RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 SPAG5Q96R06 1193 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 PSMD1Q99460 953 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 TCP11L1Q9NUJ3 509 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 SCOCQ9UIL1 159 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 NDC80O14777 642 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 LMNAP02545 664 aaKnown RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 PDE6BP35913 854 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 NOP2P46087 812 aaKnown RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 RNASELQ05823 741 aaKnown RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 SOGA3Q5TF21 947 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 ISM2Q6H9L7 571 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 RASEFQ8IZ41 740 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 C3orf20Q8ND61 904 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 GFM2Q969S9 779 aaKnown RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 HOOK2Q96ED9 719 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 ANKRD27Q96NW4 1050 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 CNNM2Q9H8M5 875 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 F6X3S4 739 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 MEFVO15553 781 aaPredicted RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 CEP104O60308 925 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 PPFIA2O75334 1257 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 IFIT1P09914 478 aaKnown RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 DESP17661 470 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 UBA7P41226 1012 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 IFT88Q13099 833 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 NMIQ13287 307 aaPredicted RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 RBM26Q5T8P6 1007 aaKnown RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 CAPRIN2Q6IMN6 1127 aaKnown RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 ARHGEF25Q86VW2 580 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 VSIG1Q86XK7 387 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.17□□□□□ -1.266e-6■■■■■ 28.1
PCNX1-207ENST00000554691 LTV1Q96GA3 475 aaPredicted RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 DDX27Q96GQ7 796 aaKnown RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 RAB17Q9H0T7 212 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 ABCB6Q9NP58 842 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 KLC4Q9NSK0 619 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 RTEL1Q9NZ71 1219 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 CTTNBP2NLQ9P2B4 639 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 ANKRD62A6NC57 917 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 ZBTB43O43298 467 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 SUN1O94901 812 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 POTEJP0CG39 1038 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 SKIP12755 728 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 HOXA7P31268 230 aaPredicted RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 TTF1Q15361 905 aaPredicted RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 MUM1Q2TAK8 710 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 FYB2Q5VWT5 728 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 C8orf58Q8NAV2 365 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 FBXO41Q8TF61 875 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 UBLCP1Q8WVY7 318 aaPredicted RBP7.17□□□□□ -1.26
PCNX1-207ENST00000554691 KCNF1Q9H3M0 494 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 TRIM35Q9UPQ4 493 aa7.17□□□□□ -1.26
PCNX1-207ENST00000554691 CCDC169A6NNP5 214 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 NOL3O60936 208 aaKnown RBP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 HMGB2P26583 209 aaKnown RBP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 RRS1Q15050 365 aaKnown RBP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 CCDC84Q86UT8 332 aaPredicted RBP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 CCDC65Q8IXS2 484 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 ZNF274Q96GC6 653 aaPredicted RBP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 CFAP57Q96MR6 1250 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 HELLSQ9NRZ9 838 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 EXOC1Q9NV70 894 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 KLHL14Q9P2G3 628 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 NSFL1CQ9UNZ2 370 aaKnown RBP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 UTP11Q9Y3A2 253 aaKnown RBP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 CCDC61Q9Y6R9 512 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 MSH6P52701 1360 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 PTCH1Q13635 1447 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 EIF4G3O43432 1585 aaKnown RBP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 ANO9A1A5B4 782 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 ATP2A1O14983 1001 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 TRIM66O15016 1216 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 SEMA3EO15041 775 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 FYB1O15117 783 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 PSMD7P51665 324 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 EIF3BP55884 814 aaKnown RBP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 ST5P78524 1137 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 ZBTB16Q05516 673 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 TMEM266Q2M3C6 531 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 ZFYVE27Q5T4F4 411 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 MAP3K21Q5TCX8 1036 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 TEX9Q8N6V9 391 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 RETREG2Q8NC44 543 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 DHX58Q96C10 678 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 CALML4Q96GE6 196 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 TUBB6Q9BUF5 446 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 PPP1R12CQ9BZL4 782 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 POLKQ9UBT6 870 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 MRFAP1Q9Y605 127 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 PFDN1O60925 122 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 RPS6KA5O75582 802 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 ATP5HO75947 161 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 SLC8A3P57103 927 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 BIRC3Q13489 604 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 ME3Q16798 604 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 KRT71Q3SY84 523 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 PARP9Q8IXQ6 854 aa7.16□□□□□ -1.26
PCNX1-207ENST00000554691 DDX54Q8TDD1 881 aaKnown RBP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.16□□□□□ -1.26
PCNX1-207ENST00000554691 CARD14Q9BXL6 1004 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms