RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 JAKMIP1Q96N16 626 aaKnown RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 UPF3BQ9BZI7 483 aaKnown RBP7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 PDRG1Q9NUG6 133 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 LMBRD1Q9NUN5 540 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 TBC1D2BQ9UPU7 963 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 LRP5O75197 1615 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 UBN2Q6ZU65 1347 aa7.18□□□□□ -1.26
VIPAS39-204ENST00000553576 BTAF1O14981 1849 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 NHSQ6T4R5 1651 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 UBAP1LF5GYI3 381 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 PPFIA3O75145 1194 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 PDE8BO95263 885 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 HMGB1P09429 215 aaKnown RBP7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 CCNYL3P0C7X3 344 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 FGFR2P21802 821 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 RPS6KB1P23443 525 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 PIP4K2BP78356 416 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 SLC10A5Q5PT55 438 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 L1TD1Q5T7N2 865 aaKnown RBP7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 SUSD4Q5VX71 490 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 SYNE4Q8N205 404 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 FBXL16Q8N461 479 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 MPNDQ8N594 471 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 EDC3Q96F86 508 aaKnown RBP7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 UTP14AQ9BVJ6 771 aaKnown RBP7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 KLF16Q9BXK1 252 aaPredicted RBP7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 GREM2Q9H772 168 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 ZNF330Q9Y3S2 320 aaPredicted RBP7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 MROH5Q6ZUA9 1318 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 CNTNAP4Q9C0A0 1308 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 A0A1B0GUL6 1792 aa7.17□□□□□ -1.26
VIPAS39-204ENST00000553576 GOLIM4O00461 696 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 MAN1A2O60476 641 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 GPTP24298 496 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 ARID4AP29374 1257 aaPredicted RBP7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 KCNJ4P48050 445 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 PKP1Q13835 747 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 ATP2B3Q16720 1220 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 LINC01559Q495D7 138 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 TAF7LQ5H9L4 462 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 BLOC1S2Q6QNY1 142 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 ACSBG1Q96GR2 724 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 NGLY1Q96IV0 654 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 DNAJC2Q99543 621 aaKnown RBP7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 AGXT2Q9BYV1 514 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 UNC93B1Q9H1C4 597 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 ZNF652Q9Y2D9 606 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 CHD4Q14839 1912 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 WDR33Q9C0J8 1336 aaKnown RBP7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 RIC1Q4ADV7 1423 aa7.16□□□□□ -1.26
VIPAS39-204ENST00000553576 KCNQ2O43526 872 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 RPS6KA4O75676 772 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 NTSR2O95665 410 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 UQCRFS1P1P0C7P4 283 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 HSPD1P10809 573 aaKnown RBP7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 VARSP26640 1264 aaKnown RBP7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 ADORA1P30542 326 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 KRT76Q01546 638 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 EXOSC10Q01780 885 aaKnown RBP7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 TOB2Q14106 344 aaPredicted RBP7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 TTF1Q15361 905 aaPredicted RBP7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 UBE3CQ15386 1083 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 SF3B3Q15393 1217 aaKnown RBP7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 ME3Q16798 604 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 CCDC152Q4G0S7 254 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 METTL24Q5JXM2 366 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 TTC39AQ5SRH9 613 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 GORABQ5T7V8 394 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 ZSCAN25Q6NSZ9 544 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 DDX46Q7L014 1031 aaKnown RBP7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 TMEM87AQ8NBN3 555 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 LPIN2Q92539 896 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 BAP1Q92560 729 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 CHMP4CQ96CF2 233 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 NEK1Q96PY6 1258 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 ARXQ96QS3 562 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 SEC62Q99442 399 aaKnown RBP7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 CNNM1Q9NRU3 951 aa7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 CCDC9Q9Y3X0 531 aaKnown RBP7.15□□□□□ -1.26
VIPAS39-204ENST00000553576 SCN7AQ01118 1682 aa7.15□□□□□ -1.27
VIPAS39-204ENST00000553576 COL24A1Q17RW2 1714 aa7.15□□□□□ -1.27
VIPAS39-204ENST00000553576 MYH15Q9Y2K3 1946 aa7.15□□□□□ -1.27
VIPAS39-204ENST00000553576 GOLGA6L3A6NEY3 463 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 STX6O43752 255 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 CYP21A2P08686 494 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 CPA1P15085 419 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 TAF1P21675 1872 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 EVCP57679 992 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 ZNF445P59923 1031 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 PUM3Q15397 648 aaKnown RBP7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 MCTP1Q6DN14 999 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 DHX32Q7L7V1 743 aaKnown RBP7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 ZNF511Q8NB15 262 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 LINC00116Q8NCU8 138 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 APPBP2Q92624 585 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 OSBP2Q969R2 916 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 C8orf37Q96NL8 207 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 CTNNA3Q9UI47 895 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 TPCN1Q9ULQ1 816 aa7.14□□□□□ -1.27
VIPAS39-204ENST00000553576 SMC3Q9UQE7 1217 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms