RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 SMCR8Q8TEV9 937 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-210ENST00000553779 MEIS3Q99687 375 aa12.24□□□□□ -0.45
ACTN1-210ENST00000553779 FAM198AQ9UFP1 575 aa12.24□□□□□ -0.45
ACTN1-210ENST00000553779 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
ACTN1-210ENST00000553779 FOCADQ5VW36 1801 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 A0A1B0GUL7 405 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 IPO8O15397 1037 aaKnown RBP12.23□□□□□ -0.45
ACTN1-210ENST00000553779 ENTPD3O75355 529 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 UBXN2AP68543 259 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 GSTO1P78417 241 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 OS9Q13438 667 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-210ENST00000553779 RASGRF1Q13972 1273 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 FASTKD5Q7L8L6 764 aaKnown RBP12.23□□□□□ -0.45
ACTN1-210ENST00000553779 SCYL3Q8IZE3 742 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 FRAT1Q92837 279 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-210ENST00000553779 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 COPRSQ9NQ92 184 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 SRRDQ9UH36 339 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 KCNH4Q9UQ05 1017 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 ZHX2Q9Y6X8 837 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 LOC285556D6RIA3 1793 aa12.23□□□□□ -0.45
ACTN1-210ENST00000553779 MROH7-TTC4A0A0A0MT08 1334 aa12.22□□□□□ -0.45
ACTN1-210ENST00000553779 CXCL11O14625 94 aa12.22□□□□□ -0.45
ACTN1-210ENST00000553779 OSBPP22059 807 aa12.22□□□□□ -0.45
ACTN1-210ENST00000553779 GRK4P32298 578 aa12.22□□□□□ -0.45
ACTN1-210ENST00000553779 TFCP2Q12800 502 aa12.22□□□□□ -0.45
ACTN1-210ENST00000553779 HABP4Q5JVS0 413 aaKnown RBP12.22□□□□□ -0.45
ACTN1-210ENST00000553779 C17orf99Q6UX52 265 aa12.22□□□□□ -0.45
ACTN1-210ENST00000553779 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
ACTN1-210ENST00000553779 XAGE2Q96GT9 111 aa12.22□□□□□ -0.45
ACTN1-210ENST00000553779 RAI14Q9P0K7 980 aa12.22□□□□□ -0.45
ACTN1-210ENST00000553779 ZNF112Q9UJU3 913 aa12.22□□□□□ -0.45
ACTN1-210ENST00000553779 MYH8P13535 1937 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 GAKO14976 1311 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 PDS5AQ29RF7 1337 aaKnown RBP12.21□□□□□ -0.45
ACTN1-210ENST00000553779 TRIM75PA6NK02 468 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 LDHCP07864 332 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 CYP2C8P10632 490 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 TIMM10P62072 90 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 G3BP1Q13283 466 aaKnown RBP eCLIP12.21□□□□□ -0.455e-10■■□□□ 12.9
ACTN1-210ENST00000553779 ZFPM1Q8IX07 1006 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 DPF3Q92784 378 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 IDI2Q9BXS1 227 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 RNF208Q9H0X6 261 aa12.21□□□□□ -0.45
ACTN1-210ENST00000553779 TNPO2O14787 897 aaKnown RBP12.2□□□□□ -0.46
ACTN1-210ENST00000553779 GNAI2P04899 355 aa12.2□□□□□ -0.46
ACTN1-210ENST00000553779 PTPRAP18433 802 aa12.2□□□□□ -0.46
ACTN1-210ENST00000553779 RARSP54136 660 aaKnown RBP12.2□□□□□ -0.46
ACTN1-210ENST00000553779 MECOMQ03112 1051 aa12.2□□□□□ -0.46
ACTN1-210ENST00000553779 SLAIN1Q8ND83 568 aa12.2□□□□□ -0.46
ACTN1-210ENST00000553779 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.2□□□□□ -0.463e-7■■■■■ 36.9
ACTN1-210ENST00000553779 LRP2BPQ9P2M1 347 aa12.2□□□□□ -0.46
ACTN1-210ENST00000553779 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
ACTN1-210ENST00000553779 A0A0G2JLL6 359 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-210ENST00000553779 CTNND1O60716 968 aaKnown RBP12.19□□□□□ -0.46
ACTN1-210ENST00000553779 CCL5P13501 91 aa12.19□□□□□ -0.46
ACTN1-210ENST00000553779 PRKCZQ05513 592 aa12.19□□□□□ -0.46
ACTN1-210ENST00000553779 MTFR1Q15390 333 aa12.19□□□□□ -0.46
ACTN1-210ENST00000553779 PRRT2Q7Z6L0 340 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-210ENST00000553779 TEX11Q8IYF3 940 aa12.19□□□□□ -0.46
ACTN1-210ENST00000553779 SPATA5Q8NB90 893 aa12.19□□□□□ -0.46
ACTN1-210ENST00000553779 HTATIP2Q9BUP3 242 aa12.19□□□□□ -0.46
ACTN1-210ENST00000553779 RFX7Q2KHR2 1363 aa12.18□□□□□ -0.46
ACTN1-210ENST00000553779 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
ACTN1-210ENST00000553779 DDTLA6NHG4 134 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-210ENST00000553779 FAM196BA6NMK8 535 aa12.18□□□□□ -0.46
ACTN1-210ENST00000553779 UQCRFS1P1P0C7P4 283 aa12.18□□□□□ -0.46
ACTN1-210ENST00000553779 PABPC4Q13310 644 aaKnown RBP eCLIP12.18□□□□□ -0.46
ACTN1-210ENST00000553779 TTC39AQ5SRH9 613 aa12.18□□□□□ -0.46
ACTN1-210ENST00000553779 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
ACTN1-210ENST00000553779 ARHGAP45Q92619 1136 aa12.18□□□□□ -0.46
ACTN1-210ENST00000553779 CLUAP1Q96AJ1 413 aa12.18□□□□□ -0.46
ACTN1-210ENST00000553779 COA7Q96BR5 231 aa12.18□□□□□ -0.46
ACTN1-210ENST00000553779 DDX4Q9NQI0 724 aaKnown RBP12.18□□□□□ -0.46
ACTN1-210ENST00000553779 ATRNL1Q5VV63 1379 aa12.18□□□□□ -0.46
ACTN1-210ENST00000553779 PHF20L1A8MW92 1017 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 H0YGN5 161 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 ADCY3O60266 1144 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 FARP2O94887 1054 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-210ENST00000553779 BCRP11274 1271 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 CTGFP29279 349 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 GPAT2Q6NUI2 795 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 PI16Q6UXB8 463 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 TBC1D9Q6ZT07 1266 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 FTSJ3Q8IY81 847 aaKnown RBP12.17□□□□□ -0.46
ACTN1-210ENST00000553779 HMG20BQ9P0W2 317 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 SLC45A1Q9Y2W3 748 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 AFG3L2Q9Y4W6 797 aa12.17□□□□□ -0.46
ACTN1-210ENST00000553779 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 ALPK3Q96L96 1907 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 GPR75-ASB3A0A0A6YYF3 556 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 CCER2I3L3R5 266 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 BAG3O95817 575 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 MAP4K4O95819 1239 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-210ENST00000553779 ELNP15502 786 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 MOGSQ13724 837 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 CCDC158Q5M9N0 1113 aa12.16□□□□□ -0.46
ACTN1-210ENST00000553779 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms