RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 MAP3K9P80192 1104 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 MLLT1Q03111 559 aaPredicted RBP8.9□□□□□ -0.98
PCNX1-213ENST00000556846 GORABQ5T7V8 394 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 HHIPL2Q6UWX4 724 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 ATF7IPQ6VMQ6 1270 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 HOOK2Q96ED9 719 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 ZDHHC15Q96MV8 337 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 NEUROD6Q96NK8 337 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 COPRSQ9NQ92 184 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 DENND2AQ9ULE3 1009 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 AKAP2Q9Y2D5 859 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 CSADQ9Y600 493 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 SEMA3EO15041 775 aa8.89□□□□□ -0.99
PCNX1-213ENST00000556846 GNAI2P04899 355 aa8.89□□□□□ -0.99
PCNX1-213ENST00000556846 TRIM27P14373 513 aa8.89□□□□□ -0.99
PCNX1-213ENST00000556846 TIMM10P62072 90 aa8.89□□□□□ -0.99
PCNX1-213ENST00000556846 G3BP1Q13283 466 aaKnown RBP eCLIP8.89□□□□□ -0.99
PCNX1-213ENST00000556846 PKN2Q16513 984 aaKnown RBP8.89□□□□□ -0.99
PCNX1-213ENST00000556846 ZKSCAN2Q63HK3 967 aa8.89□□□□□ -0.99
PCNX1-213ENST00000556846 APOBEC3HQ6NTF7 200 aaKnown RBP8.89□□□□□ -0.99
PCNX1-213ENST00000556846 OPTNQ96CV9 577 aa8.89□□□□□ -0.99
PCNX1-213ENST00000556846 TEPSINQ96N21 525 aa8.89□□□□□ -0.99
PCNX1-213ENST00000556846 WDHD1O75717 1129 aaPredicted RBP8.88□□□□□ -0.99
PCNX1-213ENST00000556846 ADORA1P30542 326 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 PHKA1P46020 1223 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 TCP10Q12799 353 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 TFCP2Q12800 502 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 DIXDC1Q155Q3 683 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 DCAF15Q66K64 600 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 CCDC102BQ68D86 513 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.88□□□□□ -0.99
PCNX1-213ENST00000556846 MIGA2Q7L4E1 593 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 FAM83AQ86UY5 434 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 ZGPATQ8N5A5 531 aaKnown RBP8.88□□□□□ -0.99
PCNX1-213ENST00000556846 KCTD12Q96CX2 325 aaKnown RBP8.88□□□□□ -0.99
PCNX1-213ENST00000556846 R3HDMLQ9H3Y0 253 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 USP40Q9NVE5 1235 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 ABCF2Q9UG63 623 aa8.88□□□□□ -0.99
PCNX1-213ENST00000556846 SSC5DA1L4H1 1573 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 CCL15-CCL14A0A0B4J2E2 113 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 A0A1B0GUL7 405 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 IGF2BP3O00425 579 aaKnown RBP eCLIP8.87□□□□□ -0.99
PCNX1-213ENST00000556846 PRDX5P30044 214 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 GTF2A2P52657 109 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 SOX10P56693 466 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 OS9Q13438 667 aaPredicted RBP8.87□□□□□ -0.99
PCNX1-213ENST00000556846 VGLL4Q14135 290 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 MVPQ14764 893 aaKnown RBP8.87□□□□□ -0.99
PCNX1-213ENST00000556846 CCL15Q16663 113 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 NOM1Q5C9Z4 860 aaKnown RBP8.87□□□□□ -0.99
PCNX1-213ENST00000556846 FKBP1CQ5VVH2 108 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 SPTY2D1Q68D10 685 aaPredicted RBP8.87□□□□□ -0.99
PCNX1-213ENST00000556846 CDC42EP5Q6NZY7 148 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 DZIP1Q86YF9 867 aaKnown RBP8.87□□□□□ -0.99
PCNX1-213ENST00000556846 SLF2Q8IX21 1173 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 FTSJ3Q8IY81 847 aaKnown RBP8.87□□□□□ -0.99
PCNX1-213ENST00000556846 FAM151AQ8WW52 585 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 XAGE2Q96GT9 111 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 WRNIP1Q96S55 665 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 HPS5Q9UPZ3 1129 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 TNNQ9UQP3 1299 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 DAGLAQ9Y4D2 1042 aa8.87□□□□□ -0.99
PCNX1-213ENST00000556846 GJA5P36382 358 aa8.86□□□□□ -0.99
PCNX1-213ENST00000556846 RGS19P49795 217 aa8.86□□□□□ -0.99
PCNX1-213ENST00000556846 CRHR2Q13324 411 aa8.86□□□□□ -0.99
PCNX1-213ENST00000556846 MTX1Q13505 466 aa8.86□□□□□ -0.99
PCNX1-213ENST00000556846 Q6ZNB5 142 aa8.86□□□□□ -0.99
PCNX1-213ENST00000556846 ERO1BQ86YB8 467 aa8.86□□□□□ -0.99
PCNX1-213ENST00000556846 ZSCAN29Q8IWY8 852 aaPredicted RBP8.86□□□□□ -0.99
PCNX1-213ENST00000556846 TMEM57Q8N5G2 664 aa8.86□□□□□ -0.99
PCNX1-213ENST00000556846 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.86□□□□□ -0.99
PCNX1-213ENST00000556846 ZKSCAN4Q969J2 545 aaPredicted RBP8.86□□□□□ -0.99
PCNX1-213ENST00000556846 CFHR5Q9BXR6 569 aa8.86□□□□□ -0.99
PCNX1-213ENST00000556846 ZNF341Q9BYN7 854 aa8.86□□□□□ -0.99
PCNX1-213ENST00000556846 TRIM17Q9Y577 477 aa8.86□□□□□ -0.99
PCNX1-213ENST00000556846 SALL1Q9NSC2 1324 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 ZNF646O15015 1829 aaPredicted RBP8.85□□□□□ -0.99
PCNX1-213ENST00000556846 CASP8AP2Q9UKL3 1982 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 TESPA1A2RU30 521 aaPredicted RBP8.85□□□□□ -0.99
PCNX1-213ENST00000556846 CETPP11597 493 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 SP3Q02447 781 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 SNAPC2Q13487 334 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 RASGRF1Q13972 1273 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 TAF1CQ15572 869 aaPredicted RBP8.85□□□□□ -0.99
PCNX1-213ENST00000556846 FBXO46Q6PJ61 603 aaPredicted RBP8.85□□□□□ -0.99
PCNX1-213ENST00000556846 ERICH6Q7L0X2 663 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 ITPRIPQ8IWB1 547 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 ERO1AQ96HE7 468 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 PTPN18Q99952 460 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 ZFYVE28Q9HCC9 887 aa8.85□□□□□ -0.99
PCNX1-213ENST00000556846 PNMA6EA0A0J9YXQ4 647 aa8.84□□□□□ -0.99
PCNX1-213ENST00000556846 SPDYE5A6NIY4 337 aa8.84□□□□□ -0.99
PCNX1-213ENST00000556846 STK25O00506 426 aa8.84□□□□□ -0.99
PCNX1-213ENST00000556846 SURF6O75683 361 aaKnown RBP8.84□□□□□ -0.99
PCNX1-213ENST00000556846 LDHCP07864 332 aa8.84□□□□□ -0.99
PCNX1-213ENST00000556846 INPP5BP32019 993 aa8.84□□□□□ -0.99
PCNX1-213ENST00000556846 NFIAQ12857 509 aa8.84□□□□□ -0.99
PCNX1-213ENST00000556846 PICALMQ13492 652 aa8.84□□□□□ -0.99
PCNX1-213ENST00000556846 ARHGEF6Q15052 776 aa8.84□□□□□ -0.99
PCNX1-213ENST00000556846 SPATA5Q8NB90 893 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms