RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 SMCR8Q8TEV9 937 aaPredicted RBP12.02□□□□□ -0.49
TMEM253-204ENST00000554844 SIL1Q9H173 461 aa12.02□□□□□ -0.49
TMEM253-204ENST00000554844 TRIOBPQ9H2D6 2365 aa12.02□□□□□ -0.49
TMEM253-204ENST00000554844 FARP2O94887 1054 aaPredicted RBP12.01□□□□□ -0.49
TMEM253-204ENST00000554844 UBTFL1P0CB47 393 aaPredicted RBP12.01□□□□□ -0.49
TMEM253-204ENST00000554844 CAPN2P17655 700 aa12.01□□□□□ -0.49
TMEM253-204ENST00000554844 NFIAQ12857 509 aa12.01□□□□□ -0.49
TMEM253-204ENST00000554844 SCYL3Q8IZE3 742 aa12.01□□□□□ -0.49
TMEM253-204ENST00000554844 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
TMEM253-204ENST00000554844 USP44Q9H0E7 712 aa12.01□□□□□ -0.49
TMEM253-204ENST00000554844 TAOK2Q9UL54 1235 aa12.01□□□□□ -0.49
TMEM253-204ENST00000554844 ZHX2Q9Y6X8 837 aa12.01□□□□□ -0.49
TMEM253-204ENST00000554844 ADGRA2Q96PE1 1338 aa12.01□□□□□ -0.49
TMEM253-204ENST00000554844 BRCA2P51587 3418 aa12.01□□□□□ -0.49
TMEM253-204ENST00000554844 DOCK2Q92608 1830 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 E9PSI1 815 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 TNPO2O14787 897 aaKnown RBP12□□□□□ -0.49
TMEM253-204ENST00000554844 ADCY3O60266 1144 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 ENTPD3O75355 529 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 CIAO1O76071 339 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 CYP2C8P10632 490 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 CTGFP29279 349 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 RGS3P49796 1198 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 SPTY2D1Q68D10 685 aaPredicted RBP12□□□□□ -0.49
TMEM253-204ENST00000554844 U2AF1L4Q8WU68 220 aaKnown RBP12□□□□□ -0.49
TMEM253-204ENST00000554844 SMC4Q9NTJ3 1288 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 FAM198AQ9UFP1 575 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 PNMA3Q9UL41 463 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 SALL1Q9NSC2 1324 aa12□□□□□ -0.49
TMEM253-204ENST00000554844 A0A0G2JLL6 359 aaPredicted RBP11.99□□□□□ -0.49
TMEM253-204ENST00000554844 EVI5O60447 810 aa11.99□□□□□ -0.49
TMEM253-204ENST00000554844 TFRCP02786 760 aaKnown RBP11.99□□□□□ -0.49
TMEM253-204ENST00000554844 BCRP11274 1271 aa11.99□□□□□ -0.49
TMEM253-204ENST00000554844 IL15P40933 162 aaPredicted RBP11.99□□□□□ -0.49
TMEM253-204ENST00000554844 RFX5P48382 616 aaPredicted RBP11.99□□□□□ -0.49
TMEM253-204ENST00000554844 PRRT2Q7Z6L0 340 aaPredicted RBP11.99□□□□□ -0.49
TMEM253-204ENST00000554844 SSH1Q8WYL5 1049 aa11.99□□□□□ -0.49
TMEM253-204ENST00000554844 COA7Q96BR5 231 aa11.99□□□□□ -0.49
TMEM253-204ENST00000554844 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
TMEM253-204ENST00000554844 ABCF2Q9UG63 623 aa11.99□□□□□ -0.49
TMEM253-204ENST00000554844 SLC45A1Q9Y2W3 748 aa11.99□□□□□ -0.49
TMEM253-204ENST00000554844 MGAMO43451 1857 aa11.99□□□□□ -0.49
TMEM253-204ENST00000554844 PTPRAP18433 802 aa11.98□□□□□ -0.49
TMEM253-204ENST00000554844 PICALMQ13492 652 aa11.98□□□□□ -0.49
TMEM253-204ENST00000554844 MOGSQ13724 837 aa11.98□□□□□ -0.49
TMEM253-204ENST00000554844 ALDH1L2Q3SY69 923 aa11.98□□□□□ -0.49
TMEM253-204ENST00000554844 GPAT2Q6NUI2 795 aa11.98□□□□□ -0.49
TMEM253-204ENST00000554844 ATG9AQ7Z3C6 839 aa11.98□□□□□ -0.49
TMEM253-204ENST00000554844 IDI2Q9BXS1 227 aa11.98□□□□□ -0.49
TMEM253-204ENST00000554844 UNC93B1Q9H1C4 597 aa11.98□□□□□ -0.49
TMEM253-204ENST00000554844 MYH2Q9UKX2 1941 aa11.98□□□□□ -0.49
TMEM253-204ENST00000554844 TRIM75PA6NK02 468 aa11.97□□□□□ -0.49
TMEM253-204ENST00000554844 CTNND1O60716 968 aaKnown RBP11.97□□□□□ -0.49
TMEM253-204ENST00000554844 SGPL1O95470 568 aa11.97□□□□□ -0.49
TMEM253-204ENST00000554844 INHAP05111 366 aa11.97□□□□□ -0.49
TMEM253-204ENST00000554844 PHKA1P46020 1223 aa11.97□□□□□ -0.49
TMEM253-204ENST00000554844 FLT3LGP49771 235 aa11.97□□□□□ -0.49
TMEM253-204ENST00000554844 PABPC4Q13310 644 aaKnown RBP eCLIP11.97□□□□□ -0.49
TMEM253-204ENST00000554844 PXYLP1Q8TE99 480 aa11.97□□□□□ -0.49
TMEM253-204ENST00000554844 GABRQQ9UN88 632 aa11.97□□□□□ -0.49
TMEM253-204ENST00000554844 AFG3L2Q9Y4W6 797 aa11.97□□□□□ -0.49
TMEM253-204ENST00000554844 DOCK1Q14185 1865 aa11.97□□□□□ -0.49
TMEM253-204ENST00000554844 GAKO14976 1311 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 ZBTB7BO15156 539 aaPredicted RBP11.96□□□□□ -0.49
TMEM253-204ENST00000554844 ELNP15502 786 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 BTDP43251 543 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 GSTO1P78417 241 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 IRF5Q13568 498 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 CCDC102BQ68D86 513 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 ERICH6Q7L0X2 663 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 ZFPM1Q8IX07 1006 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 DEFB118Q96PH6 123 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 API5Q9BZZ5 524 aaKnown RBP11.96□□□□□ -0.49
TMEM253-204ENST00000554844 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.96□□□□□ -0.49
TMEM253-204ENST00000554844 AGTPBP1Q9UPW5 1226 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 AKAP2Q9Y2D5 859 aa11.96□□□□□ -0.49
TMEM253-204ENST00000554844 MROH7-TTC4A0A0A0MT08 1334 aa11.95□□□□□ -0.5
TMEM253-204ENST00000554844 PDS5AQ29RF7 1337 aaKnown RBP11.95□□□□□ -0.5
TMEM253-204ENST00000554844 ZNF521Q96K83 1311 aa11.95□□□□□ -0.5
TMEM253-204ENST00000554844 A0A1W2PPC1 479 aa11.95□□□□□ -0.5
TMEM253-204ENST00000554844 ZNF316A6NFI3 1004 aaPredicted RBP11.95□□□□□ -0.5
TMEM253-204ENST00000554844 PHF20L1A8MW92 1017 aa11.95□□□□□ -0.5
TMEM253-204ENST00000554844 LDHCP07864 332 aa11.95□□□□□ -0.5
TMEM253-204ENST00000554844 MVPQ14764 893 aaKnown RBP11.95□□□□□ -0.5
TMEM253-204ENST00000554844 GORABQ5T7V8 394 aa11.95□□□□□ -0.5
TMEM253-204ENST00000554844 UBE2Q1Q7Z7E8 422 aa11.95□□□□□ -0.5
TMEM253-204ENST00000554844 ANKRD13CQ8N6S4 541 aa11.95□□□□□ -0.5
TMEM253-204ENST00000554844 NOL10Q9BSC4 688 aaKnown RBP11.95□□□□□ -0.5
TMEM253-204ENST00000554844 TBC1D2Q9BYX2 928 aa11.95□□□□□ -0.5
TMEM253-204ENST00000554844 ATRNL1Q5VV63 1379 aa11.94□□□□□ -0.5
TMEM253-204ENST00000554844 DDTLA6NHG4 134 aaPredicted RBP11.94□□□□□ -0.5
TMEM253-204ENST00000554844 MAP4K4O95819 1239 aaPredicted RBP11.94□□□□□ -0.5
TMEM253-204ENST00000554844 GCLCP48506 637 aaPredicted RBP11.94□□□□□ -0.5
TMEM253-204ENST00000554844 RASGRF1Q13972 1273 aa11.94□□□□□ -0.5
TMEM253-204ENST00000554844 FAM110CQ1W6H9 321 aa11.94□□□□□ -0.5
TMEM253-204ENST00000554844 NECAB2Q7Z6G3 386 aa11.94□□□□□ -0.5
TMEM253-204ENST00000554844 IFNLR1Q8IU57 520 aaPredicted RBP11.94□□□□□ -0.5
TMEM253-204ENST00000554844 PROCA1Q8NCQ7 364 aaPredicted RBP11.94□□□□□ -0.5
TMEM253-204ENST00000554844 OSBPL5Q9H0X9 879 aaPredicted RBP11.94□□□□□ -0.5
TMEM253-204ENST00000554844 AS3MTQ9HBK9 375 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms