RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 KRT15P19012 456 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 BBOF1Q8ND07 529 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 TRIM15Q9C019 465 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 EHBP1L1Q8N3D4 1523 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 RGS16O15492 202 aaPredicted RBP9.79□□□□□ -0.84
SYNE3-205ENST00000557275 KMT5BQ4FZB7 885 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 ZNF569Q5MCW4 686 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 ORC3Q9UBD5 711 aaPredicted RBP9.79□□□□□ -0.84
SYNE3-205ENST00000557275 NCAPD3P42695 1498 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 RSBN1LQ6PCB5 846 aaPredicted RBP9.79□□□□□ -0.84
SYNE3-205ENST00000557275 PLCD1P51178 756 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 GOLGA5Q8TBA6 731 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 CEP19Q96LK0 163 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 A0A1B0GVL5 298 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 TTI1O43156 1089 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 WTAPQ15007 396 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 KRT79Q5XKE5 535 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 UTP14CQ5TAP6 766 aaKnown RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 JADE1Q6IE81 842 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 PDZD4Q76G19 769 aaPredicted RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 MORC4Q8TE76 937 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 RPGRQ92834 1020 aaKnown RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 SERPINI1Q99574 410 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 TEX13AQ9BXU3 409 aaPredicted RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 FGFR1OP2Q9NVK5 253 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 SMIM23A6NLE4 172 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 EEF1DP29692 281 aaKnown RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 KIF2CQ99661 725 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 IFNA8P32881 189 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 SERPINB2P05120 415 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 P4HA1P13674 534 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 GABPAQ06546 454 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 IFIT1BQ5T764 474 aaKnown RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 HAUS3Q68CZ6 603 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 KIF1CO43896 1103 aaKnown RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 KPNA2P52292 529 aaKnown RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 SLC9C1Q4G0N8 1177 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 TMEM232C9JQI7 657 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 DAPK3O43293 454 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 KRT4P19013 534 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 MRPL40Q9NQ50 206 aaKnown RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 FAM135AQ9P2D6 1515 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 ANKRD50Q9ULJ7 1429 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 THAP12O43422 761 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 MCM7P33993 719 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 GRIN1Q05586 938 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 C1orf115Q9H7X2 142 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 RNF216Q9NWF9 866 aaPredicted RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 RHOXF2BP0C7M4 288 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 RHOXF2Q9BQY4 288 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 BAIAP2L1Q9UHR4 511 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 TDRD9Q8NDG6 1382 aaKnown RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 SERPINB10P48595 397 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 DIXDC1Q155Q3 683 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 INTS4Q96HW7 963 aaKnown RBP9.78□□□□□ -0.84
SYNE3-205ENST00000557275 IWS1Q96ST2 819 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 RABEP2Q9H5N1 569 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 RTEL1Q9NZ71 1219 aa9.78□□□□□ -0.84
SYNE3-205ENST00000557275 PTGS1P23219 599 aa9.77□□□□□ -0.84
SYNE3-205ENST00000557275 TMTC1Q8IUR5 882 aa9.77□□□□□ -0.84
SYNE3-205ENST00000557275 KCNH5Q8NCM2 988 aa9.77□□□□□ -0.84
SYNE3-205ENST00000557275 USP16Q9Y5T5 823 aa9.77□□□□□ -0.84
SYNE3-205ENST00000557275 HYOU1Q9Y4L1 999 aa9.77□□□□□ -0.84
SYNE3-205ENST00000557275 CALUO43852 315 aaPredicted RBP9.77□□□□□ -0.85
SYNE3-205ENST00000557275 SUN1O94901 812 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 PPP2R1AP30153 589 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 LONP1P36776 959 aaKnown RBP9.77□□□□□ -0.85
SYNE3-205ENST00000557275 TTC25Q96NG3 672 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 YY1AP1Q9H869 796 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 PALMDQ9NP74 551 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 NSD2O96028 1365 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 BRDTQ58F21 947 aaPredicted RBP9.77□□□□□ -0.85
SYNE3-205ENST00000557275 MICU3Q86XE3 530 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 NUB1Q9Y5A7 615 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 CCDC78A2IDD5 438 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 SERPINB6P35237 376 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 TRIM58Q8NG06 486 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 DTNBP1Q96EV8 351 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 ZBTB43O43298 467 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 GRAMD4Q6IC98 578 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 THEMISQ8N1K5 641 aaPredicted RBP9.77□□□□□ -0.85
SYNE3-205ENST00000557275 NUCB1Q02818 461 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 TRIM56Q9BRZ2 755 aaKnown RBP9.77□□□□□ -0.85
SYNE3-205ENST00000557275 ASIC3Q9UHC3 531 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 DYNC1I2Q13409 638 aaKnown RBP9.77□□□□□ -0.85
SYNE3-205ENST00000557275 NME8Q8N427 588 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 PHKBQ93100 1093 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 RIC8AQ9NPQ8 531 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 CCDC169A6NNP5 214 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 SART1O43290 800 aaKnown RBP9.77□□□□□ -0.85
SYNE3-205ENST00000557275 RTN1Q16799 776 aa9.77□□□□□ -0.85
SYNE3-205ENST00000557275 CFAP70Q5T0N1 1121 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 LRPPRCP42704 1394 aaKnown RBP9.76□□□□□ -0.85
SYNE3-205ENST00000557275 TYRO3Q06418 890 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 LRRC8BQ6P9F7 803 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 UIMC1Q96RL1 719 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 ECHDC1Q9NTX5 307 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 ANGPTL2Q9UKU9 493 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 UQCRFS1P1P0C7P4 283 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms