RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 BCL2L12Q9HB09 334 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 A1CFQ9NQ94 594 aaKnown RBP6.29□□□□□ -1.4
GABPB1-207ENST00000558335 SYNPO2Q9UMS6 1093 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 TBC1D2BQ9UPU7 963 aa6.29□□□□□ -1.4
GABPB1-207ENST00000558335 CDHR2Q9BYE9 1310 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 STK36Q9NRP7 1315 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 SALL1Q9NSC2 1324 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 RIOK3O14730 519 aaKnown RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 SPTLC2O15270 562 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 C21orf2O43822 256 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 PPFIA2O75334 1257 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 STARD3NLO95772 234 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 ANXA1P04083 346 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 PCCAP05165 728 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 SKILP12757 684 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 CPA1P15085 419 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 PDIA3P30101 505 aaKnown RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 ABCD1P33897 745 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 CASP7P55210 303 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 NLRP12P59046 1061 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 SCRN1Q12765 414 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 STK3Q13188 491 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 IFIT5Q13325 482 aaKnown RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 IQCB1Q15051 598 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 CAMK4Q16566 473 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 WWC2Q6AWC2 1192 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 MMS22LQ6ZRQ5 1243 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 DDX46Q7L014 1031 aaKnown RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 FILIP1Q7Z7B0 1213 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 ZNF589Q86UQ0 364 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 LUZP1Q86V48 1076 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 EFCAB13Q8IY85 973 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 CKAP2LQ8IYA6 745 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 TRIM22Q8IYM9 498 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 TRIML1Q8N9V2 468 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 IQUBQ8NA54 791 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 ZNF397Q8NF99 534 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 FBXO18Q8NFZ0 1043 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 HELBQ8NG08 1087 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 CXorf38Q8TB03 319 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 TCP11Q8WWU5 503 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 BORCS6Q96GS4 357 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 ZNF496Q96IT1 587 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 DBNDD2Q9BQY9 259 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 NACAP1Q9BZK3 213 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 KRT23Q9C075 422 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 DNAJC25Q9H1X3 360 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 RANBP17Q9H2T7 1088 aaKnown RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 CHCHD3Q9NX63 227 aaKnown RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 ETAA1Q9NY74 926 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 KIAA1468Q9P260 1216 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 TFIP11Q9UBB9 837 aaKnown RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 CHMP3Q9Y3E7 222 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 TJP1Q07157 1748 aa6.28□□□□□ -1.4
GABPB1-207ENST00000558335 DDX60Q8IY21 1712 aaKnown RBP6.28□□□□□ -1.4
GABPB1-207ENST00000558335 SYNRGQ9UMZ2 1314 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 ERICH2A1L162 156 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 SPDYE4A6NLX3 237 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 MYO1CO00159 1063 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 CUTAO60888 179 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 SLU7O95391 586 aaKnown RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 CPP00450 1065 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 PCP11498 1178 aaKnown RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 RDXP35241 583 aaKnown RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 PRPHP41219 470 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 FOXO4P98177 505 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 ST3GAL1Q11201 340 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 SNW1Q13573 536 aaKnown RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 RBBP5Q15291 538 aaKnown RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 UBE3CQ15386 1083 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 ALX1Q15699 326 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 WASHC4Q2M389 1173 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 GJC2Q5T442 439 aaPredicted RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 WDR78Q5VTH9 848 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 EP400NLQ6ZTU2 488 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 FMR1NBQ8N0W7 255 aaPredicted RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 LINC00301Q8NCQ3 95 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 ENGASEQ8NFI3 743 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 GOLGA5Q8TBA6 731 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 ZCRB1Q8TBF4 217 aaKnown RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 PGBD1Q96JS3 809 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 RMDN2Q96LZ7 410 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 KCNF1Q9H3M0 494 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 RNF41Q9H4P4 317 aaPredicted RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 VEZTQ9HBM0 779 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 PSD3Q9NYI0 1048 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 ORC3Q9UBD5 711 aaPredicted RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 ANGEL1Q9UNK9 670 aaKnown RBP6.27□□□□□ -1.41
GABPB1-207ENST00000558335 FRMD4BQ9Y2L6 1034 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 MYH3P11055 1940 aa6.27□□□□□ -1.41
GABPB1-207ENST00000558335 PHLPP2Q6ZVD8 1323 aa6.26□□□□□ -1.41
GABPB1-207ENST00000558335 WDR17Q8IZU2 1322 aa6.26□□□□□ -1.41
GABPB1-207ENST00000558335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.26□□□□□ -1.41
GABPB1-207ENST00000558335 FAM237AA0A1B0GTK4 181 aa6.26□□□□□ -1.41
GABPB1-207ENST00000558335 CCDC69A6NI79 296 aa6.26□□□□□ -1.41
GABPB1-207ENST00000558335 GOLGA8BA8MQT2 603 aa6.26□□□□□ -1.41
GABPB1-207ENST00000558335 POTEB2H3BUK9 544 aa6.26□□□□□ -1.41
GABPB1-207ENST00000558335 PRC1O43663 620 aa6.26□□□□□ -1.41
GABPB1-207ENST00000558335 SMC2O95347 1197 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms