RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 GSG1L2A8MUP6 293 aa19.67■□□□□ 0.74
SPTLC2-203ENST00000554901 RASA3Q14644 834 aa19.67■□□□□ 0.74
SPTLC2-203ENST00000554901 ALX1Q15699 326 aa19.67■□□□□ 0.74
SPTLC2-203ENST00000554901 KRT26Q7Z3Y9 468 aa19.67■□□□□ 0.74
SPTLC2-203ENST00000554901 DSCC1Q9BVC3 393 aa19.67■□□□□ 0.74
SPTLC2-203ENST00000554901 OSBPL5Q9H0X9 879 aaPredicted RBP19.67■□□□□ 0.74
SPTLC2-203ENST00000554901 DDX4Q9NQI0 724 aaKnown RBP19.67■□□□□ 0.74
SPTLC2-203ENST00000554901 ZMYM6O95789 1325 aa19.67■□□□□ 0.74
SPTLC2-203ENST00000554901 CNTNAP1P78357 1384 aa19.67■□□□□ 0.74
SPTLC2-203ENST00000554901 ATRNL1Q5VV63 1379 aa19.67■□□□□ 0.74
SPTLC2-203ENST00000554901 PRKAB2O43741 272 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 POTEIP0CG38 1075 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 POTEJP0CG39 1038 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 HSPD1P10809 573 aaKnown RBP19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 CHADLQ6NUI6 762 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 KIAA1211Q6ZU35 1233 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 MAPKAPK5Q8IW41 473 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 SDR42E1Q8WUS8 393 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 IL25Q9H293 177 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 FOCADQ5VW36 1801 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 PICALMQ13492 652 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 TAOK2Q9UL54 1235 aa19.66■□□□□ 0.74
SPTLC2-203ENST00000554901 EPB41L2O43491 1005 aaKnown RBP19.65■□□□□ 0.74
SPTLC2-203ENST00000554901 TOMM70O94826 608 aa19.65■□□□□ 0.74
SPTLC2-203ENST00000554901 APPP05067 770 aa19.65■□□□□ 0.74
SPTLC2-203ENST00000554901 TCP10Q12799 353 aa19.65■□□□□ 0.74
SPTLC2-203ENST00000554901 AMOTL1Q8IY63 956 aa19.65■□□□□ 0.74
SPTLC2-203ENST00000554901 IFNL3Q8IZI9 196 aa19.65■□□□□ 0.74
SPTLC2-203ENST00000554901 RBM46Q8TBY0 533 aaKnown RBP19.65■□□□□ 0.74
SPTLC2-203ENST00000554901 HOOK2Q96ED9 719 aa19.65■□□□□ 0.74
SPTLC2-203ENST00000554901 ARPP21Q9UBL0 812 aaPredicted RBP19.65■□□□□ 0.74
SPTLC2-203ENST00000554901 CDK5RAP2Q96SN8 1893 aa19.64■□□□□ 0.73
SPTLC2-203ENST00000554901 FOXP2O15409 715 aa19.64■□□□□ 0.73
SPTLC2-203ENST00000554901 REC8O95072 547 aa19.64■□□□□ 0.73
SPTLC2-203ENST00000554901 SBK1Q52WX2 424 aa19.64■□□□□ 0.73
SPTLC2-203ENST00000554901 VPS53Q5VIR6 699 aa19.64■□□□□ 0.73
SPTLC2-203ENST00000554901 TTC6Q86TZ1 520 aa19.64■□□□□ 0.73
SPTLC2-203ENST00000554901 NAPBQ9H115 298 aa19.64■□□□□ 0.73
SPTLC2-203ENST00000554901 EPB41L4AQ9HCS5 686 aaPredicted RBP19.64■□□□□ 0.73
SPTLC2-203ENST00000554901 MCM9Q9NXL9 1143 aa19.64■□□□□ 0.73
SPTLC2-203ENST00000554901 TDO2P48775 406 aa19.63■□□□□ 0.73
SPTLC2-203ENST00000554901 SUPT20HL1Q3ZLR7 823 aa19.63■□□□□ 0.73
SPTLC2-203ENST00000554901 MAP1SQ66K74 1059 aaPredicted RBP19.63■□□□□ 0.73
SPTLC2-203ENST00000554901 SMC1BQ8NDV3 1235 aa19.63■□□□□ 0.73
SPTLC2-203ENST00000554901 TEPSINQ96N21 525 aa19.63■□□□□ 0.73
SPTLC2-203ENST00000554901 TMEM39BQ9GZU3 492 aa19.63■□□□□ 0.73
SPTLC2-203ENST00000554901 CTNNA3Q9UI47 895 aa19.63■□□□□ 0.73
SPTLC2-203ENST00000554901 HLA-DOAP06340 250 aa19.62■□□□□ 0.73
SPTLC2-203ENST00000554901 USP48Q86UV5 1035 aa19.62■□□□□ 0.73
SPTLC2-203ENST00000554901 ZSCAN29Q8IWY8 852 aaPredicted RBP19.62■□□□□ 0.73
SPTLC2-203ENST00000554901 ZFPM1Q8IX07 1006 aa19.62■□□□□ 0.73
SPTLC2-203ENST00000554901 MAP4K1Q92918 833 aa19.62■□□□□ 0.73
SPTLC2-203ENST00000554901 ANO2Q9NQ90 1003 aa19.62■□□□□ 0.73
SPTLC2-203ENST00000554901 PI4KBQ9UBF8 816 aa19.62■□□□□ 0.73
SPTLC2-203ENST00000554901 FGAP02671 866 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 POLR3DP05423 398 aaPredicted RBP19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 DDX60LQ5H9U9 1706 aaKnown RBP19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 CSRNP1Q96S65 589 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 GLIS2Q9BZE0 524 aaPredicted RBP19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 LSG1Q9H089 658 aaKnown RBP19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 EHD4Q9H223 541 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 NAV1Q8NEY1 1877 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 DDTLA6NHG4 134 aaPredicted RBP19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 USP17L12C9JPN9 530 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 ADM5C9JUS6 153 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 USP17L21D6R901 530 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 FSTL1Q12841 308 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 C8orf34Q49A92 452 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 C12orf60Q5U649 245 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 CTR9Q6PD62 1173 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 SH3BP5LQ7L8J4 393 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 METTL16Q86W50 562 aaKnown RBP19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 FOXP4Q8IVH2 680 aaPredicted RBP19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 PALD1Q9ULE6 856 aa19.61■□□□□ 0.73
SPTLC2-203ENST00000554901 POLR2AP24928 1970 aaKnown RBP19.6■□□□□ 0.73
SPTLC2-203ENST00000554901 TBC1D12O60347 775 aa19.6■□□□□ 0.73
SPTLC2-203ENST00000554901 NF2P35240 595 aa19.6■□□□□ 0.73
SPTLC2-203ENST00000554901 CDCA5Q96FF9 252 aa19.6■□□□□ 0.73
SPTLC2-203ENST00000554901 SAP30BPQ9UHR5 308 aaKnown RBP19.6■□□□□ 0.73
SPTLC2-203ENST00000554901 HERC5Q9UII4 1024 aaKnown RBP19.6■□□□□ 0.73
SPTLC2-203ENST00000554901 ITGBL1O95965 494 aaPredicted RBP19.59■□□□□ 0.73
SPTLC2-203ENST00000554901 MAP3K10Q02779 954 aa19.59■□□□□ 0.73
SPTLC2-203ENST00000554901 PTH1RQ03431 593 aa19.59■□□□□ 0.73
SPTLC2-203ENST00000554901 ANAPC4Q9UJX5 808 aa19.59■□□□□ 0.73
SPTLC2-203ENST00000554901 SCAF8Q9UPN6 1271 aaKnown RBP19.59■□□□□ 0.73
SPTLC2-203ENST00000554901 MYH1P12882 1939 aa19.58■□□□□ 0.73
SPTLC2-203ENST00000554901 NBPF12Q5TAG4 269 aaPredicted RBP19.58■□□□□ 0.73
SPTLC2-203ENST00000554901 DCAF15Q66K64 600 aa19.58■□□□□ 0.73
SPTLC2-203ENST00000554901 SERPINB13Q9UIV8 391 aa19.58■□□□□ 0.73
SPTLC2-203ENST00000554901 ROBO3Q96MS0 1386 aa19.58■□□□□ 0.72
SPTLC2-203ENST00000554901 SLC3A2P08195 630 aaKnown RBP19.57■□□□□ 0.72
SPTLC2-203ENST00000554901 IMMTQ16891 758 aaKnown RBP19.57■□□□□ 0.72
SPTLC2-203ENST00000554901 PCP11498 1178 aaKnown RBP19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 PLCD1P51178 756 aa19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 PPARAQ07869 468 aa19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 ZNF287Q9HBT7 754 aa19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 SWAP70Q9UH65 585 aa19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 RBM8AQ9Y5S9 174 aaKnown RBP19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 BAZ2AQ9UIF9 1905 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms