHV1 300 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 MIR1-1HGQ9H1L0 117 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 FBRSQ9HAH7 460 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 ATG3Q9NT62 314 aa4.82□□□□□ -1.64
HERC1-203ENST00000558532 SNCAIPQ9Y6H5 919 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms