RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 RASAL3Q86YV0 1011 aa15.03■□□□□ -0
SYNE2-214ENST00000554928 HHIPL1Q96JK4 782 aa15.03■□□□□ -0
SYNE2-214ENST00000554928 DOCK2Q92608 1830 aa15.03■□□□□ -0
SYNE2-214ENST00000554928 TCRBV5S4A2TA0A5A2 114 aa15.02■□□□□ -0
SYNE2-214ENST00000554928 PPP4CP60510 307 aa15.02■□□□□ -0
SYNE2-214ENST00000554928 MKRN3Q13064 507 aaKnown RBP15.02■□□□□ -0
SYNE2-214ENST00000554928 MAP3K11Q16584 847 aa15.02■□□□□ -0
SYNE2-214ENST00000554928 TEX11Q8IYF3 940 aa15.02■□□□□ -0
SYNE2-214ENST00000554928 ATRNL1Q5VV63 1379 aa15.01□□□□□ -0.01
SYNE2-214ENST00000554928 RPAP1Q9BWH6 1393 aaPredicted RBP15.01□□□□□ -0.01
SYNE2-214ENST00000554928 ZNF532Q9HCE3 1301 aa15.01□□□□□ -0.01
SYNE2-214ENST00000554928 SLC10A3P09131 477 aa15.01□□□□□ -0.01
SYNE2-214ENST00000554928 MX1P20591 662 aa15.01□□□□□ -0.01
SYNE2-214ENST00000554928 MAP3K12Q12852 859 aa15.01□□□□□ -0.01
SYNE2-214ENST00000554928 SLC9C2Q5TAH2 1124 aa15.01□□□□□ -0.01
SYNE2-214ENST00000554928 ARMC9Q7Z3E5 817 aa15.01□□□□□ -0.01
SYNE2-214ENST00000554928 THSD7BQ9C0I4 1608 aa15□□□□□ -0.01
SYNE2-214ENST00000554928 ENTPD3O75355 529 aa15□□□□□ -0.01
SYNE2-214ENST00000554928 GJA5P36382 358 aa15□□□□□ -0.01
SYNE2-214ENST00000554928 ECE1P42892 770 aa15□□□□□ -0.01
SYNE2-214ENST00000554928 NUCB1Q02818 461 aa15□□□□□ -0.01
SYNE2-214ENST00000554928 TTF1Q15361 905 aaPredicted RBP15□□□□□ -0.01
SYNE2-214ENST00000554928 PPP1R3FQ6ZSY5 799 aaPredicted RBP15□□□□□ -0.01
SYNE2-214ENST00000554928 MAPKAPK5Q8IW41 473 aa15□□□□□ -0.01
SYNE2-214ENST00000554928 TGFBRAP1Q8WUH2 860 aa15□□□□□ -0.01
SYNE2-214ENST00000554928 RIOK1Q9BRS2 568 aaKnown RBP15□□□□□ -0.01
SYNE2-214ENST00000554928 FAM196BA6NMK8 535 aa14.99□□□□□ -0.01
SYNE2-214ENST00000554928 PPP1R12BO60237 982 aaPredicted RBP14.99□□□□□ -0.01
SYNE2-214ENST00000554928 HSPA1AP0DMV8 641 aaKnown RBP14.99□□□□□ -0.01
SYNE2-214ENST00000554928 HSPA1BP0DMV9 641 aaKnown RBP14.99□□□□□ -0.01
SYNE2-214ENST00000554928 ADD2P35612 726 aa14.99□□□□□ -0.01
SYNE2-214ENST00000554928 KIF23Q02241 960 aaPredicted RBP14.99□□□□□ -0.01
SYNE2-214ENST00000554928 CHD1LQ86WJ1 897 aa14.99□□□□□ -0.01
SYNE2-214ENST00000554928 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.99□□□□□ -0.01
SYNE2-214ENST00000554928 OSBPL5Q9H0X9 879 aaPredicted RBP14.99□□□□□ -0.01
SYNE2-214ENST00000554928 FLT1P17948 1338 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 TTC41PQ6P2S7 1318 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 BAG3O95817 575 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 INPP5BP32019 993 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 PDE1AP54750 535 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 EVX2Q03828 476 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 VGLL4Q14135 290 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 SLC4A8Q2Y0W8 1093 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 ZSCAN29Q8IWY8 852 aaPredicted RBP14.98□□□□□ -0.01
SYNE2-214ENST00000554928 LCORLQ8N3X6 602 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 ZKSCAN4Q969J2 545 aaPredicted RBP14.98□□□□□ -0.01
SYNE2-214ENST00000554928 GPATCH3Q96I76 525 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 CSRNP1Q96S65 589 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 ELP3Q9H9T3 547 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 STAP2Q9UGK3 403 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 SAP30BPQ9UHR5 308 aaKnown RBP14.98□□□□□ -0.01
SYNE2-214ENST00000554928 OTOFQ9HC10 1997 aa14.98□□□□□ -0.01
SYNE2-214ENST00000554928 PDE4AP27815 886 aa14.97□□□□□ -0.01
SYNE2-214ENST00000554928 IREB2P48200 963 aaKnown RBP14.97□□□□□ -0.01
SYNE2-214ENST00000554928 CCDC102AQ96A19 550 aa14.97□□□□□ -0.01
SYNE2-214ENST00000554928 WRNIP1Q96S55 665 aa14.97□□□□□ -0.01
SYNE2-214ENST00000554928 NOL10Q9BSC4 688 aaKnown RBP14.97□□□□□ -0.01
SYNE2-214ENST00000554928 ARMT1Q9H993 441 aa14.97□□□□□ -0.01
SYNE2-214ENST00000554928 WBP1LQ9NX94 342 aa14.97□□□□□ -0.01
SYNE2-214ENST00000554928 SNCAIPQ9Y6H5 919 aa14.97□□□□□ -0.01
SYNE2-214ENST00000554928 MAGEB6P1A0A0J9YX57 407 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 PHF20L1A8MW92 1017 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 PRKAB2O43741 272 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 IGSF3O75054 1194 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 GLRX3O76003 335 aaKnown RBP14.96□□□□□ -0.01
SYNE2-214ENST00000554928 MAP3K9P80192 1104 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 NOGQ13253 232 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 RRP1BQ14684 758 aaKnown RBP14.96□□□□□ -0.01
SYNE2-214ENST00000554928 PLEKHM2Q8IWE5 1019 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 ANKRD13AQ8IZ07 590 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 KBTBD3Q8NAB2 608 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 SLC10A4Q96EP9 437 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 WNK4Q96J92 1243 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 ZNF341Q9BYN7 854 aa14.96□□□□□ -0.01
SYNE2-214ENST00000554928 PUS7LQ9H0K6 701 aaKnown RBP14.96□□□□□ -0.01
SYNE2-214ENST00000554928 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.96□□□□□ -0.01
SYNE2-214ENST00000554928 FOXN1O15353 648 aa14.95□□□□□ -0.02
SYNE2-214ENST00000554928 MBD4O95243 580 aa14.95□□□□□ -0.02
SYNE2-214ENST00000554928 PLCG2P16885 1265 aa14.95□□□□□ -0.02
SYNE2-214ENST00000554928 MAP2K2P36507 400 aa14.95□□□□□ -0.02
SYNE2-214ENST00000554928 SPRYD7Q5W111 196 aa14.95□□□□□ -0.02
SYNE2-214ENST00000554928 SDR42E1Q8WUS8 393 aa14.95□□□□□ -0.02
SYNE2-214ENST00000554928 DNAJC18Q9H819 358 aa14.95□□□□□ -0.02
SYNE2-214ENST00000554928 ZBTB47Q9UFB7 747 aaPredicted RBP14.95□□□□□ -0.02
SYNE2-214ENST00000554928 TSKSQ9UJT2 592 aa14.95□□□□□ -0.02
SYNE2-214ENST00000554928 ZNF112Q9UJU3 913 aa14.95□□□□□ -0.02
SYNE2-214ENST00000554928 PALD1Q9ULE6 856 aa14.95□□□□□ -0.02
SYNE2-214ENST00000554928 SIPA1L1O43166 1804 aa14.94□□□□□ -0.02
SYNE2-214ENST00000554928 SMIM22K7EJ46 135 aa14.94□□□□□ -0.02
SYNE2-214ENST00000554928 ERC2O15083 957 aa14.94□□□□□ -0.02
SYNE2-214ENST00000554928 MAP3K10Q02779 954 aa14.94□□□□□ -0.02
SYNE2-214ENST00000554928 UBE3CQ15386 1083 aa14.94□□□□□ -0.02
SYNE2-214ENST00000554928 DCAF15Q66K64 600 aa14.94□□□□□ -0.02
SYNE2-214ENST00000554928 SKAP1Q86WV1 359 aa14.94□□□□□ -0.02
SYNE2-214ENST00000554928 OSBP2Q969R2 916 aa14.94□□□□□ -0.02
SYNE2-214ENST00000554928 SEC62Q99442 399 aaKnown RBP14.94□□□□□ -0.02
SYNE2-214ENST00000554928 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.94□□□□□ -0.02
SYNE2-214ENST00000554928 CDK5RAP2Q96SN8 1893 aa14.94□□□□□ -0.02
SYNE2-214ENST00000554928 M0R2C6 588 aa14.93□□□□□ -0.02
SYNE2-214ENST00000554928 CYP2D6P10635 497 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms