RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 ATXN7L1Q9ULK2 861 aaPredicted RBP7.92□□□□□ -1.14
HIF1A-208ENST00000556237 HRH3Q9Y5N1 445 aa7.92□□□□□ -1.14
HIF1A-208ENST00000556237 CACNA1FO60840 1977 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 LOC102724428A0A0B4J2F2 783 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 UBTFL1P0CB47 393 aaPredicted RBP7.91□□□□□ -1.14
HIF1A-208ENST00000556237 COL8A1P27658 744 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 SIK1P57059 783 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 EFHC2Q5JST6 749 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 TTLL7Q6ZT98 887 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 PTF1AQ7RTS3 328 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 NPM2Q86SE8 214 aaKnown RBP7.91□□□□□ -1.14
HIF1A-208ENST00000556237 ANKRD44Q8N8A2 993 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 LINS1Q8NG48 757 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 PLBD2Q8NHP8 589 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 XAGE2Q96GT9 111 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 MYD88Q99836 296 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 RUBCNLQ9H714 662 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 C9orf78Q9NZ63 289 aaPredicted RBP7.91□□□□□ -1.14
HIF1A-208ENST00000556237 HDAC5Q9UQL6 1122 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 ADCY9O60503 1353 aa7.91□□□□□ -1.14
HIF1A-208ENST00000556237 KCPQ6ZWJ8 1503 aa7.9□□□□□ -1.14
HIF1A-208ENST00000556237 BMP4P12644 408 aa7.9□□□□□ -1.14
HIF1A-208ENST00000556237 RXRBP28702 533 aa7.9□□□□□ -1.14
HIF1A-208ENST00000556237 ATP8B2P98198 1209 aa7.9□□□□□ -1.14
HIF1A-208ENST00000556237 CWF19L2Q2TBE0 894 aaKnown RBP7.9□□□□□ -1.14
HIF1A-208ENST00000556237 C4orf17Q53FE4 359 aa7.9□□□□□ -1.14
HIF1A-208ENST00000556237 SLCO4C1Q6ZQN7 724 aa7.9□□□□□ -1.14
HIF1A-208ENST00000556237 FAM196AQ6ZSG2 479 aa7.9□□□□□ -1.14
HIF1A-208ENST00000556237 TBC1D9Q6ZT07 1266 aa7.9□□□□□ -1.14
HIF1A-208ENST00000556237 KRT27Q7Z3Y8 459 aa7.9□□□□□ -1.14
HIF1A-208ENST00000556237 SIRT2Q8IXJ6 389 aa7.9□□□□□ -1.14
HIF1A-208ENST00000556237 FHDC1Q9C0D6 1143 aaPredicted RBP7.9□□□□□ -1.14
HIF1A-208ENST00000556237 ITGB4P16144 1822 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 TOGARAM1Q9Y4F4 1720 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 PALLDQ8WX93 1383 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 NEURL1BA8MQ27 555 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 PIK3R2O00459 728 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 HMMRO75330 724 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 IGKV5-2P06315 115 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 NBPF7P0C2Y1 421 aaPredicted RBP7.89□□□□□ -1.15
HIF1A-208ENST00000556237 AMPD1P23109 780 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 MSX1P28360 303 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 ITPK1Q13572 414 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 GRIN2CQ14957 1233 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 ANKRD45Q5TZF3 282 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 CEP85Q6P2H3 762 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 INTS5Q6P9B9 1019 aaKnown RBP7.89□□□□□ -1.15
HIF1A-208ENST00000556237 KIF6Q6ZMV9 814 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 SKAP1Q86WV1 359 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 PLPP7Q8NBV4 271 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 CALR3Q96L12 384 aaKnown RBP7.89□□□□□ -1.15
HIF1A-208ENST00000556237 LRRFIP2Q9Y608 721 aaKnown RBP7.89□□□□□ -1.15
HIF1A-208ENST00000556237 WNK3Q9BYP7 1800 aa7.89□□□□□ -1.15
HIF1A-208ENST00000556237 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.89□□□□□ -1.15
HIF1A-208ENST00000556237 GLI3P10071 1580 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 GRM8O00222 908 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 FGFR3P22607 806 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 IL6STP40189 918 aaPredicted RBP7.88□□□□□ -1.15
HIF1A-208ENST00000556237 CRKLP46109 303 aaKnown RBP7.88□□□□□ -1.15
HIF1A-208ENST00000556237 RGS3P49796 1198 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 KCNQ4P56696 695 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 TCIRG1Q13488 830 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 GCKRQ14397 625 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 SMC5Q8IY18 1101 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 JARID2Q92833 1246 aaPredicted RBP7.88□□□□□ -1.15
HIF1A-208ENST00000556237 GCC1Q96CN9 775 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 ABHD17AQ96GS6 310 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 DCTPP1Q9H773 170 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 CCDC87Q9NVE4 849 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 GGA1Q9UJY5 639 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 DOLKQ9UPQ8 538 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 ZBTB1Q9Y2K1 713 aa7.88□□□□□ -1.15
HIF1A-208ENST00000556237 C5P01031 1676 aa7.87□□□□□ -1.15
HIF1A-208ENST00000556237 A0A087WZG4 1122 aa7.87□□□□□ -1.15
HIF1A-208ENST00000556237 C2CD2LO14523 706 aa7.87□□□□□ -1.15
HIF1A-208ENST00000556237 GNB5O14775 395 aa7.87□□□□□ -1.15
HIF1A-208ENST00000556237 TRIM37O94972 964 aa7.87□□□□□ -1.15
HIF1A-208ENST00000556237 FURINP09958 794 aa7.87□□□□□ -1.15
HIF1A-208ENST00000556237 SKIP12755 728 aa7.87□□□□□ -1.15
HIF1A-208ENST00000556237 HOXB4P17483 251 aaPredicted RBP7.87□□□□□ -1.15
HIF1A-208ENST00000556237 LINC00114Q6XXX2 140 aa7.87□□□□□ -1.15
HIF1A-208ENST00000556237 RHBDD1Q8TEB9 315 aa7.87□□□□□ -1.15
HIF1A-208ENST00000556237 NDFIP2Q9NV92 336 aa7.87□□□□□ -1.15
HIF1A-208ENST00000556237 RGS17Q9UGC6 210 aaPredicted RBP7.87□□□□□ -1.15
HIF1A-208ENST00000556237 ATP10DQ9P241 1426 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 MAP3K15Q6ZN16 1313 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 PNMA6EA0A0J9YXQ4 647 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 ERVV-1B6SEH8 477 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 EIF5P55010 431 aaKnown RBP7.86□□□□□ -1.15
HIF1A-208ENST00000556237 NUCB1Q02818 461 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 HLFQ16534 295 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 MAP7D1Q3KQU3 841 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 HSP90AB3PQ58FF7 597 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 POTEAQ6S8J7 498 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 PPP1R42Q7Z4L9 355 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 DEPDC4Q8N2C3 294 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 CCDC191Q8NCU4 936 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 SUCLG2Q96I99 432 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 ISCA1Q9BUE6 129 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 BCL11AQ9H165 835 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms