RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 SMCR8Q8TEV9 937 aaPredicted RBP12.74□□□□□ -0.37
RDH11-210ENST00000557331 CEP126Q9P2H0 1117 aa12.74□□□□□ -0.37
RDH11-210ENST00000557331 ZHX2Q9Y6X8 837 aa12.74□□□□□ -0.37
RDH11-210ENST00000557331 TNPO2O14787 897 aaKnown RBP12.73□□□□□ -0.37
RDH11-210ENST00000557331 ANP32CO43423 234 aa12.73□□□□□ -0.37
RDH11-210ENST00000557331 TFRCP02786 760 aaKnown RBP12.73□□□□□ -0.37
RDH11-210ENST00000557331 CTGFP29279 349 aa12.73□□□□□ -0.37
RDH11-210ENST00000557331 FLT3LGP49771 235 aa12.73□□□□□ -0.37
RDH11-210ENST00000557331 PABPC4Q13310 644 aaKnown RBP eCLIP12.73□□□□□ -0.37
RDH11-210ENST00000557331 CCDC184Q52MB2 194 aa12.73□□□□□ -0.37
RDH11-210ENST00000557331 GPAT2Q6NUI2 795 aa12.73□□□□□ -0.37
RDH11-210ENST00000557331 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
RDH11-210ENST00000557331 USP44Q9H0E7 712 aa12.73□□□□□ -0.37
RDH11-210ENST00000557331 SALL2Q9Y467 1007 aaPredicted RBP12.73□□□□□ -0.37
RDH11-210ENST00000557331 AFG3L2Q9Y4W6 797 aa12.73□□□□□ -0.37
RDH11-210ENST00000557331 COL6A3P12111 3177 aa12.72□□□□□ -0.37
RDH11-210ENST00000557331 PDS5AQ29RF7 1337 aaKnown RBP12.72□□□□□ -0.37
RDH11-210ENST00000557331 PHF20L1A8MW92 1017 aa12.72□□□□□ -0.37
RDH11-210ENST00000557331 TBC1D12O60347 775 aa12.72□□□□□ -0.37
RDH11-210ENST00000557331 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
RDH11-210ENST00000557331 CYP2C8P10632 490 aa12.72□□□□□ -0.37
RDH11-210ENST00000557331 PTPRAP18433 802 aa12.72□□□□□ -0.37
RDH11-210ENST00000557331 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
RDH11-210ENST00000557331 NECAB2Q7Z6G3 386 aa12.72□□□□□ -0.37
RDH11-210ENST00000557331 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
RDH11-210ENST00000557331 PAK6Q9NQU5 681 aaPredicted RBP12.72□□□□□ -0.37
RDH11-210ENST00000557331 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
RDH11-210ENST00000557331 INHAP05111 366 aa12.71□□□□□ -0.37
RDH11-210ENST00000557331 BMP8BP34820 402 aa12.71□□□□□ -0.37
RDH11-210ENST00000557331 IL15P40933 162 aaPredicted RBP12.71□□□□□ -0.37
RDH11-210ENST00000557331 NFIAQ12857 509 aa12.71□□□□□ -0.37
RDH11-210ENST00000557331 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
RDH11-210ENST00000557331 ATP2B3Q16720 1220 aa12.71□□□□□ -0.37
RDH11-210ENST00000557331 FAM110CQ1W6H9 321 aa12.71□□□□□ -0.37
RDH11-210ENST00000557331 ZSCAN29Q8IWY8 852 aaPredicted RBP12.71□□□□□ -0.37
RDH11-210ENST00000557331 PROCA1Q8NCQ7 364 aaPredicted RBP12.71□□□□□ -0.37
RDH11-210ENST00000557331 CRISPLD2Q9H0B8 497 aa12.71□□□□□ -0.37
RDH11-210ENST00000557331 UNC93B1Q9H1C4 597 aa12.71□□□□□ -0.37
RDH11-210ENST00000557331 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
RDH11-210ENST00000557331 GAKO14976 1311 aa12.7□□□□□ -0.38
RDH11-210ENST00000557331 PRDX5P30044 214 aa12.7□□□□□ -0.38
RDH11-210ENST00000557331 RGS3P49796 1198 aa12.7□□□□□ -0.38
RDH11-210ENST00000557331 GADL1Q6ZQY3 521 aa12.7□□□□□ -0.38
RDH11-210ENST00000557331 MRPL50Q8N5N7 158 aaKnown RBP12.7□□□□□ -0.38
RDH11-210ENST00000557331 DEFB118Q96PH6 123 aa12.7□□□□□ -0.38
RDH11-210ENST00000557331 AGTPBP1Q9UPW5 1226 aa12.7□□□□□ -0.38
RDH11-210ENST00000557331 DLL1O00548 723 aa12.69□□□□□ -0.38
RDH11-210ENST00000557331 RFX5P48382 616 aaPredicted RBP12.69□□□□□ -0.38
RDH11-210ENST00000557331 ALDH1L2Q3SY69 923 aa12.69□□□□□ -0.38
RDH11-210ENST00000557331 DZIP1Q86YF9 867 aaKnown RBP12.69□□□□□ -0.38
RDH11-210ENST00000557331 KLHDC4Q8TBB5 520 aa12.69□□□□□ -0.38
RDH11-210ENST00000557331 GABRQQ9UN88 632 aa12.69□□□□□ -0.38
RDH11-210ENST00000557331 MYH13Q9UKX3 1938 aa12.68□□□□□ -0.38
RDH11-210ENST00000557331 MGAMO43451 1857 aa12.68□□□□□ -0.38
RDH11-210ENST00000557331 E9PSI1 815 aa12.68□□□□□ -0.38
RDH11-210ENST00000557331 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
RDH11-210ENST00000557331 HMGCRP04035 888 aa12.68□□□□□ -0.38
RDH11-210ENST00000557331 LDHCP07864 332 aa12.68□□□□□ -0.38
RDH11-210ENST00000557331 UBTFL1P0CB47 393 aaPredicted RBP12.68□□□□□ -0.38
RDH11-210ENST00000557331 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
RDH11-210ENST00000557331 GSTO1P78417 241 aa12.68□□□□□ -0.38
RDH11-210ENST00000557331 ATG9AQ7Z3C6 839 aa12.68□□□□□ -0.38
RDH11-210ENST00000557331 TRMT44Q8IYL2 757 aaKnown RBP12.68□□□□□ -0.38
RDH11-210ENST00000557331 OSBPL5Q9H0X9 879 aaPredicted RBP12.68□□□□□ -0.38
RDH11-210ENST00000557331 AKAP2Q9Y2D5 859 aa12.68□□□□□ -0.38
RDH11-210ENST00000557331 ATRNL1Q5VV63 1379 aa12.68□□□□□ -0.38
RDH11-210ENST00000557331 RPTORQ8N122 1335 aa12.67□□□□□ -0.38
RDH11-210ENST00000557331 NBPF3Q9H094 633 aa12.67□□□□□ -0.38
RDH11-210ENST00000557331 HMX1Q9NP08 348 aaPredicted RBP12.67□□□□□ -0.38
RDH11-210ENST00000557331 ZSWIM8A7E2V4 1837 aa12.67□□□□□ -0.38
RDH11-210ENST00000557331 TRIM75PA6NK02 468 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 IGSF3O75054 1194 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 CT47B1P0C2W7 299 aaPredicted RBP12.66□□□□□ -0.38
RDH11-210ENST00000557331 ELNP15502 786 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 MVPQ14764 893 aaKnown RBP12.66□□□□□ -0.38
RDH11-210ENST00000557331 CCDC102BQ68D86 513 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 ERICH6Q7L0X2 663 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 ZFPM1Q8IX07 1006 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 ANKRD13CQ8N6S4 541 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 ZNF280CQ8ND82 737 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 PAWRQ96IZ0 340 aaKnown RBP12.66□□□□□ -0.38
RDH11-210ENST00000557331 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.66□□□□□ -0.38
RDH11-210ENST00000557331 AS3MTQ9HBK9 375 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 COPRSQ9NQ92 184 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 GINM1Q9NU53 330 aa12.66□□□□□ -0.38
RDH11-210ENST00000557331 GPR75-ASB3A0A0A6YYF3 556 aa12.65□□□□□ -0.38
RDH11-210ENST00000557331 XRCC5P13010 732 aaKnown RBP12.65□□□□□ -0.38
RDH11-210ENST00000557331 LRIT3Q3SXY7 679 aa12.65□□□□□ -0.38
RDH11-210ENST00000557331 GTF3C2Q8WUA4 911 aaPredicted RBP12.65□□□□□ -0.38
RDH11-210ENST00000557331 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
RDH11-210ENST00000557331 GDF15Q99988 308 aa12.65□□□□□ -0.38
RDH11-210ENST00000557331 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.65□□□□□ -0.38
RDH11-210ENST00000557331 ABCF2Q9UG63 623 aa12.65□□□□□ -0.38
RDH11-210ENST00000557331 STAP2Q9UGK3 403 aa12.65□□□□□ -0.38
RDH11-210ENST00000557331 HERC5Q9UII4 1024 aaKnown RBP12.65□□□□□ -0.38
RDH11-210ENST00000557331 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
RDH11-210ENST00000557331 DOCK3Q8IZD9 2030 aa12.65□□□□□ -0.38
RDH11-210ENST00000557331 MROH7-TTC4A0A0A0MT08 1334 aa12.64□□□□□ -0.39
RDH11-210ENST00000557331 ZNF521Q96K83 1311 aa12.64□□□□□ -0.39
RDH11-210ENST00000557331 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 204.9 ms