RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 FASTKD5Q7L8L6 764 aaKnown RBP27.52■■■□□ 2
GABRB3-206ENST00000554556 NEUROD6Q96NK8 337 aa27.52■■■□□ 2
GABRB3-206ENST00000554556 SRRDQ9UH36 339 aa27.52■■■□□ 2
GABRB3-206ENST00000554556 MYCP01106 439 aaPredicted RBP27.51■■□□□ 1.99
GABRB3-206ENST00000554556 BTDP43251 543 aa27.51■■□□□ 1.99
GABRB3-206ENST00000554556 MOGSQ13724 837 aa27.51■■□□□ 1.99
GABRB3-206ENST00000554556 ZHX2Q9Y6X8 837 aa27.51■■□□□ 1.99
GABRB3-206ENST00000554556 ADGRA2Q96PE1 1338 aa27.5■■□□□ 1.99
GABRB3-206ENST00000554556 ECM2O94769 699 aaPredicted RBP27.5■■□□□ 1.99
GABRB3-206ENST00000554556 MAP3K10Q02779 954 aa27.5■■□□□ 1.99
GABRB3-206ENST00000554556 GORABQ5T7V8 394 aa27.5■■□□□ 1.99
GABRB3-206ENST00000554556 ATRNL1Q5VV63 1379 aa27.49■■□□□ 1.99
GABRB3-206ENST00000554556 MROH7-TTC4A0A0A0MT08 1334 aa27.49■■□□□ 1.99
GABRB3-206ENST00000554556 LDHCP07864 332 aa27.49■■□□□ 1.99
GABRB3-206ENST00000554556 PTPRAP18433 802 aa27.49■■□□□ 1.99
GABRB3-206ENST00000554556 RAET1EQ8TD07 263 aa27.49■■□□□ 1.99
GABRB3-206ENST00000554556 TRIM47Q96LD4 638 aa27.49■■□□□ 1.99
GABRB3-206ENST00000554556 CTNND1O60716 968 aaKnown RBP27.48■■□□□ 1.99
GABRB3-206ENST00000554556 GNAI2P04899 355 aa27.48■■□□□ 1.99
GABRB3-206ENST00000554556 OSBPP22059 807 aa27.48■■□□□ 1.99
GABRB3-206ENST00000554556 GSTO1P78417 241 aa27.48■■□□□ 1.99
GABRB3-206ENST00000554556 PICALMQ13492 652 aa27.48■■□□□ 1.99
GABRB3-206ENST00000554556 GPAT2Q6NUI2 795 aa27.48■■□□□ 1.99
GABRB3-206ENST00000554556 SH3BP5LQ7L8J4 393 aa27.48■■□□□ 1.99
GABRB3-206ENST00000554556 RFX7Q2KHR2 1363 aa27.48■■□□□ 1.99
GABRB3-206ENST00000554556 GPR75-ASB3A0A0A6YYF3 556 aa27.47■■□□□ 1.99
GABRB3-206ENST00000554556 A0A0G2JLL6 359 aaPredicted RBP27.47■■□□□ 1.99
GABRB3-206ENST00000554556 DDTLA6NHG4 134 aaPredicted RBP27.47■■□□□ 1.99
GABRB3-206ENST00000554556 MAP4K4O95819 1239 aaPredicted RBP27.47■■□□□ 1.99
GABRB3-206ENST00000554556 CTGFP29279 349 aa27.47■■□□□ 1.99
GABRB3-206ENST00000554556 MECOMQ03112 1051 aa27.47■■□□□ 1.99
GABRB3-206ENST00000554556 G3BP1Q13283 466 aaKnown RBP eCLIP27.47■■□□□ 1.99
GABRB3-206ENST00000554556 PRRT2Q7Z6L0 340 aaPredicted RBP27.47■■□□□ 1.99
GABRB3-206ENST00000554556 AFG3L2Q9Y4W6 797 aa27.47■■□□□ 1.99
GABRB3-206ENST00000554556 MYPNQ86TC9 1320 aa27.46■■□□□ 1.99
GABRB3-206ENST00000554556 GRK4P32298 578 aa27.46■■□□□ 1.99
GABRB3-206ENST00000554556 FCGRTP55899 365 aa27.46■■□□□ 1.99
GABRB3-206ENST00000554556 HABP4Q5JVS0 413 aaKnown RBP27.46■■□□□ 1.99
GABRB3-206ENST00000554556 GADL1Q6ZQY3 521 aa27.46■■□□□ 1.99
GABRB3-206ENST00000554556 DDX4Q9NQI0 724 aaKnown RBP27.46■■□□□ 1.99
GABRB3-206ENST00000554556 SLC45A1Q9Y2W3 748 aa27.46■■□□□ 1.99
GABRB3-206ENST00000554556 NPM3O75607 178 aaKnown RBP27.45■■□□□ 1.98
GABRB3-206ENST00000554556 CYP2C8P10632 490 aa27.45■■□□□ 1.98
GABRB3-206ENST00000554556 BCRP11274 1271 aa27.45■■□□□ 1.98
GABRB3-206ENST00000554556 ATF7IPQ6VMQ6 1270 aa27.45■■□□□ 1.98
GABRB3-206ENST00000554556 SPATA5Q8NB90 893 aa27.45■■□□□ 1.98
GABRB3-206ENST00000554556 FRAT1Q92837 279 aaPredicted RBP27.45■■□□□ 1.98
GABRB3-206ENST00000554556 HMG20BQ9P0W2 317 aa27.45■■□□□ 1.98
GABRB3-206ENST00000554556 MGAMO43451 1857 aa27.44■■□□□ 1.98
GABRB3-206ENST00000554556 TBC1D12O60347 775 aa27.44■■□□□ 1.98
GABRB3-206ENST00000554556 TRIM27P14373 513 aa27.44■■□□□ 1.98
GABRB3-206ENST00000554556 NKX2-3Q8TAU0 364 aa27.44■■□□□ 1.98
GABRB3-206ENST00000554556 DOCK1Q14185 1865 aa27.44■■□□□ 1.98
GABRB3-206ENST00000554556 CENPFP49454 3210 aa27.43■■□□□ 1.98
GABRB3-206ENST00000554556 RHBDL3P58872 404 aa27.43■■□□□ 1.98
GABRB3-206ENST00000554556 BIN2Q9UBW5 565 aaPredicted RBP27.43■■□□□ 1.98
GABRB3-206ENST00000554556 UQCRFS1P1P0C7P4 283 aa27.42■■□□□ 1.98
GABRB3-206ENST00000554556 UBXN2AP68543 259 aa27.42■■□□□ 1.98
GABRB3-206ENST00000554556 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.42■■□□□ 1.98
GABRB3-206ENST00000554556 RAI14Q9P0K7 980 aa27.42■■□□□ 1.98
GABRB3-206ENST00000554556 PTPRFP10586 1907 aa27.41■■□□□ 1.98
GABRB3-206ENST00000554556 ARID4AP29374 1257 aaPredicted RBP27.41■■□□□ 1.98
GABRB3-206ENST00000554556 MTFR1Q15390 333 aa27.41■■□□□ 1.98
GABRB3-206ENST00000554556 NSUN4Q96CB9 384 aaKnown RBP27.41■■□□□ 1.98
GABRB3-206ENST00000554556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.41■■□□□ 1.98
GABRB3-206ENST00000554556 PHIPQ8WWQ0 1821 aa27.4■■□□□ 1.98
GABRB3-206ENST00000554556 BCAR3O75815 825 aa27.4■■□□□ 1.98
GABRB3-206ENST00000554556 TBC1D9Q6ZT07 1266 aa27.4■■□□□ 1.98
GABRB3-206ENST00000554556 SMCR8Q8TEV9 937 aaPredicted RBP27.4■■□□□ 1.98
GABRB3-206ENST00000554556 CLUAP1Q96AJ1 413 aa27.4■■□□□ 1.98
GABRB3-206ENST00000554556 NOL10Q9BSC4 688 aaKnown RBP27.4■■□□□ 1.98
GABRB3-206ENST00000554556 OSBPL5Q9H0X9 879 aaPredicted RBP27.4■■□□□ 1.98
GABRB3-206ENST00000554556 LRP2BPQ9P2M1 347 aa27.4■■□□□ 1.98
GABRB3-206ENST00000554556 PNMA6EA0A0J9YXQ4 647 aa27.39■■□□□ 1.98
GABRB3-206ENST00000554556 TRIM75PA6NK02 468 aa27.39■■□□□ 1.98
GABRB3-206ENST00000554556 PRKCZQ05513 592 aa27.39■■□□□ 1.98
GABRB3-206ENST00000554556 SLAIN1Q8ND83 568 aa27.39■■□□□ 1.98
GABRB3-206ENST00000554556 ZNF384Q8TF68 577 aa27.39■■□□□ 1.98
GABRB3-206ENST00000554556 SLURP2P0DP57 97 aa27.38■■□□□ 1.97
GABRB3-206ENST00000554556 PI16Q6UXB8 463 aa27.38■■□□□ 1.97
GABRB3-206ENST00000554556 TBC1D2Q9BYX2 928 aa27.38■■□□□ 1.97
GABRB3-206ENST00000554556 PNMA3Q9UL41 463 aa27.38■■□□□ 1.97
GABRB3-206ENST00000554556 AGTPBP1Q9UPW5 1226 aa27.38■■□□□ 1.97
GABRB3-206ENST00000554556 GJB1P08034 283 aa27.37■■□□□ 1.97
GABRB3-206ENST00000554556 CCL5P13501 91 aa27.37■■□□□ 1.97
GABRB3-206ENST00000554556 RNF208Q9H0X6 261 aa27.37■■□□□ 1.97
GABRB3-206ENST00000554556 TNNQ9UQP3 1299 aa27.37■■□□□ 1.97
GABRB3-206ENST00000554556 MCAMP43121 646 aa27.36■■□□□ 1.97
GABRB3-206ENST00000554556 GJA8P48165 433 aa27.36■■□□□ 1.97
GABRB3-206ENST00000554556 ZKSCAN2Q63HK3 967 aa27.36■■□□□ 1.97
GABRB3-206ENST00000554556 GPR108Q9NPR9 543 aa27.36■■□□□ 1.97
GABRB3-206ENST00000554556 GABRQQ9UN88 632 aa27.36■■□□□ 1.97
GABRB3-206ENST00000554556 COL2A1P02458 1487 aaPredicted RBP27.36■■□□□ 1.97
GABRB3-206ENST00000554556 MKI67P46013 3256 aaKnown RBP27.36■■□□□ 1.97
GABRB3-206ENST00000554556 CCDC158Q5M9N0 1113 aa27.35■■□□□ 1.97
GABRB3-206ENST00000554556 TEX11Q8IYF3 940 aa27.35■■□□□ 1.97
GABRB3-206ENST00000554556 PROCA1Q8NCQ7 364 aaPredicted RBP27.35■■□□□ 1.97
GABRB3-206ENST00000554556 FAM196BA6NMK8 535 aa27.34■■□□□ 1.97
GABRB3-206ENST00000554556 TNPO2O14787 897 aaKnown RBP27.34■■□□□ 1.97
GABRB3-206ENST00000554556 BAG3O95817 575 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms