RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MAPKAPK5Q8IW41 473 aa11.85□□□□□ -0.51
PSEN1-213ENST00000555386 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
PSEN1-213ENST00000555386 TGFBRAP1Q8WUH2 860 aa11.85□□□□□ -0.51
PSEN1-213ENST00000555386 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-213ENST00000555386 PCNTO95613 3336 aa11.85□□□□□ -0.51
PSEN1-213ENST00000555386 TCRBV5S4A2TA0A5A2 114 aa11.84□□□□□ -0.51
PSEN1-213ENST00000555386 RNF113AO15541 343 aaKnown RBP11.84□□□□□ -0.51
PSEN1-213ENST00000555386 MBD4O95243 580 aa11.84□□□□□ -0.51
PSEN1-213ENST00000555386 SLC4A3P48751 1232 aa11.84□□□□□ -0.51
PSEN1-213ENST00000555386 RHBDL3P58872 404 aa11.84□□□□□ -0.51
PSEN1-213ENST00000555386 NBPF12Q5TAG4 269 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-213ENST00000555386 MOB2Q70IA6 237 aa11.84□□□□□ -0.51
PSEN1-213ENST00000555386 EVI5LQ96CN4 794 aa11.84□□□□□ -0.51
PSEN1-213ENST00000555386 ARMT1Q9H993 441 aa11.84□□□□□ -0.51
PSEN1-213ENST00000555386 DDX4Q9NQI0 724 aaKnown RBP11.84□□□□□ -0.51
PSEN1-213ENST00000555386 SAP30BPQ9UHR5 308 aaKnown RBP11.84□□□□□ -0.51
PSEN1-213ENST00000555386 ABT1Q9ULW3 272 aaKnown RBP11.84□□□□□ -0.51
PSEN1-213ENST00000555386 MYH1P12882 1939 aa11.84□□□□□ -0.51
PSEN1-213ENST00000555386 BAZ2AQ9UIF9 1905 aaKnown RBP11.84□□□□□ -0.51
PSEN1-213ENST00000555386 CNTNAP1P78357 1384 aa11.84□□□□□ -0.51
PSEN1-213ENST00000555386 PASKQ96RG2 1323 aa11.84□□□□□ -0.51
PSEN1-213ENST00000555386 USP5P45974 858 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 APLP1P51693 650 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 GRM1Q13255 1194 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 NFKBIBQ15653 356 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 CST9Q5W186 159 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
PSEN1-213ENST00000555386 LCORLQ8N3X6 602 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 C22orf23Q9BZE7 217 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 FAM198AQ9UFP1 575 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 TMEM88BA6NKF7 163 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 WDHD1O75717 1129 aaPredicted RBP11.83□□□□□ -0.52
PSEN1-213ENST00000555386 GSPT1P15170 499 aaKnown RBP11.83□□□□□ -0.52
PSEN1-213ENST00000555386 PLCG2P16885 1265 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 HSPA6P17066 643 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 NF2P35240 595 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 TTC22Q5TAA0 569 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 MIGA2Q7L4E1 593 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 SEC62Q99442 399 aaKnown RBP11.83□□□□□ -0.52
PSEN1-213ENST00000555386 PUS7LQ9H0K6 701 aaKnown RBP11.83□□□□□ -0.52
PSEN1-213ENST00000555386 OSBPL3Q9H4L5 887 aa11.83□□□□□ -0.52
PSEN1-213ENST00000555386 M0R2C6 588 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 PRKAB2O43741 272 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 SLURP2P0DP57 97 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 PPP4CP60510 307 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 UBE3CQ15386 1083 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 LRRFIP1Q32MZ4 808 aaKnown RBP11.82□□□□□ -0.52
PSEN1-213ENST00000555386 CCDC129Q6ZRS4 1044 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 C2orf69Q8N8R5 385 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 SDR42E1Q8WUS8 393 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 FAM151AQ8WW52 585 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 OSBP2Q969R2 916 aa11.82□□□□□ -0.52
PSEN1-213ENST00000555386 CRNKL1Q9BZJ0 848 aaKnown RBP11.82□□□□□ -0.52
PSEN1-213ENST00000555386 GBA2Q9HCG7 927 aaPredicted RBP11.82□□□□□ -0.52
PSEN1-213ENST00000555386 FOCADQ5VW36 1801 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 NAV1Q8NEY1 1877 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 UBE2Q2LH0YL09 131 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 ZFYP08048 801 aaPredicted RBP11.81□□□□□ -0.52
PSEN1-213ENST00000555386 SDSP20132 328 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 RBM25P49756 843 aaKnown RBP11.81□□□□□ -0.52
PSEN1-213ENST00000555386 SUPT20HL1Q3ZLR7 823 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 FAM83AQ86UY5 434 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 APPBP2Q92624 585 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 FAM227BQ96M60 508 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 CSRNP1Q96S65 589 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 RIOK1Q9BRS2 568 aaKnown RBP11.81□□□□□ -0.52
PSEN1-213ENST00000555386 IDI2Q9BXS1 227 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 MKRN1Q9UHC7 482 aaKnown RBP11.81□□□□□ -0.52
PSEN1-213ENST00000555386 PALD1Q9ULE6 856 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 ANGEL1Q9UNK9 670 aaKnown RBP11.81□□□□□ -0.52
PSEN1-213ENST00000555386 PPP2R3BQ9Y5P8 575 aa11.81□□□□□ -0.52
PSEN1-213ENST00000555386 FLT1P17948 1338 aa11.8□□□□□ -0.52
PSEN1-213ENST00000555386 DDTLA6NHG4 134 aaPredicted RBP11.8□□□□□ -0.52
PSEN1-213ENST00000555386 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
PSEN1-213ENST00000555386 APPP05067 770 aa11.8□□□□□ -0.52
PSEN1-213ENST00000555386 HUNKP57058 714 aa11.8□□□□□ -0.52
PSEN1-213ENST00000555386 NMIQ13287 307 aaPredicted RBP11.8□□□□□ -0.52
PSEN1-213ENST00000555386 FKBP1CQ5VVH2 108 aa11.8□□□□□ -0.52
PSEN1-213ENST00000555386 SH3BP5LQ7L8J4 393 aa11.8□□□□□ -0.52
PSEN1-213ENST00000555386 TEPSINQ96N21 525 aa11.8□□□□□ -0.52
PSEN1-213ENST00000555386 OSBPL5Q9H0X9 879 aaPredicted RBP11.8□□□□□ -0.52
PSEN1-213ENST00000555386 DIAPH3Q9NSV4 1193 aa11.8□□□□□ -0.52
PSEN1-213ENST00000555386 SLC4A4Q9Y6R1 1079 aa11.8□□□□□ -0.52
PSEN1-213ENST00000555386 SSC5DA1L4H1 1573 aa11.79□□□□□ -0.52
PSEN1-213ENST00000555386 A0A0D9SFI3 127 aa11.79□□□□□ -0.52
PSEN1-213ENST00000555386 GPAA1O43292 621 aa11.79□□□□□ -0.52
PSEN1-213ENST00000555386 PPP1R12BO60237 982 aaPredicted RBP11.79□□□□□ -0.52
PSEN1-213ENST00000555386 ENTPD3O75355 529 aa11.79□□□□□ -0.52
PSEN1-213ENST00000555386 MFAP1P55081 439 aaKnown RBP11.79□□□□□ -0.52
PSEN1-213ENST00000555386 ZMYM1Q5SVZ6 1142 aa11.79□□□□□ -0.52
PSEN1-213ENST00000555386 CWC27Q6UX04 472 aaKnown RBP11.79□□□□□ -0.52
PSEN1-213ENST00000555386 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
PSEN1-213ENST00000555386 TBC1D2Q9BYX2 928 aa11.79□□□□□ -0.52
PSEN1-213ENST00000555386 MCM9Q9NXL9 1143 aa11.79□□□□□ -0.52
PSEN1-213ENST00000555386 RFX7Q2KHR2 1363 aa11.78□□□□□ -0.52
PSEN1-213ENST00000555386 IGSF3O75054 1194 aa11.78□□□□□ -0.52
PSEN1-213ENST00000555386 POLR3DP05423 398 aaPredicted RBP11.78□□□□□ -0.52
PSEN1-213ENST00000555386 ARMC9Q7Z3E5 817 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms