RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 IQCA1LA6NCM1 817 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 USP17L12C9JPN9 530 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 USP17L21D6R901 530 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 CYP21A2P08686 494 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 MCM2P49736 904 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 PICALMQ13492 652 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 AKNAD1Q5T1N1 836 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 RBM26Q5T8P6 1007 aaKnown RBP10.92□□□□□ -0.66
ACTN1-218ENST00000556343 CTR9Q6PD62 1173 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 BLOC1S2Q6QNY1 142 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 NCOA7Q8NI08 942 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 IL17RAQ96F46 866 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 PRMT6Q96LA8 375 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-218ENST00000556343 JAKMIP1Q96N16 626 aaKnown RBP10.92□□□□□ -0.66
ACTN1-218ENST00000556343 TDRD3Q9H7E2 651 aaKnown RBP10.92□□□□□ -0.66
ACTN1-218ENST00000556343 ZNF70Q9UC06 446 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-218ENST00000556343 ANAPC4Q9UJX5 808 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 CYP46A1Q9Y6A2 500 aa10.92□□□□□ -0.66
ACTN1-218ENST00000556343 GLTPD2A6NH11 291 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 E7EWF7 191 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 DDNO94850 711 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-218ENST00000556343 HAND2P61296 217 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 FGD1P98174 961 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 ANKRD1Q15327 319 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 KIF4BQ2VIQ3 1234 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 ZSCAN29Q8IWY8 852 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-218ENST00000556343 STAG1Q8WVM7 1258 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 MKNK2Q9HBH9 465 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 VEZTQ9HBM0 779 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 ADARB2Q9NS39 739 aaKnown RBP10.91□□□□□ -0.66
ACTN1-218ENST00000556343 TOMM22Q9NS69 142 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 HACL1Q9UJ83 578 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 MYH7P12883 1935 aa10.91□□□□□ -0.66
ACTN1-218ENST00000556343 MAST2Q6P0Q8 1798 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 FLT1P17948 1338 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 COL4A5P29400 1685 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 WNT10BO00744 389 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 WDHD1O75717 1129 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 CASTP20810 708 aaKnown RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 MCM5P33992 734 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 NEK4P51957 841 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 SART3Q15020 963 aaKnown RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 TBC1D10BQ4KMP7 808 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 CCDC178Q5BJE1 867 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 C12orf60Q5U649 245 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 DHX32Q7L7V1 743 aaKnown RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 FAM83AQ86UY5 434 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 FOXP4Q8IVH2 680 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 RASEFQ8IZ41 740 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 ZNF444Q8N0Y2 327 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 FAM151AQ8WW52 585 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 ESR2Q92731 530 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 HOOK2Q96ED9 719 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 ZBED3Q96IU2 234 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 OSBPL5Q9H0X9 879 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 ZSWIM6Q9HCJ5 1215 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 EPB41L4AQ9HCS5 686 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 PI4KBQ9UBF8 816 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 SWAP70Q9UH65 585 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 MKRN1Q9UHC7 482 aaKnown RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 SAP30BPQ9UHR5 308 aaKnown RBP10.9□□□□□ -0.66
ACTN1-218ENST00000556343 PALD1Q9ULE6 856 aa10.9□□□□□ -0.66
ACTN1-218ENST00000556343 GOLGB1Q14789 3259 aaKnown RBP10.9□□□□□ -0.67
ACTN1-218ENST00000556343 SCN9AQ15858 1988 aa10.89□□□□□ -0.67
ACTN1-218ENST00000556343 ERICH2A1L162 156 aa10.89□□□□□ -0.67
ACTN1-218ENST00000556343 FOXP2O15409 715 aa10.89□□□□□ -0.67
ACTN1-218ENST00000556343 USP50Q70EL3 339 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-218ENST00000556343 RUFY3Q7L099 469 aa10.89□□□□□ -0.67
ACTN1-218ENST00000556343 SAMD7Q7Z3H4 446 aa10.89□□□□□ -0.67
ACTN1-218ENST00000556343 APOBEC3FQ8IUX4 373 aaKnown RBP10.89□□□□□ -0.67
ACTN1-218ENST00000556343 HSCBQ8IWL3 235 aa10.89□□□□□ -0.67
ACTN1-218ENST00000556343 CRACR2BQ8N4Y2 399 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-218ENST00000556343 CHMP4CQ96CF2 233 aa10.89□□□□□ -0.67
ACTN1-218ENST00000556343 L3MBTL3Q96JM7 780 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-218ENST00000556343 PDRG1Q9NUG6 133 aa10.89□□□□□ -0.67
ACTN1-218ENST00000556343 WDR19Q8NEZ3 1342 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 MYH2Q9UKX2 1941 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 CLRN2A0PK11 232 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 TCP10L2B9ZVM9 353 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 ORC4O43929 436 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 RPS6KB1P23443 525 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 EPS15P42566 896 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 CTDSPL2Q05D32 466 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 TCP10Q12799 353 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 NBPF9Q3BBW0 867 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 RRP12Q5JTH9 1297 aaKnown RBP10.88□□□□□ -0.67
ACTN1-218ENST00000556343 PPP4R3BQ5MIZ7 849 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 SRCAPQ6ZRS2 3230 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 PNMA8AQ86V59 439 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-218ENST00000556343 SNX21Q969T3 373 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 DCPSQ96C86 337 aaKnown RBP10.88□□□□□ -0.67
ACTN1-218ENST00000556343 MTA3Q9BTC8 594 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 EHD4Q9H223 541 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 ALDH8A1Q9H2A2 487 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-218ENST00000556343 SERPINB13Q9UIV8 391 aa10.88□□□□□ -0.67
ACTN1-218ENST00000556343 MYO5AQ9Y4I1 1855 aaKnown RBP10.87□□□□□ -0.67
ACTN1-218ENST00000556343 RANBP6O60518 1105 aaKnown RBP10.87□□□□□ -0.67
ACTN1-218ENST00000556343 NFIAQ12857 509 aa10.87□□□□□ -0.67
ACTN1-218ENST00000556343 ADCK5Q3MIX3 580 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms