RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 NEURL4Q96JN8 1562 aa17.3■□□□□ 0.36
ARHGEF40-202ENST00000553709 ERO1AQ96HE7 468 aa17.3■□□□□ 0.36
ARHGEF40-202ENST00000553709 FRMPD1Q5SYB0 1578 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 SH3TC1Q8TE82 1336 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 OTUD7BQ6GQQ9 843 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 PREX1Q8TCU6 1659 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 CUTAO60888 179 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 DDX17Q92841 729 aaKnown RBP17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 RTCBQ9Y3I0 505 aaKnown RBP17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 RHOXF2BP0C7M4 288 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 DIS3L2Q8IYB7 885 aaKnown RBP17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 DDX12PQ92771 950 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 RHOXF2Q9BQY4 288 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 ACTN2P35609 894 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 TULP4Q9NRJ4 1543 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 SSH2Q76I76 1423 aa17.29■□□□□ 0.36
ARHGEF40-202ENST00000553709 PDE8AO60658 829 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 PARP1P09874 1014 aaKnown RBP17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 CCT6AP40227 531 aaKnown RBP17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 PARP10Q53GL7 1025 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 ZFP91Q96JP5 570 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 ZC3H12CQ9C0D7 883 aaKnown RBP17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 TMEM63CQ9P1W3 806 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 RSPH14Q9UHP6 348 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 PLCD1P51178 756 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 FANCCQ00597 558 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 IGSF22Q8N9C0 903 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 SSH3Q8TE77 659 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 NDUFB9Q9Y6M9 179 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 POLR1AO95602 1720 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 CAPN2P17655 700 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 HS2ST1Q7LGA3 356 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 C8orf37Q96NL8 207 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 OGFRQ9NZT2 677 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 CTNND2Q9UQB3 1225 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 FAM13AO94988 1023 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 PPP1R2P41236 205 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 HDAC9Q9UKV0 1011 aa17.28■□□□□ 0.36
ARHGEF40-202ENST00000553709 CCDC122Q5T0U0 273 aa17.27■□□□□ 0.36
ARHGEF40-202ENST00000553709 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
ARHGEF40-202ENST00000553709 JAG2Q9Y219 1238 aa17.27■□□□□ 0.36
ARHGEF40-202ENST00000553709 ATP5JP18859 108 aa17.27■□□□□ 0.36
ARHGEF40-202ENST00000553709 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
ARHGEF40-202ENST00000553709 JAK2O60674 1132 aa17.27■□□□□ 0.36
ARHGEF40-202ENST00000553709 ZNF202O95125 648 aa17.27■□□□□ 0.36
ARHGEF40-202ENST00000553709 EVCP57679 992 aa17.27■□□□□ 0.36
ARHGEF40-202ENST00000553709 LETM2Q2VYF4 491 aa17.27■□□□□ 0.36
ARHGEF40-202ENST00000553709 PTPRMP28827 1452 aa17.27■□□□□ 0.35
ARHGEF40-202ENST00000553709 A1BGP04217 495 aa17.27■□□□□ 0.35
ARHGEF40-202ENST00000553709 SV2BQ7L1I2 683 aa17.27■□□□□ 0.35
ARHGEF40-202ENST00000553709 IQGAP1P46940 1657 aa17.27■□□□□ 0.35
ARHGEF40-202ENST00000553709 V9GY48 417 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 TRIM14Q14142 442 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 OGFOD1Q8N543 542 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 MLKLQ8NB16 471 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 POLR2DO15514 142 aaKnown RBP17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 NLRP12P59046 1061 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 ATRIPQ8WXE1 791 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 VPS18Q9P253 973 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 IKBKGQ9Y6K9 419 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 DTNBO60941 627 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 ME3Q16798 604 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 PIK3AP1Q6ZUJ8 805 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 DSCC1Q9BVC3 393 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 TSGA10Q9BZW7 698 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 IMPACTQ9P2X3 320 aa17.26■□□□□ 0.35
ARHGEF40-202ENST00000553709 VAV2P52735 878 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 TTC6Q86TZ1 520 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 ZNF496Q96IT1 587 aaPredicted RBP17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 KRT40Q6A162 431 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 NAP1L4Q99733 375 aaKnown RBP17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 RIOK3O14730 519 aaKnown RBP17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 PPP2R3AQ06190 1150 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 BTG4Q9NY30 223 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 PHACTR2O75167 634 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 LPIN2Q92539 896 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 VPS16Q9H269 839 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 HOMER2Q9NSB8 354 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 MED14O60244 1454 aa17.25■□□□□ 0.35
ARHGEF40-202ENST00000553709 A0A1W2PRG0 241 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 TBC1D8BQ0IIM8 1120 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 NOC4LQ9BVI4 516 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 PAXIP1Q6ZW49 1069 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 C17orf53Q8N3J3 647 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 NSRP1Q9H0G5 558 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 NEURL1BA8MQ27 555 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 GTF3C6Q969F1 213 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 MPHOSPH6Q99547 160 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 SYNRGQ9UMZ2 1314 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 E7EWF7 191 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 CCDC65Q8IXS2 484 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 CCDC77Q9BR77 488 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 SYNCQ9H7C4 482 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 TTF2Q9UNY4 1162 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 ATP2C2O75185 946 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 HIBADHP31937 336 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 PDE4DQ08499 809 aa17.24■□□□□ 0.35
ARHGEF40-202ENST00000553709 HDXQ7Z353 690 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms