RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 GRM8O00222 908 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 FARP2O94887 1054 aaPredicted RBP13.28□□□□□ -0.28
SRP54-205ENST00000554803 PCCAP05165 728 aaPredicted RBP13.28□□□□□ -0.28
SRP54-205ENST00000554803 UBTFL1P0CB47 393 aaPredicted RBP13.28□□□□□ -0.28
SRP54-205ENST00000554803 CCL5P13501 91 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 GRK4P32298 578 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 CASP7P55210 303 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 GTF2IP78347 998 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 Q7L0L9 218 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 ZSCAN30Q86W11 494 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 SUCLG2Q96I99 432 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 BSDC1Q9NW68 430 aaPredicted RBP13.28□□□□□ -0.28
SRP54-205ENST00000554803 MTMR10Q9NXD2 777 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 C9orf78Q9NZ63 289 aaPredicted RBP13.28□□□□□ -0.28
SRP54-205ENST00000554803 LRRFIP2Q9Y608 721 aaKnown RBP13.28□□□□□ -0.28
SRP54-205ENST00000554803 SALL3Q9BXA9 1300 aa13.28□□□□□ -0.28
SRP54-205ENST00000554803 CLRN2A0PK11 232 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 MYO1BO43795 1136 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 EVI5O60447 810 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 CD2BP2O95400 341 aaKnown RBP13.27□□□□□ -0.29
SRP54-205ENST00000554803 BMP8BP34820 402 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 CUL4AQ13619 759 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 HSP90AB4PQ58FF6 505 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 UBE3BQ7Z3V4 1068 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 KAZALD1Q96I82 304 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 CDC5LQ99459 802 aaKnown RBP13.27□□□□□ -0.29
SRP54-205ENST00000554803 ZCCHC17Q9NP64 241 aaKnown RBP13.27□□□□□ -0.29
SRP54-205ENST00000554803 SRRDQ9UH36 339 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 LEMD3Q9Y2U8 911 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 PCDHAC2Q9Y5I4 1007 aa13.27□□□□□ -0.29
SRP54-205ENST00000554803 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 H7C1W4 665 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 RRP9O43818 475 aaKnown RBP13.26□□□□□ -0.29
SRP54-205ENST00000554803 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 ATP8B2P98198 1209 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 RASA3Q14644 834 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 CFAP100Q494V2 611 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.26□□□□□ -0.29
SRP54-205ENST00000554803 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.26□□□□□ -0.29
SRP54-205ENST00000554803 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.26□□□□□ -0.29
SRP54-205ENST00000554803 DOCK3Q8IZD9 2030 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 PANK2Q9BZ23 570 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 RNF208Q9H0X6 261 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 VEZTQ9HBM0 779 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 LMBRD1Q9NUN5 540 aa13.26□□□□□ -0.29
SRP54-205ENST00000554803 CTGFP29279 349 aa13.25□□□□□ -0.29
SRP54-205ENST00000554803 LRIT3Q3SXY7 679 aa13.25□□□□□ -0.29
SRP54-205ENST00000554803 EPHA10Q5JZY3 1008 aa13.25□□□□□ -0.29
SRP54-205ENST00000554803 CERS5Q8N5B7 392 aa13.25□□□□□ -0.29
SRP54-205ENST00000554803 FAM184AQ8NB25 1140 aa13.25□□□□□ -0.29
SRP54-205ENST00000554803 RAET1EQ8TD07 263 aa13.25□□□□□ -0.29
SRP54-205ENST00000554803 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
SRP54-205ENST00000554803 PRMT6Q96LA8 375 aaPredicted RBP13.25□□□□□ -0.29
SRP54-205ENST00000554803 GDF15Q99988 308 aa13.25□□□□□ -0.29
SRP54-205ENST00000554803 RIPOR2Q9Y4F9 1068 aa13.25□□□□□ -0.29
SRP54-205ENST00000554803 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
SRP54-205ENST00000554803 MX1P20591 662 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 OSBPP22059 807 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 KLRK1P26718 216 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 HOXD10P28358 340 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 UBXN2AP68543 259 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 VGLL4Q14135 290 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 C17orf99Q6UX52 265 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 HELBQ8NG08 1087 aaPredicted RBP13.24□□□□□ -0.29
SRP54-205ENST00000554803 PDLIM2Q96JY6 352 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 ESYT1Q9BSJ8 1104 aa13.24□□□□□ -0.29
SRP54-205ENST00000554803 PNMA6EA0A0J9YXQ4 647 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 BTBD19C9JJ37 291 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 SGPL1O95470 568 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 CETPP11597 493 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 CAPN2P17655 700 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 MSNP26038 577 aaKnown RBP13.23□□□□□ -0.29
SRP54-205ENST00000554803 PSMC4P43686 418 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 CTSWP56202 376 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 MCTP1Q6DN14 999 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.23□□□□□ -0.29
SRP54-205ENST00000554803 BICC1Q9H694 974 aaKnown RBP13.23□□□□□ -0.29
SRP54-205ENST00000554803 CD209Q9NNX6 404 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 PRDM6Q9NQX0 595 aa13.23□□□□□ -0.29
SRP54-205ENST00000554803 MYPNQ86TC9 1320 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 SPDYE5A6NIY4 337 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
SRP54-205ENST00000554803 NCLP19338 710 aaKnown RBP13.22□□□□□ -0.29
SRP54-205ENST00000554803 FOXO4P98177 505 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 TNFAIP1Q13829 316 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 ZSCAN23Q3MJ62 389 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 LRSAM1Q6UWE0 723 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 GAS2L3Q86XJ1 694 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 TTLL11Q8NHH1 800 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 UBE2Q2Q8WVN8 375 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 TEPSINQ96N21 525 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 NAP1L5Q96NT1 182 aaPredicted RBP13.22□□□□□ -0.29
SRP54-205ENST00000554803 BIN2Q9UBW5 565 aaPredicted RBP13.22□□□□□ -0.29
SRP54-205ENST00000554803 ATP6V1DQ9Y5K8 247 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 CSADQ9Y600 493 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms