RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 SLF2Q8IX21 1173 aa10.16□□□□□ -0.78
ACTN1-212ENST00000554158 ZGPATQ8N5A5 531 aaKnown RBP10.16□□□□□ -0.78
ACTN1-212ENST00000554158 LPIN2Q92539 896 aa10.16□□□□□ -0.78
ACTN1-212ENST00000554158 USP40Q9NVE5 1235 aa10.16□□□□□ -0.78
ACTN1-212ENST00000554158 HDAC5Q9UQL6 1122 aa10.16□□□□□ -0.78
ACTN1-212ENST00000554158 UTYO14607 1347 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 CXCL11O14625 94 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 TNPO2O14787 897 aaKnown RBP10.15□□□□□ -0.78
ACTN1-212ENST00000554158 ADCY3O60266 1144 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 PRKCZQ05513 592 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 NOL9Q5SY16 702 aaKnown RBP10.15□□□□□ -0.78
ACTN1-212ENST00000554158 CDC42EP5Q6NZY7 148 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 DZIP1Q86YF9 867 aaKnown RBP10.15□□□□□ -0.78
ACTN1-212ENST00000554158 FAM9BQ8IZU0 186 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 KLHDC4Q8TBB5 520 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 COA7Q96BR5 231 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.78
ACTN1-212ENST00000554158 DENND2AQ9ULE3 1009 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 KCNH4Q9UQ05 1017 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 DAGLAQ9Y4D2 1042 aa10.15□□□□□ -0.78
ACTN1-212ENST00000554158 EYA2O00167 538 aa10.14□□□□□ -0.79
ACTN1-212ENST00000554158 ATP2B3Q16720 1220 aa10.14□□□□□ -0.79
ACTN1-212ENST00000554158 SCYL3Q8IZE3 742 aa10.14□□□□□ -0.79
ACTN1-212ENST00000554158 VGLL2Q8N8G2 317 aa10.14□□□□□ -0.79
ACTN1-212ENST00000554158 U2AF1L4Q8WU68 220 aaKnown RBP10.14□□□□□ -0.79
ACTN1-212ENST00000554158 KAZALD1Q96I82 304 aa10.14□□□□□ -0.79
ACTN1-212ENST00000554158 CEP126Q9P2H0 1117 aa10.14□□□□□ -0.79
ACTN1-212ENST00000554158 ZNF112Q9UJU3 913 aa10.14□□□□□ -0.79
ACTN1-212ENST00000554158 PNMA3Q9UL41 463 aa10.14□□□□□ -0.79
ACTN1-212ENST00000554158 ZHX2Q9Y6X8 837 aa10.14□□□□□ -0.79
ACTN1-212ENST00000554158 PHIPQ8WWQ0 1821 aa10.14□□□□□ -0.79
ACTN1-212ENST00000554158 SEMA3EO15041 775 aa10.13□□□□□ -0.79
ACTN1-212ENST00000554158 SGPL1O95470 568 aa10.13□□□□□ -0.79
ACTN1-212ENST00000554158 CYP2C8P10632 490 aa10.13□□□□□ -0.79
ACTN1-212ENST00000554158 DIXDC1Q155Q3 683 aa10.13□□□□□ -0.79
ACTN1-212ENST00000554158 SPTY2D1Q68D10 685 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-212ENST00000554158 ANKRD44Q8N8A2 993 aa10.13□□□□□ -0.79
ACTN1-212ENST00000554158 SLC17A8Q8NDX2 589 aa10.13□□□□□ -0.79
ACTN1-212ENST00000554158 SHISA4Q96DD7 197 aa10.13□□□□□ -0.79
ACTN1-212ENST00000554158 SIL1Q9H173 461 aa10.13□□□□□ -0.79
ACTN1-212ENST00000554158 ALPK3Q96L96 1907 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 A0A1W2PPC1 479 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 ENTPD3O75355 529 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 INHAP05111 366 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 UBTFL1P0CB47 393 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-212ENST00000554158 FGFR2P21802 821 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 PRDX5P30044 214 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 FLT3LGP49771 235 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 RGS3P49796 1198 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 PABPC4Q13310 644 aaKnown RBP eCLIP10.12□□□□□ -0.79
ACTN1-212ENST00000554158 UNC93B1Q9H1C4 597 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 ABCF2Q9UG63 623 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 SLC45A1Q9Y2W3 748 aa10.12□□□□□ -0.79
ACTN1-212ENST00000554158 ADGRA2Q96PE1 1338 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 A0A0G2JLL6 359 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-212ENST00000554158 TRIM75PA6NK02 468 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 RIOK3O14730 519 aaKnown RBP10.11□□□□□ -0.79
ACTN1-212ENST00000554158 ZBTB7BO15156 539 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-212ENST00000554158 CTNND1O60716 968 aaKnown RBP10.11□□□□□ -0.79
ACTN1-212ENST00000554158 BCRP11274 1271 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 ELNP15502 786 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 PTPRAP18433 802 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 CTGFP29279 349 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 NFIAQ12857 509 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 PICALMQ13492 652 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 NECAB2Q7Z6G3 386 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 PRRT2Q7Z6L0 340 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-212ENST00000554158 MRPL50Q8N5N7 158 aaKnown RBP10.11□□□□□ -0.79
ACTN1-212ENST00000554158 PXYLP1Q8TE99 480 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 DEFB118Q96PH6 123 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 GABRQQ9UN88 632 aa10.11□□□□□ -0.79
ACTN1-212ENST00000554158 SALL1Q9NSC2 1324 aa10.1□□□□□ -0.79
ACTN1-212ENST00000554158 CIAO1O76071 339 aa10.1□□□□□ -0.79
ACTN1-212ENST00000554158 IL15P40933 162 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-212ENST00000554158 IRF5Q13568 498 aa10.1□□□□□ -0.79
ACTN1-212ENST00000554158 ANKRD13CQ8N6S4 541 aa10.1□□□□□ -0.79
ACTN1-212ENST00000554158 NOL10Q9BSC4 688 aaKnown RBP10.1□□□□□ -0.79
ACTN1-212ENST00000554158 USP44Q9H0E7 712 aa10.1□□□□□ -0.79
ACTN1-212ENST00000554158 FAM198AQ9UFP1 575 aa10.1□□□□□ -0.79
ACTN1-212ENST00000554158 LOC285556D6RIA3 1793 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 DLL1O00548 723 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 GCLCP48506 637 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-212ENST00000554158 GSTO1P78417 241 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 GORABQ5T7V8 394 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 GPAT2Q6NUI2 795 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 ERICH6Q7L0X2 663 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 CCAR1Q8IX12 1150 aaKnown RBP10.09□□□□□ -0.79
ACTN1-212ENST00000554158 RNF25Q96BH1 459 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-212ENST00000554158 IDI2Q9BXS1 227 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 TRIM34Q9BYJ4 488 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 TBC1D2Q9BYX2 928 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.09□□□□□ -0.79
ACTN1-212ENST00000554158 SMC4Q9NTJ3 1288 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
ACTN1-212ENST00000554158 AGTPBP1Q9UPW5 1226 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 AKAP2Q9Y2D5 859 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 AFG3L2Q9Y4W6 797 aa10.09□□□□□ -0.79
ACTN1-212ENST00000554158 DDX60LQ5H9U9 1706 aaKnown RBP10.09□□□□□ -0.79
ACTN1-212ENST00000554158 PHF20L1A8MW92 1017 aa10.08□□□□□ -0.8
ACTN1-212ENST00000554158 E9PSI1 815 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms