RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 MEGF10Q96KG7 1140 aa6.82□□□□□ -1.32
ATXN3-222ENST00000553570 BCL2L13Q9BXK5 485 aa6.82□□□□□ -1.32
ATXN3-222ENST00000553570 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
ATXN3-222ENST00000553570 NAIPQ13075 1403 aa6.82□□□□□ -1.32
ATXN3-222ENST00000553570 FAM135AQ9P2D6 1515 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 A2ML1A8K2U0 1454 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 ERVK-7P63135 1459 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 DYRK3O43781 588 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 ADAM11O75078 769 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 ALX3O95076 343 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 WISP1O95388 367 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 POLR3DP05423 398 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-222ENST00000553570 EDN3P14138 238 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 USPL1Q5W0Q7 1092 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.81□□□□□ -1.32
ATXN3-222ENST00000553570 FBXO33Q7Z6M2 555 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 GALNT12Q8IXK2 581 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 DZIP1LQ8IYY4 767 aaKnown RBP6.81□□□□□ -1.32
ATXN3-222ENST00000553570 TMC1Q8TDI8 760 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 BHLHE41Q9C0J9 482 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-222ENST00000553570 SEMA6BQ9H3T3 888 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 SETD5Q9C0A6 1442 aa6.81□□□□□ -1.32
ATXN3-222ENST00000553570 UNCXA6NJT0 531 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 H3BRJ5 948 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 GPR182O15218 404 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 TREHO43280 583 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 H2AFB1P0C5Y9 115 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 H2AFB2P0C5Z0 115 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 CDC25BP30305 580 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 CD68P34810 354 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-222ENST00000553570 TAGLNQ01995 201 aaKnown RBP6.8□□□□□ -1.32
ATXN3-222ENST00000553570 HGSNATQ68CP4 663 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 SPATA31D1Q6ZQQ2 1576 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 VN1R5Q7Z5H4 357 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 KLHDC7BQ96G42 594 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 CARD10Q9BWT7 1032 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 AKTIPQ9H8T0 292 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 SLC52A1Q9NWF4 448 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 EFCAB6Q5THR3 1501 aa6.8□□□□□ -1.32
ATXN3-222ENST00000553570 NLRP1Q9C000 1473 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 VWDEQ8N2E2 1590 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 A0A1W2PP55 124 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-222ENST00000553570 ORC1Q13415 861 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 DSC3Q14574 896 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 RGL3Q3MIN7 710 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 XP32Q5T750 250 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 KLHL23Q8NBE8 558 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 DCAF11Q8TEB1 546 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 WNT8BQ93098 351 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 TP53INP1Q96A56 240 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
ATXN3-222ENST00000553570 SYNMO15061 1565 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 HFM1A2PYH4 1435 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 ARHGAP31Q2M1Z3 1444 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 SOX1O00570 391 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-222ENST00000553570 DDX3YO15523 660 aaKnown RBP6.78□□□□□ -1.32
ATXN3-222ENST00000553570 P4HBP07237 508 aaKnown RBP6.78□□□□□ -1.32
ATXN3-222ENST00000553570 PIP4K2BP78356 416 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 FMR1Q06787 632 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATXN3-222ENST00000553570 PDE3BQ13370 1112 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 COL19A1Q14993 1142 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 KIAA1211Q6ZU35 1233 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 AGGF1Q8N302 714 aaeCLIP6.78□□□□□ -1.32
ATXN3-222ENST00000553570 GIPC2Q8TF65 315 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 ALKBH8Q96BT7 664 aaKnown RBP6.78□□□□□ -1.32
ATXN3-222ENST00000553570 SLC26A8Q96RN1 970 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 TCF12Q99081 682 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 OSGEPQ9NPF4 335 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 SEC31BQ9NQW1 1179 aa6.78□□□□□ -1.32
ATXN3-222ENST00000553570 IQGAP1P46940 1657 aa6.77□□□□□ -1.32
ATXN3-222ENST00000553570 LMTK2Q8IWU2 1503 aa6.77□□□□□ -1.33
ATXN3-222ENST00000553570 METTL12A8MUP2 240 aa6.77□□□□□ -1.33
ATXN3-222ENST00000553570 LTKP29376 864 aa6.77□□□□□ -1.33
ATXN3-222ENST00000553570 PLCB3Q01970 1234 aa6.77□□□□□ -1.33
ATXN3-222ENST00000553570 KIAA0319Q5VV43 1072 aa6.77□□□□□ -1.33
ATXN3-222ENST00000553570 CCNJLQ8IV13 435 aa6.77□□□□□ -1.33
ATXN3-222ENST00000553570 NIF3L1Q9GZT8 377 aa6.77□□□□□ -1.33
ATXN3-222ENST00000553570 RAB3GAP2Q9H2M9 1393 aa6.77□□□□□ -1.33
ATXN3-222ENST00000553570 ZNF335Q9H4Z2 1342 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-222ENST00000553570 EAPPQ56P03 285 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-222ENST00000553570 FAM117BQ6P1L5 589 aa6.76□□□□□ -1.33
ATXN3-222ENST00000553570 UBL7Q96S82 380 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-222ENST00000553570 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
ATXN3-222ENST00000553570 RPRD2Q5VT52 1461 aaKnown RBP6.76□□□□□ -1.33
ATXN3-222ENST00000553570 TMEM131LA2VDJ0 1609 aa6.76□□□□□ -1.33
ATXN3-222ENST00000553570 CPNE3O75131 537 aaKnown RBP6.75□□□□□ -1.33
ATXN3-222ENST00000553570 NEFLP07196 543 aa6.75□□□□□ -1.33
ATXN3-222ENST00000553570 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-222ENST00000553570 GRIA4P48058 902 aa6.75□□□□□ -1.33
ATXN3-222ENST00000553570 CABP4P57796 275 aa6.75□□□□□ -1.33
ATXN3-222ENST00000553570 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATXN3-222ENST00000553570 UBASH3BQ8TF42 649 aa6.75□□□□□ -1.33
ATXN3-222ENST00000553570 DNAJC25Q9H1X3 360 aa6.75□□□□□ -1.33
ATXN3-222ENST00000553570 CLTCL1P53675 1640 aa6.75□□□□□ -1.33
ATXN3-222ENST00000553570 PTPRTO14522 1441 aa6.75□□□□□ -1.33
ATXN3-222ENST00000553570 NPHP4O75161 1426 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-222ENST00000553570 NOS1P29475 1434 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms