RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 TTC41PQ6P2S7 1318 aa11.02□□□□□ -0.65
CHD8-214ENST00000557727 F8W031 263 aaPredicted RBP11.01□□□□□ -0.65
CHD8-214ENST00000557727 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
CHD8-214ENST00000557727 MX1P20591 662 aa11.01□□□□□ -0.65
CHD8-214ENST00000557727 PDE1AP54750 535 aa11.01□□□□□ -0.65
CHD8-214ENST00000557727 TBC1D10BQ4KMP7 808 aaPredicted RBP11.01□□□□□ -0.65
CHD8-214ENST00000557727 PLEKHM2Q8IWE5 1019 aa11.01□□□□□ -0.65
CHD8-214ENST00000557727 HAUS7Q99871 368 aa11.01□□□□□ -0.65
CHD8-214ENST00000557727 MRIQ9BWK5 157 aa11.01□□□□□ -0.65
CHD8-214ENST00000557727 TTF2Q9UNY4 1162 aaKnown RBP11.01□□□□□ -0.65
CHD8-214ENST00000557727 PCDHGA10Q9Y5H3 936 aa11.01□□□□□ -0.65
CHD8-214ENST00000557727 GAKO14976 1311 aa11.01□□□□□ -0.65
CHD8-214ENST00000557727 DDX60LQ5H9U9 1706 aaKnown RBP11.01□□□□□ -0.65
CHD8-214ENST00000557727 PAPPA2Q9BXP8 1791 aa11□□□□□ -0.65
CHD8-214ENST00000557727 SIPA1L1O43166 1804 aa11□□□□□ -0.65
CHD8-214ENST00000557727 PPP1R3GB7ZBB8 358 aa11□□□□□ -0.65
CHD8-214ENST00000557727 WNT10BO00744 389 aa11□□□□□ -0.65
CHD8-214ENST00000557727 NEFLP07196 543 aa11□□□□□ -0.65
CHD8-214ENST00000557727 LMOD1P29536 600 aaPredicted RBP11□□□□□ -0.65
CHD8-214ENST00000557727 MMP14P50281 582 aa11□□□□□ -0.65
CHD8-214ENST00000557727 HDLBPQ00341 1268 aaKnown RBP11□□□□□ -0.65
CHD8-214ENST00000557727 MECOMQ03112 1051 aa11□□□□□ -0.65
CHD8-214ENST00000557727 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
CHD8-214ENST00000557727 KIF4BQ2VIQ3 1234 aa11□□□□□ -0.65
CHD8-214ENST00000557727 NBPF9Q3BBW0 867 aa11□□□□□ -0.65
CHD8-214ENST00000557727 USP50Q70EL3 339 aaPredicted RBP11□□□□□ -0.65
CHD8-214ENST00000557727 ADGRA1Q86SQ6 560 aa11□□□□□ -0.65
CHD8-214ENST00000557727 SKAP1Q86WV1 359 aa11□□□□□ -0.65
CHD8-214ENST00000557727 WNT2BQ93097 391 aa11□□□□□ -0.65
CHD8-214ENST00000557727 NSUN4Q96CB9 384 aaKnown RBP11□□□□□ -0.65
CHD8-214ENST00000557727 PRMT6Q96LA8 375 aaPredicted RBP11□□□□□ -0.65
CHD8-214ENST00000557727 BCL11AQ9H165 835 aa11□□□□□ -0.65
CHD8-214ENST00000557727 BOLA2Q9H3K6 86 aa11□□□□□ -0.65
CHD8-214ENST00000557727 OSBPL3Q9H4L5 887 aa11□□□□□ -0.65
CHD8-214ENST00000557727 SERPINA10Q9UK55 444 aa11□□□□□ -0.65
CHD8-214ENST00000557727 RFX7Q2KHR2 1363 aa11□□□□□ -0.65
CHD8-214ENST00000557727 H7C1D1 291 aa10.99□□□□□ -0.65
CHD8-214ENST00000557727 CHGBP05060 677 aa10.99□□□□□ -0.65
CHD8-214ENST00000557727 LDHBP07195 334 aaKnown RBP10.99□□□□□ -0.65
CHD8-214ENST00000557727 CRKP46108 304 aa10.99□□□□□ -0.65
CHD8-214ENST00000557727 CFAP100Q494V2 611 aa10.99□□□□□ -0.65
CHD8-214ENST00000557727 APOBEC3HQ6NTF7 200 aaKnown RBP10.99□□□□□ -0.65
CHD8-214ENST00000557727 HHIPL2Q6UWX4 724 aa10.99□□□□□ -0.65
CHD8-214ENST00000557727 CENPQQ7L2Z9 268 aaPredicted RBP10.99□□□□□ -0.65
CHD8-214ENST00000557727 ZDHHC15Q96MV8 337 aa10.99□□□□□ -0.65
CHD8-214ENST00000557727 DAGLAQ9Y4D2 1042 aa10.99□□□□□ -0.65
CHD8-214ENST00000557727 TCRBV5S4A2TA0A5A2 114 aa10.98□□□□□ -0.65
CHD8-214ENST00000557727 PNMA8AQ86V59 439 aaPredicted RBP10.98□□□□□ -0.65
CHD8-214ENST00000557727 LDHDQ86WU2 507 aa10.98□□□□□ -0.65
CHD8-214ENST00000557727 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
CHD8-214ENST00000557727 ZGPATQ8N5A5 531 aaKnown RBP10.98□□□□□ -0.65
CHD8-214ENST00000557727 PAG1Q9NWQ8 432 aa10.98□□□□□ -0.65
CHD8-214ENST00000557727 PPP4R2Q9NY27 417 aa10.98□□□□□ -0.65
CHD8-214ENST00000557727 ABCF2Q9UG63 623 aa10.98□□□□□ -0.65
CHD8-214ENST00000557727 MAST3O60307 1309 aa10.98□□□□□ -0.65
CHD8-214ENST00000557727 MYH1P12882 1939 aa10.97□□□□□ -0.65
CHD8-214ENST00000557727 BAZ2AQ9UIF9 1905 aaKnown RBP10.97□□□□□ -0.65
CHD8-214ENST00000557727 OTOFQ9HC10 1997 aa10.97□□□□□ -0.65
CHD8-214ENST00000557727 GOLIM4O00461 696 aa10.97□□□□□ -0.65
CHD8-214ENST00000557727 GLRX3O76003 335 aaKnown RBP10.97□□□□□ -0.65
CHD8-214ENST00000557727 TOMM70O94826 608 aa10.97□□□□□ -0.65
CHD8-214ENST00000557727 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
CHD8-214ENST00000557727 SLFNL1Q499Z3 407 aa10.97□□□□□ -0.65
CHD8-214ENST00000557727 EAPPQ56P03 285 aaPredicted RBP10.97□□□□□ -0.65
CHD8-214ENST00000557727 RBM26Q5T8P6 1007 aaKnown RBP10.97□□□□□ -0.65
CHD8-214ENST00000557727 ERICH6Q7L0X2 663 aa10.97□□□□□ -0.65
CHD8-214ENST00000557727 RBM46Q8TBY0 533 aaKnown RBP10.97□□□□□ -0.65
CHD8-214ENST00000557727 ZC3H15Q8WU90 426 aaKnown RBP10.97□□□□□ -0.65
CHD8-214ENST00000557727 TEKT1Q969V4 418 aa10.97□□□□□ -0.65
CHD8-214ENST00000557727 DNAJC2Q99543 621 aaKnown RBP10.97□□□□□ -0.65
CHD8-214ENST00000557727 HDAC9Q9UKV0 1011 aa10.97□□□□□ -0.65
CHD8-214ENST00000557727 MROH7-TTC4A0A0A0MT08 1334 aa10.97□□□□□ -0.65
CHD8-214ENST00000557727 NAV1Q8NEY1 1877 aa10.97□□□□□ -0.65
CHD8-214ENST00000557727 SSC5DA1L4H1 1573 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 CNTNAP1P78357 1384 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 PASKQ96RG2 1323 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 PITPNM2Q9BZ72 1349 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 GPR75-ASB3A0A0A6YYF3 556 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 IGSF3O75054 1194 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 RHBDL3P58872 404 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 CAMK2BQ13554 666 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 DLGAP5Q15398 846 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 MAP1SQ66K74 1059 aaPredicted RBP10.96□□□□□ -0.65
CHD8-214ENST00000557727 SPTY2D1Q68D10 685 aaPredicted RBP10.96□□□□□ -0.65
CHD8-214ENST00000557727 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 DLK2Q6UY11 383 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 CCDC136Q96JN2 1154 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 GGA3Q9NZ52 723 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 RABGEF1Q9UJ41 708 aa10.96□□□□□ -0.65
CHD8-214ENST00000557727 SCAF8Q9UPN6 1271 aaKnown RBP10.96□□□□□ -0.65
CHD8-214ENST00000557727 RGS20O76081 388 aa10.95□□□□□ -0.66
CHD8-214ENST00000557727 MAP4K4O95819 1239 aaPredicted RBP10.95□□□□□ -0.66
CHD8-214ENST00000557727 GSPT1P15170 499 aaKnown RBP10.95□□□□□ -0.66
CHD8-214ENST00000557727 PDE6AP16499 860 aa10.95□□□□□ -0.66
CHD8-214ENST00000557727 FMR1Q06787 632 aaKnown RBP eCLIP10.95□□□□□ -0.66
CHD8-214ENST00000557727 ANGEL2Q5VTE6 544 aaKnown RBP10.95□□□□□ -0.66
CHD8-214ENST00000557727 CDC42EP5Q6NZY7 148 aa10.95□□□□□ -0.66
CHD8-214ENST00000557727 DZIP1Q86YF9 867 aaKnown RBP10.95□□□□□ -0.66
CHD8-214ENST00000557727 KBTBD3Q8NAB2 608 aa10.95□□□□□ -0.66
CHD8-214ENST00000557727 GPATCH3Q96I76 525 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms