RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 EVI5LQ96CN4 794 aa21.12■□□□□ 0.97
SHMT2-225ENST00000556798 ENTPD3O75355 529 aa21.11■□□□□ 0.97
SHMT2-225ENST00000556798 MBD4O95243 580 aa21.11■□□□□ 0.97
SHMT2-225ENST00000556798 SUPT20HL1Q3ZLR7 823 aa21.11■□□□□ 0.97
SHMT2-225ENST00000556798 MAPKAPK5Q8IW41 473 aa21.11■□□□□ 0.97
SHMT2-225ENST00000556798 C2orf69Q8N8R5 385 aa21.11■□□□□ 0.97
SHMT2-225ENST00000556798 RILPL2Q969X0 211 aa21.11■□□□□ 0.97
SHMT2-225ENST00000556798 ARMT1Q9H993 441 aa21.11■□□□□ 0.97
SHMT2-225ENST00000556798 TLL2Q9Y6L7 1015 aa21.11■□□□□ 0.97
SHMT2-225ENST00000556798 FLT1P17948 1338 aa21.1■□□□□ 0.97
SHMT2-225ENST00000556798 TTC22Q5TAA0 569 aa21.1■□□□□ 0.97
SHMT2-225ENST00000556798 SH3BP5LQ7L8J4 393 aa21.1■□□□□ 0.97
SHMT2-225ENST00000556798 ZSCAN29Q8IWY8 852 aaPredicted RBP21.1■□□□□ 0.97
SHMT2-225ENST00000556798 PUS7LQ9H0K6 701 aaKnown RBP21.1■□□□□ 0.97
SHMT2-225ENST00000556798 OSBPL5Q9H0X9 879 aaPredicted RBP21.1■□□□□ 0.97
SHMT2-225ENST00000556798 ZFYP08048 801 aaPredicted RBP21.09■□□□□ 0.97
SHMT2-225ENST00000556798 GSPT1P15170 499 aaKnown RBP21.09■□□□□ 0.97
SHMT2-225ENST00000556798 HUNKP57058 714 aa21.09■□□□□ 0.97
SHMT2-225ENST00000556798 SAPCD2Q86UD0 394 aa21.09■□□□□ 0.97
SHMT2-225ENST00000556798 APPBP2Q92624 585 aa21.09■□□□□ 0.97
SHMT2-225ENST00000556798 ANGEL1Q9UNK9 670 aaKnown RBP21.09■□□□□ 0.97
SHMT2-225ENST00000556798 DDTLA6NHG4 134 aaPredicted RBP21.08■□□□□ 0.97
SHMT2-225ENST00000556798 UBE2Q2LH0YL09 131 aa21.08■□□□□ 0.97
SHMT2-225ENST00000556798 M0R2C6 588 aa21.08■□□□□ 0.97
SHMT2-225ENST00000556798 NPM3O75607 178 aaKnown RBP21.08■□□□□ 0.97
SHMT2-225ENST00000556798 USP5P45974 858 aa21.08■□□□□ 0.97
SHMT2-225ENST00000556798 CERS3Q8IU89 383 aa21.08■□□□□ 0.97
SHMT2-225ENST00000556798 OSBP2Q969R2 916 aa21.08■□□□□ 0.97
SHMT2-225ENST00000556798 AIDAQ96BJ3 306 aa21.08■□□□□ 0.97
SHMT2-225ENST00000556798 CSRNP1Q96S65 589 aa21.08■□□□□ 0.97
SHMT2-225ENST00000556798 MKRN1Q9UHC7 482 aaKnown RBP21.08■□□□□ 0.97
SHMT2-225ENST00000556798 COL2A1P02458 1487 aaPredicted RBP21.07■□□□□ 0.96
SHMT2-225ENST00000556798 ATAD5Q96QE3 1844 aa21.07■□□□□ 0.96
SHMT2-225ENST00000556798 SLURP2P0DP57 97 aa21.07■□□□□ 0.96
SHMT2-225ENST00000556798 FKBP1BP68106 108 aa21.07■□□□□ 0.96
SHMT2-225ENST00000556798 SLC4A8Q2Y0W8 1093 aa21.07■□□□□ 0.96
SHMT2-225ENST00000556798 LRRFIP1Q32MZ4 808 aaKnown RBP21.07■□□□□ 0.96
SHMT2-225ENST00000556798 PAXIP1Q6ZW49 1069 aaPredicted RBP21.07■□□□□ 0.96
SHMT2-225ENST00000556798 MIGA2Q7L4E1 593 aa21.07■□□□□ 0.96
SHMT2-225ENST00000556798 SDR42E1Q8WUS8 393 aa21.07■□□□□ 0.96
SHMT2-225ENST00000556798 SEC62Q99442 399 aaKnown RBP21.07■□□□□ 0.96
SHMT2-225ENST00000556798 CRNKL1Q9BZJ0 848 aaKnown RBP21.07■□□□□ 0.96
SHMT2-225ENST00000556798 SAP30BPQ9UHR5 308 aaKnown RBP21.07■□□□□ 0.96
SHMT2-225ENST00000556798 CEP350Q5VT06 3117 aa21.07■□□□□ 0.96
SHMT2-225ENST00000556798 ATRNL1Q5VV63 1379 aa21.07■□□□□ 0.96
SHMT2-225ENST00000556798 MYH8P13535 1937 aa21.06■□□□□ 0.96
SHMT2-225ENST00000556798 PRKAB2O43741 272 aa21.06■□□□□ 0.96
SHMT2-225ENST00000556798 PPP1R12BO60237 982 aaPredicted RBP21.06■□□□□ 0.96
SHMT2-225ENST00000556798 ARMC9Q7Z3E5 817 aa21.06■□□□□ 0.96
SHMT2-225ENST00000556798 LAMB1P07942 1786 aa21.05■□□□□ 0.96
SHMT2-225ENST00000556798 RASSF10A6NK89 507 aa21.05■□□□□ 0.96
SHMT2-225ENST00000556798 USP2O75604 605 aaPredicted RBP21.05■□□□□ 0.96
SHMT2-225ENST00000556798 ZMYM1Q5SVZ6 1142 aa21.05■□□□□ 0.96
SHMT2-225ENST00000556798 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.05■□□□□ 0.96
SHMT2-225ENST00000556798 GPAA1O43292 621 aa21.04■□□□□ 0.96
SHMT2-225ENST00000556798 GRM1Q13255 1194 aa21.04■□□□□ 0.96
SHMT2-225ENST00000556798 DEFB115Q30KQ5 88 aa21.04■□□□□ 0.96
SHMT2-225ENST00000556798 HOOK2Q96ED9 719 aa21.04■□□□□ 0.96
SHMT2-225ENST00000556798 PALD1Q9ULE6 856 aa21.04■□□□□ 0.96
SHMT2-225ENST00000556798 SLC4A4Q9Y6R1 1079 aa21.04■□□□□ 0.96
SHMT2-225ENST00000556798 DOCK1Q14185 1865 aa21.03■□□□□ 0.96
SHMT2-225ENST00000556798 FAM196BA6NMK8 535 aa21.03■□□□□ 0.96
SHMT2-225ENST00000556798 SDSP20132 328 aa21.03■□□□□ 0.96
SHMT2-225ENST00000556798 IREB2P48200 963 aaKnown RBP21.03■□□□□ 0.96
SHMT2-225ENST00000556798 DCAF15Q66K64 600 aa21.03■□□□□ 0.96
SHMT2-225ENST00000556798 CYP4F22Q6NT55 531 aa21.03■□□□□ 0.96
SHMT2-225ENST00000556798 CCDC129Q6ZRS4 1044 aa21.03■□□□□ 0.96
SHMT2-225ENST00000556798 FAM227BQ96M60 508 aa21.03■□□□□ 0.96
SHMT2-225ENST00000556798 STRBPQ96SI9 672 aaKnown RBP21.03■□□□□ 0.96
SHMT2-225ENST00000556798 A0A0D9SFI3 127 aa21.02■□□□□ 0.96
SHMT2-225ENST00000556798 NMIQ13287 307 aaPredicted RBP21.02■□□□□ 0.96
SHMT2-225ENST00000556798 MAP3K11Q16584 847 aa21.02■□□□□ 0.96
SHMT2-225ENST00000556798 RGMBQ6NW40 437 aa21.02■□□□□ 0.96
SHMT2-225ENST00000556798 CLMNQ96JQ2 1002 aa21.02■□□□□ 0.96
SHMT2-225ENST00000556798 ZNF341Q9BYN7 854 aa21.02■□□□□ 0.96
SHMT2-225ENST00000556798 DCP1AQ9NPI6 582 aaPredicted RBP21.02■□□□□ 0.96
SHMT2-225ENST00000556798 THSD7BQ9C0I4 1608 aa21.01■□□□□ 0.95
SHMT2-225ENST00000556798 LDLRAD1Q5T700 205 aa21.01■□□□□ 0.95
SHMT2-225ENST00000556798 DNAJC5GQ8N7S2 189 aa21.01■□□□□ 0.95
SHMT2-225ENST00000556798 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.01■□□□□ 0.95
SHMT2-225ENST00000556798 KLRG1Q96E93 195 aa21.01■□□□□ 0.95
SHMT2-225ENST00000556798 HHIPL1Q96JK4 782 aa21.01■□□□□ 0.95
SHMT2-225ENST00000556798 WRNIP1Q96S55 665 aa21.01■□□□□ 0.95
SHMT2-225ENST00000556798 DHX36Q9H2U1 1008 aaKnown RBP21.01■□□□□ 0.95
SHMT2-225ENST00000556798 VEGFBP49765 207 aa21■□□□□ 0.95
SHMT2-225ENST00000556798 ZNF157P51786 506 aaPredicted RBP21■□□□□ 0.95
SHMT2-225ENST00000556798 EVX2Q03828 476 aa21■□□□□ 0.95
SHMT2-225ENST00000556798 CAPNS2Q96L46 248 aa21■□□□□ 0.95
SHMT2-225ENST00000556798 MCM9Q9NXL9 1143 aa21■□□□□ 0.95
SHMT2-225ENST00000556798 HLA-DOAP06340 250 aa20.99■□□□□ 0.95
SHMT2-225ENST00000556798 CYP2D6P10635 497 aa20.99■□□□□ 0.95
SHMT2-225ENST00000556798 INPP5BP32019 993 aa20.99■□□□□ 0.95
SHMT2-225ENST00000556798 VGLL4Q14135 290 aa20.99■□□□□ 0.95
SHMT2-225ENST00000556798 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.99■□□□□ 0.95
SHMT2-225ENST00000556798 RASAL3Q86YV0 1011 aa20.99■□□□□ 0.95
SHMT2-225ENST00000556798 ANKRD13AQ8IZ07 590 aa20.99■□□□□ 0.95
SHMT2-225ENST00000556798 HELLSQ9NRZ9 838 aa20.99■□□□□ 0.95
SHMT2-225ENST00000556798 DIAPH3Q9NSV4 1193 aa20.99■□□□□ 0.95
SHMT2-225ENST00000556798 ATP8A2Q9NTI2 1148 aa20.99■□□□□ 0.95
SHMT2-225ENST00000556798 PI4KBQ9UBF8 816 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms