RNA–Protein interactions for RNA: ENST00000555626.5

PAPOLA-215, Transcript of poly(A) polymerase alpha, human

TSL 1 (best)

Gene PAPOLA, Length 2,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-215	ENST00000555626	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.93	□□□□□ -1.62
PAPOLA-215	ENST00000555626	P4HB	P07237	508 aa	Known RBP	4.93	□□□□□ -1.62
PAPOLA-215	ENST00000555626	PLCB3	Q01970	1234 aa		4.93	□□□□□ -1.62
PAPOLA-215	ENST00000555626	HYAL2	Q12891	473 aa		4.93	□□□□□ -1.62
PAPOLA-215	ENST00000555626	GALNT6	Q8NCL4	622 aa		4.93	□□□□□ -1.62
PAPOLA-215	ENST00000555626	PUS7	Q96PZ0	661 aa	Known RBP	4.93	□□□□□ -1.62
PAPOLA-215	ENST00000555626	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.93	□□□□□ -1.62
PAPOLA-215	ENST00000555626	BLM	P54132	1417 aa	Predicted RBP	4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	PTCH1	Q13635	1447 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	PARD3	Q8TEW0	1356 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	LOC102724428	A0A0B4J2F2	783 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	PHF20L1	A8MW92	1017 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	EIF1AY	O14602	144 aa	Known RBP	4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	CPNE3	O75131	537 aa	Known RBP	4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	HOXB4	P17483	251 aa	Predicted RBP	4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	SIK1	P57059	783 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	MLLT1	Q03111	559 aa	Predicted RBP	4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	KANK3	Q6NY19	840 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	NPM2	Q86SE8	214 aa	Known RBP	4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	GALNT12	Q8IXK2	581 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	ZSCAN1	Q8NBB4	408 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	NSUN5	Q96P11	429 aa	Known RBP	4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	KANSL3	Q9P2N6	904 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	CES1	P23141	567 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	TNNT2	P45379	298 aa	Predicted RBP	4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	TBC1D8B	Q0IIM8	1120 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	USPL1	Q5W0Q7	1092 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	C20orf204	Q6ZNR8	217 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	CHSY3	Q70JA7	882 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	FBXO33	Q7Z6M2	555 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	SVOP	Q8N4V2	548 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	BTBD6	Q96KE9	485 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	FRRS1L	Q9P0K9	344 aa		4.92	□□□□□ -1.62
PAPOLA-215	ENST00000555626	TECPR2	O15040	1411 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	ATRN	O75882	1429 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	NSD3	Q9BZ95	1437 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	RGPD8	O14715	1765 aa	Predicted RBP	4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	ALAS2	P22557	587 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	PPP2R1A	P30153	589 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	INSM1	Q01101	510 aa	Predicted RBP	4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	MAP3K10	Q02779	954 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	PERM1	Q5SV97	790 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	CEP120	Q8N960	986 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	LPIN3	Q9BQK8	851 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	IGFLR1	Q9H665	355 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	TERF2IP	Q9NYB0	399 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626		A0A1W2PP64	1363 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	ANKRD36B	Q8N2N9	1353 aa		4.91	□□□□□ -1.62
PAPOLA-215	ENST00000555626	MST1R	Q04912	1400 aa		4.9	□□□□□ -1.62
PAPOLA-215	ENST00000555626	PNMA6F	A0A0J9YX94	578 aa		4.9	□□□□□ -1.62
PAPOLA-215	ENST00000555626	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.9	□□□□□ -1.62
PAPOLA-215	ENST00000555626	FAM35A	Q86V20	835 aa		4.9	□□□□□ -1.62
PAPOLA-215	ENST00000555626	MORC1	Q86VD1	984 aa		4.9	□□□□□ -1.62
PAPOLA-215	ENST00000555626	PNISR	Q8TF01	805 aa	Known RBP	4.9	□□□□□ -1.62
PAPOLA-215	ENST00000555626	TTC9	Q92623	222 aa		4.9	□□□□□ -1.62
PAPOLA-215	ENST00000555626	PRDM6	Q9NQX0	595 aa		4.9	□□□□□ -1.62
PAPOLA-215	ENST00000555626	BRD4	O60885	1362 aa	Predicted RBP	4.9	□□□□□ -1.62
PAPOLA-215	ENST00000555626		J3QW42	95 aa		4.9	□□□□□ -1.63
PAPOLA-215	ENST00000555626	ALB	P02768	609 aa		4.9	□□□□□ -1.63
PAPOLA-215	ENST00000555626	EDN3	P14138	238 aa		4.9	□□□□□ -1.63
PAPOLA-215	ENST00000555626	CPB1	P15086	417 aa		4.9	□□□□□ -1.63
PAPOLA-215	ENST00000555626	DGKG	P49619	791 aa		4.9	□□□□□ -1.63
PAPOLA-215	ENST00000555626	PEAR1	Q5VY43	1037 aa	Predicted RBP	4.9	□□□□□ -1.63
PAPOLA-215	ENST00000555626	HFE2	Q6ZVN8	426 aa		4.9	□□□□□ -1.63
PAPOLA-215	ENST00000555626	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.9	□□□□□ -1.63	3e-8	■□□□□ 11.3
PAPOLA-215	ENST00000555626	CGNL1	Q0VF96	1302 aa		4.9	□□□□□ -1.63
PAPOLA-215	ENST00000555626	PRR36	Q9H6K5	1346 aa		4.9	□□□□□ -1.63
PAPOLA-215	ENST00000555626	XRN1	Q8IZH2	1706 aa	Known RBP	4.9	□□□□□ -1.63
PAPOLA-215	ENST00000555626	PPIP5K1	Q6PFW1	1433 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	CD163L1	Q9NR16	1453 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	POLR3D	P05423	398 aa	Predicted RBP	4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	EIF2AK2	P19525	551 aa	Known RBP	4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	YY1	P25490	414 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	GRIK5	Q16478	980 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	MICALL1	Q8N3F8	863 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	FBF1	Q8TES7	1133 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	CCDC74A	Q96AQ1	378 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	ENAM	Q9NRM1	1142 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	NPC1L1	Q9UHC9	1359 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	EP400	Q96L91	3159 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	NFKBIE	O00221	500 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	ACPP	P15309	386 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	MAPK8	P45983	427 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	ATP11A	P98196	1134 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	COL9A3	Q14050	684 aa	Predicted RBP	4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	PSAPL1	Q6NUJ1	521 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	NCAPG2	Q86XI2	1143 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	PMFBP1	Q8TBY8	1022 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	PLD4	Q96BZ4	506 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	SETDB2	Q96T68	719 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	LATS2	Q9NRM7	1088 aa		4.89	□□□□□ -1.63
PAPOLA-215	ENST00000555626	NINL	Q9Y2I6	1382 aa		4.88	□□□□□ -1.63
PAPOLA-215	ENST00000555626	ITSN1	Q15811	1721 aa		4.88	□□□□□ -1.63
PAPOLA-215	ENST00000555626	FYB1	O15117	783 aa		4.88	□□□□□ -1.63
PAPOLA-215	ENST00000555626	GHRH	P01286	108 aa		4.88	□□□□□ -1.63
PAPOLA-215	ENST00000555626	BAG6	P46379	1132 aa		4.88	□□□□□ -1.63
PAPOLA-215	ENST00000555626	EAPP	Q56P03	285 aa	Predicted RBP	4.88	□□□□□ -1.63
PAPOLA-215	ENST00000555626	KIAA0319	Q5VV43	1072 aa		4.88	□□□□□ -1.63

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