RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ADH1AP07327 375 aa6.67□□□□□ -1.34
ATXN3-244ENST00000556898 PTGIRP43119 386 aa6.67□□□□□ -1.34
ATXN3-244ENST00000556898 CTCFP49711 727 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-244ENST00000556898 USPL1Q5W0Q7 1092 aa6.67□□□□□ -1.34
ATXN3-244ENST00000556898 TTLL6Q8N841 843 aa6.67□□□□□ -1.34
ATXN3-244ENST00000556898 PNMA1Q8ND90 353 aa6.67□□□□□ -1.34
ATXN3-244ENST00000556898 ISCA1Q9BUE6 129 aa6.67□□□□□ -1.34
ATXN3-244ENST00000556898 CHMP4AQ9BY43 222 aa6.67□□□□□ -1.34
ATXN3-244ENST00000556898 SRCIN1Q9C0H9 1055 aa6.67□□□□□ -1.34
ATXN3-244ENST00000556898 MKRN1Q9UHC7 482 aaKnown RBP6.67□□□□□ -1.34
ATXN3-244ENST00000556898 ARFGEF2Q9Y6D5 1785 aa6.67□□□□□ -1.34
ATXN3-244ENST00000556898 NEURL1BA8MQ27 555 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 ESPNB1AK53 854 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 POLRMTO00411 1230 aaKnown RBP6.66□□□□□ -1.34
ATXN3-244ENST00000556898 FOXN1O15353 648 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 NBPF7P0C2Y1 421 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-244ENST00000556898 CCT4P50991 539 aaKnown RBP6.66□□□□□ -1.34
ATXN3-244ENST00000556898 TCIRG1Q13488 830 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 BICDL1Q6ZP65 573 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 SYNE4Q8N205 404 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 AIDAQ96BJ3 306 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 USP44Q9H0E7 712 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 NARFQ9UHQ1 456 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 DDX19BQ9UMR2 479 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 UBN2Q6ZU65 1347 aa6.66□□□□□ -1.34
ATXN3-244ENST00000556898 USP42Q9H9J4 1324 aaKnown RBP6.66□□□□□ -1.34
ATXN3-244ENST00000556898 WDR90Q96KV7 1748 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 A0A087WZG4 1122 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 H0YIN7 160 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 RNF225M0QZC1 329 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-244ENST00000556898 IGHDP01880 384 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 RHOQP17081 205 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 GCKRQ14397 625 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 EPHA10Q5JZY3 1008 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 SUSD4Q5VX71 490 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 TBC1D9BQ66K14 1250 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 GPAT2Q6NUI2 795 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 NLRP10Q86W26 655 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 ZNF34Q8IZ26 560 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 LINS1Q8NG48 757 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 KAZALD1Q96I82 304 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 SUCLG2Q96I99 432 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 ZBTB40Q9NUA8 1239 aa6.65□□□□□ -1.34
ATXN3-244ENST00000556898 LRRFIP2Q9Y608 721 aaKnown RBP6.65□□□□□ -1.34
ATXN3-244ENST00000556898 ERVV-1B6SEH8 477 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 ALDH1L1O75891 902 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 SERPINB2P05120 415 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 CELA2BP08218 269 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-244ENST00000556898 CASP7P55210 303 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 NEXNQ0ZGT2 675 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 PRICKLE2Q7Z3G6 844 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 NPM2Q86SE8 214 aaKnown RBP6.64□□□□□ -1.35
ATXN3-244ENST00000556898 SKAP1Q86WV1 359 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 C2CD5Q86YS7 1000 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 SIRT2Q8IXJ6 389 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 PRM3Q9NNZ6 103 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 CWC25Q9NXE8 425 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-244ENST00000556898 PPP4R2Q9NY27 417 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 NIP7Q9Y221 180 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATXN3-244ENST00000556898 C4AP0C0L4 1744 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 UBR3Q6ZT12 1888 aa6.64□□□□□ -1.35
ATXN3-244ENST00000556898 H7C1W4 665 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 NFKBIEO00221 500 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 GRM8O00222 908 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 LBX1P52954 281 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 MARSP56192 900 aaKnown RBP6.63□□□□□ -1.35
ATXN3-244ENST00000556898 SCN7AQ01118 1682 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 SRSF11Q05519 484 aaKnown RBP6.63□□□□□ -1.35
ATXN3-244ENST00000556898 IRF5Q13568 498 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 NFIXQ14938 502 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 NBPF20Q3BBV1 942 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 BCORQ6W2J9 1755 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 LYSMD3Q7Z3D4 306 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 UBE3BQ7Z3V4 1068 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 ANKRD44Q8N8A2 993 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 FAM89AQ96GI7 184 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 POM121Q96HA1 1249 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 ABHD8Q96I13 439 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 CCDC85AQ96PX6 553 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-244ENST00000556898 GDPD2Q9HCC8 539 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 CYLDQ9NQC7 956 aa6.63□□□□□ -1.35
ATXN3-244ENST00000556898 C9orf78Q9NZ63 289 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-244ENST00000556898 DNMT3AQ9Y6K1 912 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-244ENST00000556898 N4BP2Q86UW6 1770 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-244ENST00000556898 CNTNAP1P78357 1384 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 UTYO14607 1347 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 PNMA6EA0A0J9YXQ4 647 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 IQCA1LA6NCM1 817 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 A6NJR5 290 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 TMEM88BA6NKF7 163 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 NTSR2O95665 410 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 GNAI2P04899 355 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 UBTFL1P0CB47 393 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-244ENST00000556898 HCLS1P14317 486 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-244ENST00000556898 MLLT1Q03111 559 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-244ENST00000556898 HSP90AB3PQ58FF7 597 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 CEP85Q6P2H3 762 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 LDHDQ86WU2 507 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 CCDC191Q8NCU4 936 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 CCDC136Q96JN2 1154 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms