RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 MAP2K1Q02750 393 aaPredicted RBP28.22■■■□□ 2.11
NEK9-203ENST00000553945 DCAF15Q66K64 600 aa28.22■■■□□ 2.11
NEK9-203ENST00000553945 MIGA2Q7L4E1 593 aa28.22■■■□□ 2.11
NEK9-203ENST00000553945 ANKRD13AQ8IZ07 590 aa28.22■■■□□ 2.11
NEK9-203ENST00000553945 MIGA1Q8NAN2 632 aa28.22■■■□□ 2.11
NEK9-203ENST00000553945 OTOFQ9HC10 1997 aa28.22■■■□□ 2.11
NEK9-203ENST00000553945 KIF23Q02241 960 aaPredicted RBP28.21■■■□□ 2.11
NEK9-203ENST00000553945 B4GALNT3Q6L9W6 998 aa28.21■■■□□ 2.11
NEK9-203ENST00000553945 SMC5Q8IY18 1101 aa28.21■■■□□ 2.11
NEK9-203ENST00000553945 CSRNP1Q96S65 589 aa28.21■■■□□ 2.11
NEK9-203ENST00000553945 TTC41PQ6P2S7 1318 aa28.2■■■□□ 2.11
NEK9-203ENST00000553945 UNCXA6NJT0 531 aa28.2■■■□□ 2.1
NEK9-203ENST00000553945 NPM3O75607 178 aaKnown RBP28.2■■■□□ 2.1
NEK9-203ENST00000553945 MKRN3Q13064 507 aaKnown RBP28.2■■■□□ 2.1
NEK9-203ENST00000553945 SH3BP5LQ7L8J4 393 aa28.2■■■□□ 2.1
NEK9-203ENST00000553945 ZNF341Q9BYN7 854 aa28.2■■■□□ 2.1
NEK9-203ENST00000553945 ZNF532Q9HCE3 1301 aa28.19■■■□□ 2.1
NEK9-203ENST00000553945 DDTLA6NHG4 134 aaPredicted RBP28.19■■■□□ 2.1
NEK9-203ENST00000553945 MX1P20591 662 aa28.19■■■□□ 2.1
NEK9-203ENST00000553945 MAP3K9P80192 1104 aa28.19■■■□□ 2.1
NEK9-203ENST00000553945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.19■■■□□ 2.1
NEK9-203ENST00000553945 TGFBRAP1Q8WUH2 860 aa28.19■■■□□ 2.1
NEK9-203ENST00000553945 AIDAQ96BJ3 306 aa28.19■■■□□ 2.1
NEK9-203ENST00000553945 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.19■■■□□ 2.1
NEK9-203ENST00000553945 WBP1LQ9NX94 342 aa28.19■■■□□ 2.1
NEK9-203ENST00000553945 CDK5RAP2Q96SN8 1893 aa28.19■■■□□ 2.1
NEK9-203ENST00000553945 ERC2O15083 957 aa28.18■■■□□ 2.1
NEK9-203ENST00000553945 WRNIP1Q96S55 665 aa28.18■■■□□ 2.1
NEK9-203ENST00000553945 LNPKQ9C0E8 428 aa28.18■■■□□ 2.1
NEK9-203ENST00000553945 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.17■■■□□ 2.1
NEK9-203ENST00000553945 CERS3Q8IU89 383 aa28.17■■■□□ 2.1
NEK9-203ENST00000553945 MAPKAPK5Q8IW41 473 aa28.17■■■□□ 2.1
NEK9-203ENST00000553945 BEGAINQ9BUH8 593 aa28.17■■■□□ 2.1
NEK9-203ENST00000553945 OSBPL5Q9H0X9 879 aaPredicted RBP28.17■■■□□ 2.1
NEK9-203ENST00000553945 ELP3Q9H9T3 547 aa28.17■■■□□ 2.1
NEK9-203ENST00000553945 CSADQ9Y600 493 aa28.17■■■□□ 2.1
NEK9-203ENST00000553945 MYH7P12883 1935 aa28.16■■■□□ 2.1
NEK9-203ENST00000553945 FOCADQ5VW36 1801 aa28.16■■■□□ 2.1
NEK9-203ENST00000553945 MAGEB6P1A0A0J9YX57 407 aa28.16■■■□□ 2.1
NEK9-203ENST00000553945 TCRBV5S4A2TA0A5A2 114 aa28.16■■■□□ 2.1
NEK9-203ENST00000553945 VGLL4Q14135 290 aa28.16■■■□□ 2.1
NEK9-203ENST00000553945 PI4K2BQ8TCG2 481 aa28.16■■■□□ 2.1
NEK9-203ENST00000553945 SALL3Q9BXA9 1300 aa28.16■■■□□ 2.1
NEK9-203ENST00000553945 ATRNL1Q5VV63 1379 aa28.15■■■□□ 2.1
NEK9-203ENST00000553945 GLRX3O76003 335 aaKnown RBP28.15■■■□□ 2.1
NEK9-203ENST00000553945 ADD2P35612 726 aa28.15■■■□□ 2.1
NEK9-203ENST00000553945 SPRYD7Q5W111 196 aa28.15■■■□□ 2.1
NEK9-203ENST00000553945 WNK4Q96J92 1243 aa28.15■■■□□ 2.1
NEK9-203ENST00000553945 USP5P45974 858 aa28.14■■■□□ 2.1
NEK9-203ENST00000553945 SLFNL1Q499Z3 407 aa28.14■■■□□ 2.1
NEK9-203ENST00000553945 ZSCAN25Q6NSZ9 544 aa28.14■■■□□ 2.1
NEK9-203ENST00000553945 ZKSCAN4Q969J2 545 aaPredicted RBP28.14■■■□□ 2.1
NEK9-203ENST00000553945 FLT1P17948 1338 aa28.14■■■□□ 2.09
NEK9-203ENST00000553945 COL2A1P02458 1487 aaPredicted RBP28.14■■■□□ 2.09
NEK9-203ENST00000553945 FOXN1O15353 648 aa28.13■■■□□ 2.09
NEK9-203ENST00000553945 NUCB1Q02818 461 aa28.13■■■□□ 2.09
NEK9-203ENST00000553945 CHD1LQ86WJ1 897 aa28.13■■■□□ 2.09
NEK9-203ENST00000553945 RIOK1Q9BRS2 568 aaKnown RBP28.13■■■□□ 2.09
NEK9-203ENST00000553945 SLURP2P0DP57 97 aa28.12■■■□□ 2.09
NEK9-203ENST00000553945 KBTBD3Q8NAB2 608 aa28.12■■■□□ 2.09
NEK9-203ENST00000553945 OPTNQ96CV9 577 aa28.12■■■□□ 2.09
NEK9-203ENST00000553945 SAP30BPQ9UHR5 308 aaKnown RBP28.12■■■□□ 2.09
NEK9-203ENST00000553945 ZNF112Q9UJU3 913 aa28.12■■■□□ 2.09
NEK9-203ENST00000553945 CHGBP05060 677 aa28.11■■■□□ 2.09
NEK9-203ENST00000553945 ZBTB48P10074 688 aaPredicted RBP28.11■■■□□ 2.09
NEK9-203ENST00000553945 INPP5BP32019 993 aa28.11■■■□□ 2.09
NEK9-203ENST00000553945 REM2Q8IYK8 340 aaPredicted RBP28.11■■■□□ 2.09
NEK9-203ENST00000553945 STAP2Q9UGK3 403 aa28.11■■■□□ 2.09
NEK9-203ENST00000553945 SNCAIPQ9Y6H5 919 aa28.11■■■□□ 2.09
NEK9-203ENST00000553945 GJA5P36382 358 aa28.1■■■□□ 2.09
NEK9-203ENST00000553945 PDE1AP54750 535 aa28.1■■■□□ 2.09
NEK9-203ENST00000553945 UBE3CQ15386 1083 aa28.1■■■□□ 2.09
NEK9-203ENST00000553945 CNKSR2Q8WXI2 1034 aa28.1■■■□□ 2.09
NEK9-203ENST00000553945 DHX36Q9H2U1 1008 aaKnown RBP28.1■■■□□ 2.09
NEK9-203ENST00000553945 MAP3K10Q02779 954 aa28.09■■■□□ 2.09
NEK9-203ENST00000553945 LCORLQ8N3X6 602 aa28.09■■■□□ 2.09
NEK9-203ENST00000553945 CRNKL1Q9BZJ0 848 aaKnown RBP28.09■■■□□ 2.09
NEK9-203ENST00000553945 ARMT1Q9H993 441 aa28.09■■■□□ 2.09
NEK9-203ENST00000553945 FAM196BA6NMK8 535 aa28.08■■■□□ 2.09
NEK9-203ENST00000553945 MBD4O95243 580 aa28.08■■■□□ 2.09
NEK9-203ENST00000553945 CTCFP49711 727 aaPredicted RBP28.08■■■□□ 2.09
NEK9-203ENST00000553945 OTUD5Q96G74 571 aa28.08■■■□□ 2.09
NEK9-203ENST00000553945 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.08■■■□□ 2.09
NEK9-203ENST00000553945 PI4KBQ9UBF8 816 aa28.08■■■□□ 2.09
NEK9-203ENST00000553945 PALD1Q9ULE6 856 aa28.08■■■□□ 2.09
NEK9-203ENST00000553945 PHF20L1A8MW92 1017 aa28.07■■■□□ 2.08
NEK9-203ENST00000553945 TBC1D12O60347 775 aa28.07■■■□□ 2.08
NEK9-203ENST00000553945 SREBF2Q12772 1141 aa28.07■■■□□ 2.08
NEK9-203ENST00000553945 SLC4A8Q2Y0W8 1093 aa28.07■■■□□ 2.08
NEK9-203ENST00000553945 MYH1P12882 1939 aa28.07■■■□□ 2.08
NEK9-203ENST00000553945 MANSC4A6NHS7 340 aaPredicted RBP28.06■■■□□ 2.08
NEK9-203ENST00000553945 SPDYE5A6NIY4 337 aa28.06■■■□□ 2.08
NEK9-203ENST00000553945 CA12O43570 354 aa28.06■■■□□ 2.08
NEK9-203ENST00000553945 ERO1BQ86YB8 467 aa28.06■■■□□ 2.08
NEK9-203ENST00000553945 TSKSQ9UJT2 592 aa28.06■■■□□ 2.08
NEK9-203ENST00000553945 RNF113AO15541 343 aaKnown RBP28.05■■■□□ 2.08
NEK9-203ENST00000553945 SIPA1L1O43166 1804 aa28.05■■■□□ 2.08
NEK9-203ENST00000553945 TM4SF4P48230 202 aa28.05■■■□□ 2.08
NEK9-203ENST00000553945 NOL9Q5SY16 702 aaKnown RBP28.05■■■□□ 2.08
NEK9-203ENST00000553945 NAV1Q8NEY1 1877 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms