RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TPTE2Q6XPS3 522 aa7.43□□□□□ -1.22
SCFD1-210ENST00000553693 ANKRD24Q8TF21 1146 aa7.43□□□□□ -1.22
SCFD1-210ENST00000553693 GATA6Q92908 595 aa7.43□□□□□ -1.22
SCFD1-210ENST00000553693 WDR89Q96FK6 387 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-210ENST00000553693 NECAB3Q96P71 396 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-210ENST00000553693 SETDB2Q96T68 719 aa7.43□□□□□ -1.22
SCFD1-210ENST00000553693 OSBPL7Q9BZF2 842 aa7.43□□□□□ -1.22
SCFD1-210ENST00000553693 C12orf49Q9H741 205 aa7.43□□□□□ -1.22
SCFD1-210ENST00000553693 FAM8A1Q9UBU6 413 aa7.43□□□□□ -1.22
SCFD1-210ENST00000553693 CYP26A1O43174 497 aa7.42□□□□□ -1.22
SCFD1-210ENST00000553693 COL19A1Q14993 1142 aa7.42□□□□□ -1.22
SCFD1-210ENST00000553693 FBLN7Q53RD9 439 aa7.42□□□□□ -1.22
SCFD1-210ENST00000553693 ACSBG1Q96GR2 724 aa7.42□□□□□ -1.22
SCFD1-210ENST00000553693 FANCD2OSQ96PS1 177 aa7.42□□□□□ -1.22
SCFD1-210ENST00000553693 CBX8Q9HC52 389 aa7.42□□□□□ -1.22
SCFD1-210ENST00000553693 WWC3Q9ULE0 1092 aa7.42□□□□□ -1.22
SCFD1-210ENST00000553693 PCDHGC5Q9Y5F6 944 aa7.42□□□□□ -1.22
SCFD1-210ENST00000553693 FAM170BA6NMN3 283 aa7.41□□□□□ -1.22
SCFD1-210ENST00000553693 ENC1O14682 589 aa7.41□□□□□ -1.22
SCFD1-210ENST00000553693 HOXA10P31260 410 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-210ENST00000553693 MSMPQ1L6U9 139 aa7.41□□□□□ -1.22
SCFD1-210ENST00000553693 MAP1SQ66K74 1059 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-210ENST00000553693 SEZ6L2Q6UXD5 910 aa7.41□□□□□ -1.22
SCFD1-210ENST00000553693 AEBP1Q8IUX7 1158 aa7.41□□□□□ -1.22
SCFD1-210ENST00000553693 SMYD4Q8IYR2 804 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-210ENST00000553693 STK35Q8TDR2 534 aa7.41□□□□□ -1.22
SCFD1-210ENST00000553693 ANGEL1Q9UNK9 670 aaKnown RBP7.41□□□□□ -1.22
SCFD1-210ENST00000553693 PRPF40AO75400 957 aaKnown RBP7.4□□□□□ -1.22
SCFD1-210ENST00000553693 USP17L7P0C7H9 530 aa7.4□□□□□ -1.22
SCFD1-210ENST00000553693 ZNF252P-AS1Q0IIN9 211 aa7.4□□□□□ -1.22
SCFD1-210ENST00000553693 LRRC14Q15048 493 aa7.4□□□□□ -1.22
SCFD1-210ENST00000553693 SCARA3Q6AZY7 606 aa7.4□□□□□ -1.22
SCFD1-210ENST00000553693 VSIG10LQ86VR7 867 aa7.4□□□□□ -1.22
SCFD1-210ENST00000553693 SHISA5Q8N114 240 aa7.4□□□□□ -1.22
SCFD1-210ENST00000553693 DISC1Q9NRI5 854 aa7.4□□□□□ -1.22
SCFD1-210ENST00000553693 C1GALT1Q9NS00 363 aa7.4□□□□□ -1.22
SCFD1-210ENST00000553693 DYNC1LI2O43237 492 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-210ENST00000553693 RNGTTO60942 597 aaKnown RBP7.39□□□□□ -1.23
SCFD1-210ENST00000553693 FBXO24O75426 580 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 TRIM37O94972 964 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 GNA15P30679 374 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 ERVK-24P63145 666 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 TTLL4Q14679 1199 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 CYP27C1Q4G0S4 372 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 ZC3H12AQ5D1E8 599 aaKnown RBP7.39□□□□□ -1.23
SCFD1-210ENST00000553693 LLGL2Q6P1M3 1020 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 SPOCD1Q6ZMY3 1216 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 ZNF765Q7L2R6 523 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 ABI1Q8IZP0 508 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 GPBAR1Q8TDU6 330 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 LRRC4CQ9HCJ2 640 aa7.39□□□□□ -1.23
SCFD1-210ENST00000553693 PRNPP04156 253 aa7.38□□□□□ -1.23
SCFD1-210ENST00000553693 HCLS1P14317 486 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-210ENST00000553693 EIF4BP23588 611 aaKnown RBP7.38□□□□□ -1.23
SCFD1-210ENST00000553693 OGFOD3Q6PK18 319 aa7.38□□□□□ -1.23
SCFD1-210ENST00000553693 LGR6Q9HBX8 967 aa7.38□□□□□ -1.23
SCFD1-210ENST00000553693 BSDC1Q9NW68 430 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-210ENST00000553693 CACNA2D2Q9NY47 1150 aa7.38□□□□□ -1.23
SCFD1-210ENST00000553693 TTF2Q9UNY4 1162 aaKnown RBP7.38□□□□□ -1.23
SCFD1-210ENST00000553693 PAGE1O75459 146 aa7.37□□□□□ -1.23
SCFD1-210ENST00000553693 EAPPQ56P03 285 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-210ENST00000553693 RNF214Q8ND24 703 aa7.37□□□□□ -1.23
SCFD1-210ENST00000553693 PCOLCE2Q9UKZ9 415 aa7.37□□□□□ -1.23
SCFD1-210ENST00000553693 ANKRD33BA6NCL7 494 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 FAM87AP0C7U9 286 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 BMP6P22004 513 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 CDK5R2Q13319 367 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 PCNX4Q63HM2 1172 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 SV2BQ7L1I2 683 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 ISL2Q96A47 359 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 FBXL18Q96ME1 805 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 SSU72Q9NP77 194 aaKnown RBP7.36□□□□□ -1.23
SCFD1-210ENST00000553693 PICK1Q9NRD5 415 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 CCDC39Q9UFE4 941 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 CYP8B1Q9UNU6 501 aa7.36□□□□□ -1.23
SCFD1-210ENST00000553693 NEFMP07197 916 aa7.35□□□□□ -1.23
SCFD1-210ENST00000553693 CELA3AP09093 270 aa7.35□□□□□ -1.23
SCFD1-210ENST00000553693 CBLL1Q75N03 491 aa7.35□□□□□ -1.23
SCFD1-210ENST00000553693 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.35□□□□□ -1.23
SCFD1-210ENST00000553693 GRIN3AQ8TCU5 1115 aa7.34□□□□□ -1.23
SCFD1-210ENST00000553693 FANCGO15287 622 aa7.33□□□□□ -1.24
SCFD1-210ENST00000553693 STK11IPQ8N1F8 1099 aa7.33□□□□□ -1.24
SCFD1-210ENST00000553693 ELMO3Q96BJ8 720 aa7.33□□□□□ -1.24
SCFD1-210ENST00000553693 DUSP9Q99956 384 aaKnown RBP7.33□□□□□ -1.24
SCFD1-210ENST00000553693 ZC3H7BQ9UGR2 993 aaKnown RBP7.33□□□□□ -1.24
SCFD1-210ENST00000553693 PCDHA4Q9UN74 947 aa7.33□□□□□ -1.24
SCFD1-210ENST00000553693 AK5Q9Y6K8 562 aa7.33□□□□□ -1.24
SCFD1-210ENST00000553693 CCDC85BQ15834 202 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-210ENST00000553693 PPM1JQ5JR12 505 aa7.32□□□□□ -1.24
SCFD1-210ENST00000553693 KCT2Q8NC54 265 aa7.32□□□□□ -1.24
SCFD1-210ENST00000553693 AGBL5Q8NDL9 886 aa7.32□□□□□ -1.24
SCFD1-210ENST00000553693 FLCNQ8NFG4 579 aa7.32□□□□□ -1.24
SCFD1-210ENST00000553693 MISP3Q96FF7 219 aa7.32□□□□□ -1.24
SCFD1-210ENST00000553693 ASIC4Q96FT7 647 aa7.32□□□□□ -1.24
SCFD1-210ENST00000553693 DUSP23Q9BVJ7 150 aa7.32□□□□□ -1.24
SCFD1-210ENST00000553693 DCDC2CA8MYV0 355 aa7.31□□□□□ -1.24
SCFD1-210ENST00000553693 ITGB5P18084 799 aa7.31□□□□□ -1.24
SCFD1-210ENST00000553693 LMNB1P20700 586 aa7.31□□□□□ -1.24
SCFD1-210ENST00000553693 ZBTB37Q5TC79 503 aa7.31□□□□□ -1.24
SCFD1-210ENST00000553693 RASIP1Q5U651 963 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms