RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PTH1RQ03431 593 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 SBK1Q52WX2 424 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 AMOTL1Q8IY63 956 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 BACH2Q9BYV9 841 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 OSBPL5Q9H0X9 879 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-221ENST00000555773 NAPBQ9H115 298 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 DDX4Q9NQI0 724 aaKnown RBP14.88□□□□□ -0.03
SHMT2-221ENST00000555773 MCM9Q9NXL9 1143 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 GGA3Q9NZ52 723 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 TAOK2Q9UL54 1235 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 PPP2R3BQ9Y5P8 575 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 WDR90Q96KV7 1748 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 ZMYM6O95789 1325 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 FLT1P17948 1338 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 FOXP2O15409 715 aa14.87□□□□□ -0.03
SHMT2-221ENST00000555773 YY1P25490 414 aa14.87□□□□□ -0.03
SHMT2-221ENST00000555773 PICALMQ13492 652 aa14.87□□□□□ -0.03
SHMT2-221ENST00000555773 RASA3Q14644 834 aa14.87□□□□□ -0.03
SHMT2-221ENST00000555773 TTC6Q86TZ1 520 aa14.87□□□□□ -0.03
SHMT2-221ENST00000555773 LDHDQ86WU2 507 aa14.87□□□□□ -0.03
SHMT2-221ENST00000555773 SULF1Q8IWU6 871 aa14.87□□□□□ -0.03
SHMT2-221ENST00000555773 USP26Q9BXU7 913 aa14.87□□□□□ -0.03
SHMT2-221ENST00000555773 DEFB129Q9H1M3 183 aa14.87□□□□□ -0.03
SHMT2-221ENST00000555773 ARPP21Q9UBL0 812 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-221ENST00000555773 CLEC11AQ9Y240 323 aa14.87□□□□□ -0.03
SHMT2-221ENST00000555773 ASTN2O75129 1339 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-221ENST00000555773 MYO5AQ9Y4I1 1855 aaKnown RBP14.86□□□□□ -0.03
SHMT2-221ENST00000555773 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
SHMT2-221ENST00000555773 MAST2Q6P0Q8 1798 aa14.86□□□□□ -0.03
SHMT2-221ENST00000555773 USP17L12C9JPN9 530 aa14.86□□□□□ -0.03
SHMT2-221ENST00000555773 USP17L21D6R901 530 aa14.86□□□□□ -0.03
SHMT2-221ENST00000555773 POLR3DP05423 398 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-221ENST00000555773 TCP10Q12799 353 aa14.86□□□□□ -0.03
SHMT2-221ENST00000555773 CTR9Q6PD62 1173 aa14.86□□□□□ -0.03
SHMT2-221ENST00000555773 CDC37L1Q7L3B6 337 aa14.86□□□□□ -0.03
SHMT2-221ENST00000555773 FOXP4Q8IVH2 680 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-221ENST00000555773 EPB41L4AQ9HCS5 686 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-221ENST00000555773 SCN4AP35499 1836 aa14.85□□□□□ -0.03
SHMT2-221ENST00000555773 SEC24BO95487 1268 aa14.85□□□□□ -0.03
SHMT2-221ENST00000555773 HLA-DOAP06340 250 aa14.85□□□□□ -0.03
SHMT2-221ENST00000555773 C12orf60Q5U649 245 aa14.85□□□□□ -0.03
SHMT2-221ENST00000555773 KRT26Q7Z3Y9 468 aa14.85□□□□□ -0.03
SHMT2-221ENST00000555773 ZSCAN29Q8IWY8 852 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-221ENST00000555773 ZFPM1Q8IX07 1006 aa14.85□□□□□ -0.03
SHMT2-221ENST00000555773 HOOK2Q96ED9 719 aa14.85□□□□□ -0.03
SHMT2-221ENST00000555773 UPF2Q9HAU5 1272 aaKnown RBP14.85□□□□□ -0.03
SHMT2-221ENST00000555773 PI4KBQ9UBF8 816 aa14.85□□□□□ -0.03
SHMT2-221ENST00000555773 PALD1Q9ULE6 856 aa14.85□□□□□ -0.03
SHMT2-221ENST00000555773 RBM8AQ9Y5S9 174 aaKnown RBP14.85□□□□□ -0.03
SHMT2-221ENST00000555773 CNTNAP1P78357 1384 aa14.85□□□□□ -0.03
SHMT2-221ENST00000555773 ZNF213O14771 459 aa14.84□□□□□ -0.03
SHMT2-221ENST00000555773 SLC3A2P08195 630 aaKnown RBP14.84□□□□□ -0.03
SHMT2-221ENST00000555773 NECTIN1Q15223 517 aa14.84□□□□□ -0.03
SHMT2-221ENST00000555773 IMMTQ16891 758 aaKnown RBP14.84□□□□□ -0.03
SHMT2-221ENST00000555773 SUPT20HL1Q3ZLR7 823 aa14.84□□□□□ -0.03
SHMT2-221ENST00000555773 RNF20Q5VTR2 975 aa14.84□□□□□ -0.03
SHMT2-221ENST00000555773 TMEM39BQ9GZU3 492 aa14.84□□□□□ -0.03
SHMT2-221ENST00000555773 SAP30BPQ9UHR5 308 aaKnown RBP14.84□□□□□ -0.03
SHMT2-221ENST00000555773 ANAPC4Q9UJX5 808 aa14.84□□□□□ -0.03
SHMT2-221ENST00000555773 MYH7P12883 1935 aa14.84□□□□□ -0.03
SHMT2-221ENST00000555773 ATRNL1Q5VV63 1379 aa14.84□□□□□ -0.03
SHMT2-221ENST00000555773 COL2A1P02458 1487 aaPredicted RBP14.83□□□□□ -0.03
SHMT2-221ENST00000555773 DDTLA6NHG4 134 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-221ENST00000555773 MINDY4BA8MYZ0 360 aa14.83□□□□□ -0.04
SHMT2-221ENST00000555773 MCCP23508 829 aa14.83□□□□□ -0.04
SHMT2-221ENST00000555773 SH3BP5LQ7L8J4 393 aa14.83□□□□□ -0.04
SHMT2-221ENST00000555773 USP48Q86UV5 1035 aa14.83□□□□□ -0.04
SHMT2-221ENST00000555773 METTL16Q86W50 562 aaKnown RBP14.83□□□□□ -0.04
SHMT2-221ENST00000555773 TEPSINQ96N21 525 aa14.83□□□□□ -0.04
SHMT2-221ENST00000555773 EHD4Q9H223 541 aa14.83□□□□□ -0.04
SHMT2-221ENST00000555773 AK9Q5TCS8 1911 aa14.83□□□□□ -0.04
SHMT2-221ENST00000555773 KIF3CO14782 793 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 TBC1D12O60347 775 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 POTEIP0CG38 1075 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 POTEJP0CG39 1038 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 PCP11498 1178 aaKnown RBP14.82□□□□□ -0.04
SHMT2-221ENST00000555773 ZKSCAN1P17029 563 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-221ENST00000555773 HSPA4P34932 840 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 NT5C2P49902 561 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 PLCD1P51178 756 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 MAP3K10Q02779 954 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 PPARAQ07869 468 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 TSGA10IPQ3SY00 556 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 CHADLQ6NUI6 762 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 KCNB2Q92953 911 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 CSRNP1Q96S65 589 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 ZNF287Q9HBT7 754 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 HERC5Q9UII4 1024 aaKnown RBP14.82□□□□□ -0.04
SHMT2-221ENST00000555773 SERPINB13Q9UIV8 391 aa14.82□□□□□ -0.04
SHMT2-221ENST00000555773 SLC27A2O14975 620 aa14.81□□□□□ -0.04
SHMT2-221ENST00000555773 CYP21A2P08686 494 aa14.81□□□□□ -0.04
SHMT2-221ENST00000555773 MAP1SQ66K74 1059 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-221ENST00000555773 CREB3L3Q68CJ9 461 aa14.81□□□□□ -0.04
SHMT2-221ENST00000555773 ZNF784Q8NCA9 323 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-221ENST00000555773 RNF41Q9H4P4 317 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-221ENST00000555773 SWAP70Q9UH65 585 aa14.81□□□□□ -0.04
SHMT2-221ENST00000555773 FGRP09769 529 aa14.8□□□□□ -0.04
SHMT2-221ENST00000555773 CYP2D6P10635 497 aa14.8□□□□□ -0.04
SHMT2-221ENST00000555773 GABPAQ06546 454 aa14.8□□□□□ -0.04
SHMT2-221ENST00000555773 PDE4BQ07343 736 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms