RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 MORC2Q9Y6X9 1032 aaPredicted RBP18.65■□□□□ 0.58
TUBB3-209ENST00000555609 ANKRD36CQ5JPF3 1778 aa18.64■□□□□ 0.58
TUBB3-209ENST00000555609 LRP5O75197 1615 aa18.64■□□□□ 0.57
TUBB3-209ENST00000555609 LRP6O75581 1613 aa18.64■□□□□ 0.57
TUBB3-209ENST00000555609 A0A087WWV3 80 aa18.64■□□□□ 0.57
TUBB3-209ENST00000555609 SLC5A1P13866 664 aa18.64■□□□□ 0.57
TUBB3-209ENST00000555609 CDC27P30260 824 aa18.64■□□□□ 0.57
TUBB3-209ENST00000555609 SAFBQ15424 915 aaKnown RBP eCLIP18.64■□□□□ 0.57
TUBB3-209ENST00000555609 HLFQ16534 295 aa18.64■□□□□ 0.57
TUBB3-209ENST00000555609 E4F1Q66K89 784 aaPredicted RBP18.64■□□□□ 0.57
TUBB3-209ENST00000555609 CCDC85AQ96PX6 553 aaPredicted RBP18.64■□□□□ 0.57
TUBB3-209ENST00000555609 TRMT112Q9UI30 125 aaKnown RBP18.64■□□□□ 0.57
TUBB3-209ENST00000555609 ABCA3Q99758 1704 aa18.64■□□□□ 0.57
TUBB3-209ENST00000555609 MROH7-TTC4A0A0A0MT08 1334 aa18.64■□□□□ 0.57
TUBB3-209ENST00000555609 MYH3P11055 1940 aa18.63■□□□□ 0.57
TUBB3-209ENST00000555609 B4E1Z4 1266 aa18.63■□□□□ 0.57
TUBB3-209ENST00000555609 CYP19A1P11511 503 aaPredicted RBP18.63■□□□□ 0.57
TUBB3-209ENST00000555609 MARCKSP29966 332 aaPredicted RBP18.63■□□□□ 0.57
TUBB3-209ENST00000555609 ARID3AQ99856 593 aa18.63■□□□□ 0.57
TUBB3-209ENST00000555609 DDX41Q9UJV9 622 aaKnown RBP18.63■□□□□ 0.57
TUBB3-209ENST00000555609 SLC12A7Q9Y666 1083 aa18.63■□□□□ 0.57
TUBB3-209ENST00000555609 ARAP2Q8WZ64 1704 aa18.63■□□□□ 0.57
TUBB3-209ENST00000555609 CCDC196A0A1B0GTZ2 297 aa18.63■□□□□ 0.57
TUBB3-209ENST00000555609 KRBA2Q6ZNG9 492 aa18.63■□□□□ 0.57
TUBB3-209ENST00000555609 IFNL3Q8IZI9 196 aa18.63■□□□□ 0.57
TUBB3-209ENST00000555609 KRI1Q8N9T8 703 aaKnown RBP18.63■□□□□ 0.57
TUBB3-209ENST00000555609 PPP1R13BQ96KQ4 1090 aa18.63■□□□□ 0.57
TUBB3-209ENST00000555609 FAM217BQ9NTX9 383 aaPredicted RBP18.63■□□□□ 0.57
TUBB3-209ENST00000555609 TRMT1Q9NXH9 659 aaKnown RBP18.63■□□□□ 0.57
TUBB3-209ENST00000555609 DACH1Q9UI36 760 aa18.63■□□□□ 0.57
TUBB3-209ENST00000555609 TIAM2Q8IVF5 1701 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 BIN1O00499 593 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 IL6STP40189 918 aaPredicted RBP18.62■□□□□ 0.57
TUBB3-209ENST00000555609 PHKA1P46020 1223 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 SART3Q15020 963 aaKnown RBP18.62■□□□□ 0.57
TUBB3-209ENST00000555609 PPP2R5BQ15173 497 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 AKNAD1Q5T1N1 836 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 ZNF579Q8NAF0 562 aaKnown RBP18.62■□□□□ 0.57
TUBB3-209ENST00000555609 SPATA5Q8NB90 893 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 NAPBQ9H115 298 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 FOXP1Q9H334 677 aaPredicted RBP18.62■□□□□ 0.57
TUBB3-209ENST00000555609 GJB4Q9NTQ9 266 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 KCNH3Q9ULD8 1083 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 UBN2Q6ZU65 1347 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 PNPLA7Q6ZV29 1317 aa18.62■□□□□ 0.57
TUBB3-209ENST00000555609 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-209ENST00000555609 UBASH3AP57075 661 aa18.61■□□□□ 0.57
TUBB3-209ENST00000555609 CT47A1Q5JQC4 288 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-209ENST00000555609 KANK3Q6NY19 840 aa18.61■□□□□ 0.57
TUBB3-209ENST00000555609 RAB11FIP4Q86YS3 637 aa18.61■□□□□ 0.57
TUBB3-209ENST00000555609 TRIM22Q8IYM9 498 aa18.61■□□□□ 0.57
TUBB3-209ENST00000555609 ZNF34Q8IZ26 560 aa18.61■□□□□ 0.57
TUBB3-209ENST00000555609 STAG1Q8WVM7 1258 aa18.61■□□□□ 0.57
TUBB3-209ENST00000555609 FBXW7Q969H0 707 aa18.61■□□□□ 0.57
TUBB3-209ENST00000555609 TMX1Q9H3N1 280 aa18.61■□□□□ 0.57
TUBB3-209ENST00000555609 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
TUBB3-209ENST00000555609 ZNF215Q9UL58 517 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-209ENST00000555609 WWC3Q9ULE0 1092 aa18.61■□□□□ 0.57
TUBB3-209ENST00000555609 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
TUBB3-209ENST00000555609 GPTP24298 496 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 RILPL1Q5EBL4 403 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 MICU3Q86XE3 530 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 NOSTRINQ8IVI9 506 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 TRIML1Q8N9V2 468 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 CNNM3Q8NE01 707 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 HSD3B7Q9H2F3 369 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 RNF41Q9H4P4 317 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-209ENST00000555609 CEP131Q9UPN4 1083 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 BCL9O00512 1426 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 RANBP6O60518 1105 aaKnown RBP18.6■□□□□ 0.57
TUBB3-209ENST00000555609 ADAMTS2O95450 1211 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 GABPB1Q06547 395 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-209ENST00000555609 MFSD6Q6ZSS7 791 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 VSTM4Q8IW00 320 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 AIFM3Q96NN9 605 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 SRRTQ9BXP5 876 aaKnown RBP18.6■□□□□ 0.57
TUBB3-209ENST00000555609 ZSWIM5Q9P217 1185 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 PHLPP2Q6ZVD8 1323 aa18.6■□□□□ 0.57
TUBB3-209ENST00000555609 SERPINC1P01008 464 aa18.59■□□□□ 0.57
TUBB3-209ENST00000555609 MMP1P03956 469 aa18.59■□□□□ 0.57
TUBB3-209ENST00000555609 LMOD1P29536 600 aaPredicted RBP18.59■□□□□ 0.57
TUBB3-209ENST00000555609 CCDC93Q567U6 631 aa18.59■□□□□ 0.57
TUBB3-209ENST00000555609 NT5DC1Q5TFE4 455 aa18.59■□□□□ 0.57
TUBB3-209ENST00000555609 SYNE4Q8N205 404 aa18.59■□□□□ 0.57
TUBB3-209ENST00000555609 MLKLQ8NB16 471 aa18.59■□□□□ 0.57
TUBB3-209ENST00000555609 PHKBQ93100 1093 aa18.59■□□□□ 0.57
TUBB3-209ENST00000555609 BCL11BQ9C0K0 894 aaPredicted RBP18.59■□□□□ 0.57
TUBB3-209ENST00000555609 GOLGA6L9A6NEM1 432 aa18.58■□□□□ 0.57
TUBB3-209ENST00000555609 KIF20AO95235 890 aa18.58■□□□□ 0.57
TUBB3-209ENST00000555609 DEXIO95424 95 aa18.58■□□□□ 0.57
TUBB3-209ENST00000555609 PTPREP23469 700 aa18.58■□□□□ 0.57
TUBB3-209ENST00000555609 CCDC34Q96HJ3 373 aa18.58■□□□□ 0.57
TUBB3-209ENST00000555609 SLC26A6Q9BXS9 759 aa18.58■□□□□ 0.57
TUBB3-209ENST00000555609 ERICH2A1L162 156 aa18.58■□□□□ 0.56
TUBB3-209ENST00000555609 ZSCAN12O43309 604 aa18.58■□□□□ 0.56
TUBB3-209ENST00000555609 MDM2Q00987 491 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-209ENST00000555609 METTL16Q86W50 562 aaKnown RBP18.58■□□□□ 0.56
TUBB3-209ENST00000555609 RTL9Q8NET4 1388 aa18.58■□□□□ 0.56
TUBB3-209ENST00000555609 DOCK2Q92608 1830 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms