RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 TMEM260Q9NX78 707 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 STARD13Q9Y3M8 1113 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 A0A1W2PQH9 124 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 FAM177BA6PVY3 158 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 NEURL1BA8MQ27 555 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 UPK3BL1B0FP48 263 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 UPK3BL2E5RIL1 263 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 EIF4EBP3O60516 100 aaPredicted RBP5.6□□□□□ -1.51
TDP1-207ENST00000553617 CDC45O75419 566 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 RGS9O75916 674 aaPredicted RBP5.6□□□□□ -1.51
TDP1-207ENST00000553617 ECEL1O95672 775 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 CTSBP07858 339 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 GSK3AP49840 483 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 PIP4K2BP78356 416 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 C19orf57Q0VDD7 668 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 KCNMA1Q12791 1236 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 SQSTM1Q13501 440 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 RNFT1Q5M7Z0 435 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 LARP1BQ659C4 914 aaKnown RBP5.6□□□□□ -1.51
TDP1-207ENST00000553617 KIAA0907Q7Z7F0 614 aaPredicted RBP5.6□□□□□ -1.51
TDP1-207ENST00000553617 TMEM40Q8WWA1 233 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 TM9SF2Q99805 663 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 CCDC86Q9H6F5 360 aaKnown RBP5.6□□□□□ -1.51
TDP1-207ENST00000553617 ANTXR1Q9H6X2 564 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 FANCLQ9NW38 375 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 TACC3Q9Y6A5 838 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 SNCAIPQ9Y6H5 919 aa5.6□□□□□ -1.51
TDP1-207ENST00000553617 ESYT3A0FGR9 886 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 ZNF862O60290 1169 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 EIF5BO60841 1220 aaKnown RBP5.59□□□□□ -1.51
TDP1-207ENST00000553617 HTR3BO95264 441 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 GUCY2CP25092 1073 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 GSTM4Q03013 218 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 IFRD2Q12894 506 aaPredicted RBP5.59□□□□□ -1.51
TDP1-207ENST00000553617 INPP5AQ14642 412 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 LRRFIP1Q32MZ4 808 aaKnown RBP5.59□□□□□ -1.51
TDP1-207ENST00000553617 C2orf27AQ580R0 203 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 WIPI1Q5MNZ9 446 aaPredicted RBP5.59□□□□□ -1.51
TDP1-207ENST00000553617 RNF187Q5TA31 235 aaPredicted RBP5.59□□□□□ -1.51
TDP1-207ENST00000553617 MRM1Q6IN84 353 aaKnown RBP5.59□□□□□ -1.51
TDP1-207ENST00000553617 LRFN4Q6PJG9 635 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 SLCO4C1Q6ZQN7 724 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 TTC6Q86TZ1 520 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 APPBP2Q92624 585 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 ZNF669Q96BR6 464 aaPredicted RBP5.59□□□□□ -1.51
TDP1-207ENST00000553617 PLPPR2Q96GM1 343 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 OSGEPQ9NPF4 335 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 GGA1Q9UJY5 639 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 PCDHA4Q9UN74 947 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 PPME1Q9Y570 386 aa5.59□□□□□ -1.51
TDP1-207ENST00000553617 B2RBV5 119 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 DNAJA2O60884 412 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 ALBP02768 609 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 CYP11A1P05108 521 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 ACRP10323 421 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 AFF1P51825 1210 aaKnown RBP5.58□□□□□ -1.52
TDP1-207ENST00000553617 CHMP4BP1P59074 171 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 KRT76Q01546 638 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 POU4F3Q15319 338 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 OVOS1Q6IE37 1185 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 C6orf15Q6UXA7 325 aaPredicted RBP5.58□□□□□ -1.52
TDP1-207ENST00000553617 ILDR2Q71H61 639 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 CYFIP1Q7L576 1253 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 HOMER1Q86YM7 354 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 IL22RA1Q8N6P7 574 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 ST13P5Q8NFI4 369 aaPredicted RBP5.58□□□□□ -1.52
TDP1-207ENST00000553617 NUDT8Q8WV74 236 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 REV1Q9UBZ9 1251 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 NSFL1CQ9UNZ2 370 aaKnown RBP5.58□□□□□ -1.52
TDP1-207ENST00000553617 PRKAB1Q9Y478 270 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 CORINQ9Y5Q5 1042 aa5.58□□□□□ -1.52
TDP1-207ENST00000553617 LINC01387J3KSC0 135 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 TNFRSF10CO14798 259 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 FSCN2O14926 492 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 SUZ12Q15022 739 aaKnown RBP5.57□□□□□ -1.52
TDP1-207ENST00000553617 PPP2R5EQ16537 467 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 KIF4BQ2VIQ3 1234 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 MTERF2Q49AM1 385 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 ARSHQ5FYA8 562 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 TMEM201Q5SNT2 666 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 INTS3Q68E01 1043 aaKnown RBP5.57□□□□□ -1.52
TDP1-207ENST00000553617 TXNDC11Q6PKC3 985 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 FILIP1Q7Z7B0 1213 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 FAM178BQ8IXR5 827 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 GOLGA6L1Q8N7Z2 621 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 THAP3Q8WTV1 239 aaPredicted RBP5.57□□□□□ -1.52
TDP1-207ENST00000553617 SLC7A3Q8WY07 619 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 ACSBG1Q96GR2 724 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 CORO1BQ9BR76 489 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 ZC3H12CQ9C0D7 883 aaKnown RBP5.57□□□□□ -1.52
TDP1-207ENST00000553617 TMX1Q9H3N1 280 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 JPH1Q9HDC5 661 aaPredicted RBP5.57□□□□□ -1.52
TDP1-207ENST00000553617 IFT57Q9NWB7 429 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 GMIPQ9P107 970 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 ZMYM5Q9UJ78 669 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 GDF2Q9UK05 429 aaPredicted RBP5.57□□□□□ -1.52
TDP1-207ENST00000553617 LEMD3Q9Y2U8 911 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 NOP58Q9Y2X3 529 aaKnown RBP5.57□□□□□ -1.52
TDP1-207ENST00000553617 PCDHGC5Q9Y5F6 944 aa5.57□□□□□ -1.52
TDP1-207ENST00000553617 IGF1RP08069 1367 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms