RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 NSUN7Q8NE18 718 aaKnown RBP11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 BAG1Q99933 345 aaPredicted RBP11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 ACBD3Q9H3P7 528 aa11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 A1CFQ9NQ94 594 aaKnown RBP11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 CDC23Q9UJX2 597 aa11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 PFKFB2O60825 505 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 ALDH1L1O75891 902 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 ERLIN2O94905 339 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 PRPF6O94906 941 aaKnown RBP11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 SLC3A2P08195 630 aaKnown RBP11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 NAT1P18440 290 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 HNRNPH1P31943 449 aaKnown RBP11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 MTX1Q13505 466 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 MFSD4BQ5TF39 518 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 KCNV1Q6PIU1 500 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 TACO1Q9BSH4 297 aaKnown RBP11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 NBPF3Q9H094 633 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 FAM204AQ9H8W3 233 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 VIPAS39Q9H9C1 493 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 SUGCTQ9HAC7 445 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 A0A0D9SFI3 127 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 A0A1B0GVL5 298 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 SHOX2O60902 331 aaPredicted RBP11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 PAX7P23759 505 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 USP8P40818 1118 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 GOLGA8FQ08AF8 430 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 GOLGA8DPQ0D2H9 430 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 ESCO1Q5FWF5 840 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 TOGARAM2Q6ZUX3 1019 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 CCDC12Q8WUD4 166 aaPredicted RBP11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 FMNL2Q96PY5 1086 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 WDR70Q9NW82 654 aa11.94□□□□□ -0.5
SUPT16H-207ENST00000557394 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 TMEM232C9JQI7 657 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 WDHD1O75717 1129 aaPredicted RBP11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 TRDNQ13061 729 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 PMM1Q92871 262 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 METTL14Q9HCE5 456 aaKnown RBP11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 INTS13Q9NVM9 706 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 TUBE1Q9UJT0 475 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 SALL1Q9NSC2 1324 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 CCDC189A1A4V9 331 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 C21orf2O43822 256 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 SERPINC1P01008 464 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 VSNL1P62760 191 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 MYL5Q02045 173 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 CFAP100Q494V2 611 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 PLEKHO1Q53GL0 409 aaPredicted RBP11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 Q6ZUG5 572 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 TC2NQ8N9U0 490 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 LINC00301Q8NCQ3 95 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 AFAP1L1Q8TED9 768 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 STAG1Q8WVM7 1258 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 CCDC102AQ96A19 550 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 NEK1Q96PY6 1258 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 PPP1R1BQ9UD71 204 aaPredicted RBP11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 USP54Q70EL1 1684 aa11.93□□□□□ -0.5
SUPT16H-207ENST00000557394 LRRIQ3A6PVS8 624 aaPredicted RBP11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 SMAPO00193 183 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 BIN1O00499 593 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 PES1O00541 588 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 RNF40O75150 1001 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 SYF2O95926 243 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 APLP1P51693 650 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 KCNA1Q09470 495 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 MTHFSDQ2M296 383 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 WWC2Q6AWC2 1192 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 TAF5LO75529 589 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 ZNF202O95125 648 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 YEATS4O95619 227 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 NBPF7P0C2Y1 421 aaPredicted RBP11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 NAP1L1P55209 391 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 WDR93Q6P2C0 686 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 CTCFLQ8NI51 663 aaPredicted RBP11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 KCNG4Q8TDN1 519 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 ORAI2Q96SN7 254 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 PLEKHA4Q9H4M7 779 aa11.92□□□□□ -0.5
SUPT16H-207ENST00000557394 PTPDC1A2A3K4 754 aa11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 FOXO3O43524 673 aa11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 MNAT1P51948 309 aa11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 ARPC5LQ9BPX5 153 aa11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 SPOCK3Q9BQ16 436 aa11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 MAF1Q9H063 256 aa11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 SUDS3Q9H7L9 328 aaPredicted RBP11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 ZSWIM4Q9H7M6 989 aa11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 MRPL44Q9H9J2 332 aaKnown RBP11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 PUF60Q9UHX1 559 aaKnown RBP11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 TRPM3Q9HCF6 1732 aaPredicted RBP11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 ZNF589Q86UQ0 364 aaPredicted RBP11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 CLIC6Q96NY7 704 aa11.91□□□□□ -0.5
SUPT16H-207ENST00000557394 PEAK1Q9H792 1746 aa11.9□□□□□ -0.5
SUPT16H-207ENST00000557394 PHACTR2O75167 634 aa11.9□□□□□ -0.5
SUPT16H-207ENST00000557394 LIG3P49916 1009 aa11.9□□□□□ -0.5
SUPT16H-207ENST00000557394 DDR1Q08345 913 aa11.9□□□□□ -0.5
SUPT16H-207ENST00000557394 KARSQ15046 597 aaKnown RBP11.9□□□□□ -0.5
SUPT16H-207ENST00000557394 PRPF38AQ8NAV1 312 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms