RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 ZBTB38Q8NAP3 1195 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-230ENST00000554673 SIL1Q9H173 461 aa7.25□□□□□ -1.25
ATXN3-230ENST00000554673 OSBPL3Q9H4L5 887 aa7.25□□□□□ -1.25
ATXN3-230ENST00000554673 ALG2Q9H553 416 aa7.25□□□□□ -1.25
ATXN3-230ENST00000554673 C9orf78Q9NZ63 289 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-230ENST00000554673 NARFQ9UHQ1 456 aa7.25□□□□□ -1.25
ATXN3-230ENST00000554673 DBNLQ9UJU6 430 aaKnown RBP7.25□□□□□ -1.25
ATXN3-230ENST00000554673 SNED1Q8TER0 1413 aa7.25□□□□□ -1.25
ATXN3-230ENST00000554673 RBM47A0AV96 593 aaKnown RBP7.24□□□□□ -1.25
ATXN3-230ENST00000554673 FAM177BA6PVY3 158 aa7.24□□□□□ -1.25
ATXN3-230ENST00000554673 SOBPA7XYQ1 873 aa7.24□□□□□ -1.25
ATXN3-230ENST00000554673 SIAH2O43255 324 aa7.24□□□□□ -1.25
ATXN3-230ENST00000554673 SURF6O75683 361 aaKnown RBP7.24□□□□□ -1.25
ATXN3-230ENST00000554673 SDSP20132 328 aa7.24□□□□□ -1.25
ATXN3-230ENST00000554673 TFCP2Q12800 502 aa7.24□□□□□ -1.25
ATXN3-230ENST00000554673 SCARF1Q14162 830 aa7.24□□□□□ -1.25
ATXN3-230ENST00000554673 SUZ12Q15022 739 aaKnown RBP7.24□□□□□ -1.25
ATXN3-230ENST00000554673 PTCRAQ6ISU1 281 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-230ENST00000554673 UCN2Q96RP3 112 aa7.24□□□□□ -1.25
ATXN3-230ENST00000554673 NUDT12Q9BQG2 462 aa7.24□□□□□ -1.25
ATXN3-230ENST00000554673 RIPOR2Q9Y4F9 1068 aa7.24□□□□□ -1.25
ATXN3-230ENST00000554673 RTL9Q8NET4 1388 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 COL4A5P29400 1685 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 IRS4O14654 1257 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-230ENST00000554673 PLSCR1O15162 318 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 KLRK1P26718 216 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 CTSWP56202 376 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 CSPP1Q1MSJ5 1256 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 BMP2KLQ5H9B9 411 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 PRPF38BQ5VTL8 546 aaKnown RBP7.23□□□□□ -1.25
ATXN3-230ENST00000554673 TBC1D9Q6ZT07 1266 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 DBNDD2Q9BQY9 259 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 TRIM34Q9BYJ4 488 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 CCDC8Q9H0W5 538 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-230ENST00000554673 TLL2Q9Y6L7 1015 aa7.23□□□□□ -1.25
ATXN3-230ENST00000554673 FOXP2O15409 715 aa7.22□□□□□ -1.25
ATXN3-230ENST00000554673 HOXA2O43364 376 aa7.22□□□□□ -1.25
ATXN3-230ENST00000554673 MAP4K4O95819 1239 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-230ENST00000554673 FGFR2P21802 821 aa7.22□□□□□ -1.25
ATXN3-230ENST00000554673 SLC10A5Q5PT55 438 aa7.22□□□□□ -1.25
ATXN3-230ENST00000554673 PI16Q6UXB8 463 aa7.22□□□□□ -1.25
ATXN3-230ENST00000554673 KIF6Q6ZMV9 814 aa7.22□□□□□ -1.25
ATXN3-230ENST00000554673 BICDL1Q6ZP65 573 aa7.22□□□□□ -1.25
ATXN3-230ENST00000554673 CELF1Q92879 486 aaKnown RBP7.22□□□□□ -1.25
ATXN3-230ENST00000554673 NIP7Q9Y221 180 aaKnown RBP eCLIP7.22□□□□□ -1.25
ATXN3-230ENST00000554673 TAF6LQ9Y6J9 622 aa7.22□□□□□ -1.25
ATXN3-230ENST00000554673 PSME4Q14997 1843 aa7.22□□□□□ -1.25
ATXN3-230ENST00000554673 A0A0G2JLW4 131 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 EYA2O00167 538 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 POLRMTO00411 1230 aaKnown RBP7.21□□□□□ -1.26
ATXN3-230ENST00000554673 APBA3O96018 575 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 NDUFV2P19404 249 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 LMOD1P29536 600 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-230ENST00000554673 USP46P62068 366 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 SH3BP2P78314 561 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 NEXNQ0ZGT2 675 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 LINC01559Q495D7 138 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 TNNI3KQ59H18 835 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 PRR5LQ6MZQ0 368 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 OLFM4Q6UX06 510 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 HELBQ8NG08 1087 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-230ENST00000554673 PURBQ96QR8 312 aaKnown RBP7.21□□□□□ -1.26
ATXN3-230ENST00000554673 LRRCC1Q9C099 1032 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 BCL11AQ9H165 835 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 TRMT112Q9UI30 125 aaKnown RBP7.21□□□□□ -1.26
ATXN3-230ENST00000554673 FPGT-TNNI3KV9GXZ4 949 aa7.21□□□□□ -1.26
ATXN3-230ENST00000554673 MX1P20591 662 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 ITGA6P23229 1130 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 TIMM10P62072 90 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 VAC14Q08AM6 782 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 SF3B3Q15393 1217 aaKnown RBP7.2□□□□□ -1.26
ATXN3-230ENST00000554673 SLC27A3Q5K4L6 730 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 CLEC4GQ6UXB4 293 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 TXNRD3Q86VQ6 643 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 ZNF384Q8TF68 577 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 ANTXR1Q9H6X2 564 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 HMX1Q9NP08 348 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-230ENST00000554673 BAZ2AQ9UIF9 1905 aaKnown RBP7.2□□□□□ -1.26
ATXN3-230ENST00000554673 DDX60LQ5H9U9 1706 aaKnown RBP7.2□□□□□ -1.26
ATXN3-230ENST00000554673 SH3TC1Q8TE82 1336 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 MAST2Q6P0Q8 1798 aa7.2□□□□□ -1.26
ATXN3-230ENST00000554673 PDE8AO60658 829 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 RAB11FIP3O75154 756 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 CIAO1O76071 339 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 HMGB1P09429 215 aaKnown RBP7.19□□□□□ -1.26
ATXN3-230ENST00000554673 HSP90B1P14625 803 aaKnown RBP7.19□□□□□ -1.26
ATXN3-230ENST00000554673 CHMLP26374 656 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 MSL1Q68DK7 614 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 MRPL14Q6P1L8 145 aaKnown RBP7.19□□□□□ -1.26
ATXN3-230ENST00000554673 AACSQ86V21 672 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 KIF1BPQ96EK5 621 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 TBC1D32Q96NH3 1257 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 UTP14AQ9BVJ6 771 aaKnown RBP7.19□□□□□ -1.26
ATXN3-230ENST00000554673 TFIP11Q9UBB9 837 aaKnown RBP7.19□□□□□ -1.26
ATXN3-230ENST00000554673 PALD1Q9ULE6 856 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 RTCBQ9Y3I0 505 aaKnown RBP7.19□□□□□ -1.26
ATXN3-230ENST00000554673 MAFBQ9Y5Q3 323 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-230ENST00000554673 FOCADQ5VW36 1801 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 ECM29Q5VYK3 1845 aa7.19□□□□□ -1.26
ATXN3-230ENST00000554673 SIPA1L1O43166 1804 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms