RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 FKTNO75072 461 aa11□□□□□ -0.65
VRK1-206ENST00000557222 VAMP4O75379 141 aa11□□□□□ -0.65
VRK1-206ENST00000557222 SASH1O94885 1247 aa11□□□□□ -0.65
VRK1-206ENST00000557222 TBC1D8O95759 1140 aa11□□□□□ -0.65
VRK1-206ENST00000557222 ZBTB48P10074 688 aaPredicted RBP11□□□□□ -0.65
VRK1-206ENST00000557222 CD46P15529 392 aa11□□□□□ -0.65
VRK1-206ENST00000557222 SUPT20HL1Q3ZLR7 823 aa11□□□□□ -0.65
VRK1-206ENST00000557222 MORN1Q5T089 497 aa11□□□□□ -0.65
VRK1-206ENST00000557222 FBXO46Q6PJ61 603 aaPredicted RBP11□□□□□ -0.65
VRK1-206ENST00000557222 ZNF804AQ7Z570 1209 aa11□□□□□ -0.65
VRK1-206ENST00000557222 KIAA0825Q8IV33 1275 aa11□□□□□ -0.65
VRK1-206ENST00000557222 DEFB129Q9H1M3 183 aa11□□□□□ -0.65
VRK1-206ENST00000557222 RNF223E7ERA6 249 aa10.99□□□□□ -0.65
VRK1-206ENST00000557222 ADH1BP00325 375 aa10.99□□□□□ -0.65
VRK1-206ENST00000557222 KLRK1P26718 216 aa10.99□□□□□ -0.65
VRK1-206ENST00000557222 SOX10P56693 466 aa10.99□□□□□ -0.65
VRK1-206ENST00000557222 FOXO4P98177 505 aa10.99□□□□□ -0.65
VRK1-206ENST00000557222 BEND3Q5T5X7 828 aa10.99□□□□□ -0.65
VRK1-206ENST00000557222 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
VRK1-206ENST00000557222 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
VRK1-206ENST00000557222 ANGEL1Q9UNK9 670 aaKnown RBP10.99□□□□□ -0.65
VRK1-206ENST00000557222 SCAF8Q9UPN6 1271 aaKnown RBP10.99□□□□□ -0.65
VRK1-206ENST00000557222 SPEF2Q9C093 1822 aa10.98□□□□□ -0.65
VRK1-206ENST00000557222 S1PR4O95977 384 aa10.98□□□□□ -0.65
VRK1-206ENST00000557222 PRPF38BQ5VTL8 546 aaKnown RBP10.98□□□□□ -0.65
VRK1-206ENST00000557222 CERS5Q8N5B7 392 aa10.98□□□□□ -0.65
VRK1-206ENST00000557222 V9GY48 417 aaPredicted RBP10.98□□□□□ -0.65
VRK1-206ENST00000557222 FANCIQ9NVI1 1328 aa10.98□□□□□ -0.65
VRK1-206ENST00000557222 ALDH1L1O75891 902 aa10.97□□□□□ -0.65
VRK1-206ENST00000557222 UBE4AQ14139 1066 aa10.97□□□□□ -0.65
VRK1-206ENST00000557222 CCDC57Q2TAC2 916 aa10.97□□□□□ -0.65
VRK1-206ENST00000557222 CFAP100Q494V2 611 aa10.97□□□□□ -0.65
VRK1-206ENST00000557222 OTUD7BQ6GQQ9 843 aa10.97□□□□□ -0.65
VRK1-206ENST00000557222 GPCPD1Q9NPB8 672 aa10.97□□□□□ -0.65
VRK1-206ENST00000557222 FAM205AQ6ZU69 1335 aa10.97□□□□□ -0.65
VRK1-206ENST00000557222 HTTP42858 3142 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 GRM8O00222 908 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 TAF5LO75529 589 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 CLCN1P35523 988 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 IREB2P48200 963 aaKnown RBP10.96□□□□□ -0.65
VRK1-206ENST00000557222 TNFAIP1Q13829 316 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 CCDC184Q52MB2 194 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 INTS3Q68E01 1043 aaKnown RBP10.96□□□□□ -0.65
VRK1-206ENST00000557222 LMBR1LQ6UX01 489 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 LDHAL6AQ6ZMR3 332 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 SPSB2Q99619 263 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 SERPINA10Q9UK55 444 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
VRK1-206ENST00000557222 EXOSC9Q06265 439 aaKnown RBP10.95□□□□□ -0.66
VRK1-206ENST00000557222 PRKG1Q13976 671 aa10.95□□□□□ -0.66
VRK1-206ENST00000557222 TAF7LQ5H9L4 462 aa10.95□□□□□ -0.66
VRK1-206ENST00000557222 ANKRD13AQ8IZ07 590 aa10.95□□□□□ -0.66
VRK1-206ENST00000557222 HELBQ8NG08 1087 aaPredicted RBP10.95□□□□□ -0.66
VRK1-206ENST00000557222 TDRD7Q8NHU6 1098 aaKnown RBP10.95□□□□□ -0.66
VRK1-206ENST00000557222 WNK4Q96J92 1243 aa10.95□□□□□ -0.66
VRK1-206ENST00000557222 PRMT6Q96LA8 375 aaPredicted RBP10.95□□□□□ -0.66
VRK1-206ENST00000557222 SLC6A16Q9GZN6 736 aa10.95□□□□□ -0.66
VRK1-206ENST00000557222 CNNM1Q9NRU3 951 aa10.95□□□□□ -0.66
VRK1-206ENST00000557222 CHMP3Q9Y3E7 222 aa10.95□□□□□ -0.66
VRK1-206ENST00000557222 ECM29Q5VYK3 1845 aa10.95□□□□□ -0.66
VRK1-206ENST00000557222 SNAP23O00161 211 aa10.94□□□□□ -0.66
VRK1-206ENST00000557222 USP2O75604 605 aaPredicted RBP10.94□□□□□ -0.66
VRK1-206ENST00000557222 HIBADHP31937 336 aaKnown RBP10.94□□□□□ -0.66
VRK1-206ENST00000557222 THAP11Q96EK4 314 aa10.94□□□□□ -0.66
VRK1-206ENST00000557222 ERO1AQ96HE7 468 aa10.94□□□□□ -0.66
VRK1-206ENST00000557222 R3HDMLQ9H3Y0 253 aa10.94□□□□□ -0.66
VRK1-206ENST00000557222 FAM217BQ9NTX9 383 aaPredicted RBP10.94□□□□□ -0.66
VRK1-206ENST00000557222 C9orf78Q9NZ63 289 aaPredicted RBP10.94□□□□□ -0.66
VRK1-206ENST00000557222 KIAA0100Q14667 2235 aaKnown RBP10.93□□□□□ -0.66
VRK1-206ENST00000557222 LAMB1P07942 1786 aa10.93□□□□□ -0.66
VRK1-206ENST00000557222 F6X3S4 739 aa10.93□□□□□ -0.66
VRK1-206ENST00000557222 HDLBPQ00341 1268 aaKnown RBP10.93□□□□□ -0.66
VRK1-206ENST00000557222 RASA3Q14644 834 aa10.93□□□□□ -0.66
VRK1-206ENST00000557222 EPHA10Q5JZY3 1008 aa10.93□□□□□ -0.66
VRK1-206ENST00000557222 NBPF12Q5TAG4 269 aaPredicted RBP10.93□□□□□ -0.66
VRK1-206ENST00000557222 ANKLE1Q8NAG6 615 aa10.93□□□□□ -0.66
VRK1-206ENST00000557222 REPIN1Q9BWE0 567 aaKnown RBP10.93□□□□□ -0.66
VRK1-206ENST00000557222 MRIQ9BWK5 157 aa10.93□□□□□ -0.66
VRK1-206ENST00000557222 SRCIN1Q9C0H9 1055 aa10.93□□□□□ -0.66
VRK1-206ENST00000557222 VEZTQ9HBM0 779 aa10.93□□□□□ -0.66
VRK1-206ENST00000557222 MRS2Q9HD23 443 aa10.93□□□□□ -0.66
VRK1-206ENST00000557222 SSC5DA1L4H1 1573 aa10.93□□□□□ -0.66
VRK1-206ENST00000557222 UTYO14607 1347 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 MROH5Q6ZUA9 1318 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 CLRN2A0PK11 232 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 F8W031 263 aaPredicted RBP10.92□□□□□ -0.66
VRK1-206ENST00000557222 IGF2BP3O00425 579 aaKnown RBP eCLIP10.92□□□□□ -0.66
VRK1-206ENST00000557222 KDM4AO75164 1064 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 TNNI2P48788 182 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 RBM5P52756 815 aaKnown RBP eCLIP10.92□□□□□ -0.66
VRK1-206ENST00000557222 ARHGEF6Q15052 776 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 MFSD14BQ5SR56 506 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 OTOP1Q7RTM1 612 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 TBC1D22AQ8WUA7 517 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 GCC1Q96CN9 775 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 CLMNQ96JQ2 1002 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 FAM84BQ96KN1 310 aaPredicted RBP10.92□□□□□ -0.66
VRK1-206ENST00000557222 ZNF70Q9UC06 446 aaPredicted RBP10.92□□□□□ -0.66
VRK1-206ENST00000557222 RIPOR2Q9Y4F9 1068 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 PCDHAC2Q9Y5I4 1007 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms