RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 NDUFAF2Q8N183 169 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 CCDC191Q8NCU4 936 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 CDK5RAP3Q96JB5 506 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 TTC14Q96N46 770 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 NOL10Q9BSC4 688 aaKnown RBP5.76□□□□□ -1.49
PFDN5-219ENST00000553171 LNPKQ9C0E8 428 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 CABP2Q9NPB3 220 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 CASS4Q9NQ75 786 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 TMEM63CQ9P1W3 806 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 USP25Q9UHP3 1055 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 TMCC3Q9ULS5 477 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 SUFUQ9UMX1 484 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 RABL2BQ9UNT1 228 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 ZNF232Q9UNY5 417 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 TBC1D2BQ9UPU7 963 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 CELF2O95319 508 aaKnown RBP5.75□□□□□ -1.49
PFDN5-219ENST00000553171 FGAP02671 866 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 MSL3P1P0C860 447 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 SRPK2P78362 688 aaKnown RBP5.75□□□□□ -1.49
PFDN5-219ENST00000553171 IRX1P78414 480 aaPredicted RBP5.75□□□□□ -1.49
PFDN5-219ENST00000553171 CCDC15Q0P6D6 951 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 CHAF1AQ13111 956 aaPredicted RBP5.75□□□□□ -1.49
PFDN5-219ENST00000553171 NFE2L2Q16236 605 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 ALDH1L2Q3SY69 923 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 GOLGA6L1Q8N7Z2 621 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 KRI1Q8N9T8 703 aaKnown RBP5.75□□□□□ -1.49
PFDN5-219ENST00000553171 FRS2Q8WU20 508 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 CSRNP1Q96S65 589 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 SIN3AQ96ST3 1273 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 TSPY26PQ9H489 355 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 PRKRIP1Q9H875 184 aaPredicted RBP5.75□□□□□ -1.49
PFDN5-219ENST00000553171 VEZTQ9HBM0 779 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 CUEDC1Q9NWM3 386 aaPredicted RBP5.75□□□□□ -1.49
PFDN5-219ENST00000553171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.75□□□□□ -1.49
PFDN5-219ENST00000553171 G3BP2Q9UN86 482 aaKnown RBP5.75□□□□□ -1.49
PFDN5-219ENST00000553171 ZDBF2Q9HCK1 2354 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 PALLDQ8WX93 1383 aa5.75□□□□□ -1.49
PFDN5-219ENST00000553171 CPSF1Q10570 1443 aaKnown RBP5.74□□□□□ -1.49
PFDN5-219ENST00000553171 AKAP11Q9UKA4 1901 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 HTTP42858 3142 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 CENPFP49454 3210 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 PLEKHG3A1L390 1219 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 TRIM66O15016 1216 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 GNPATO15228 680 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 RGS20O76081 388 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 S100BP04271 92 aaPredicted RBP5.74□□□□□ -1.49
PFDN5-219ENST00000553171 ABL2P42684 1182 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 NOP2P46087 812 aaKnown RBP5.74□□□□□ -1.49
PFDN5-219ENST00000553171 ZNF131P52739 623 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 RBM5P52756 815 aaKnown RBP eCLIP5.74□□□□□ -1.49
PFDN5-219ENST00000553171 SH3BGRP55822 239 aaPredicted RBP5.74□□□□□ -1.49
PFDN5-219ENST00000553171 GABPB1Q06547 395 aaPredicted RBP5.74□□□□□ -1.49
PFDN5-219ENST00000553171 TRIM29Q14134 588 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 TRAPPC3LQ5T215 181 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 RNF187Q5TA31 235 aaPredicted RBP5.74□□□□□ -1.49
PFDN5-219ENST00000553171 MICALL1Q8N3F8 863 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 STAG2Q8N3U4 1231 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 PAF1Q8N7H5 531 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 PHC3Q8NDX5 983 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 TMC1Q8TDI8 760 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 GIMAP1Q8WWP7 306 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 CCDC34Q96HJ3 373 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 CDHR1Q96JP9 859 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 GBP4Q96PP9 640 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 CEP89Q96ST8 783 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 SLX1AQ9BQ83 275 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 C1QTNF1Q9BXJ1 281 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 BCL2L13Q9BXK5 485 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 ALDH8A1Q9H2A2 487 aaPredicted RBP5.74□□□□□ -1.49
PFDN5-219ENST00000553171 TRPV5Q9NQA5 729 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 HOXC10Q9NYD6 342 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 POGKQ9P215 609 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 MAFFQ9ULX9 164 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 LZTS1Q9Y250 596 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 NUDCQ9Y266 331 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 PCDHGA4Q9Y5G9 962 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 PRUNE2Q8WUY3 3088 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 TRANK1O15050 2925 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 KIF1BO60333 1816 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 TTC21AQ8NDW8 1320 aa5.74□□□□□ -1.49
PFDN5-219ENST00000553171 EPG5Q9HCE0 2579 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 NUP155O75694 1391 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 TMEM110-MUSTN1A8MSY1 372 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 OATP04181 439 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 XBP1P17861 261 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 FAM160A1Q05DH4 1040 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 EIF2B5Q13144 721 aaKnown RBP5.73□□□□□ -1.49
PFDN5-219ENST00000553171 UBE4AQ14139 1066 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 LRIT3Q3SXY7 679 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 TJAP1Q5JTD0 557 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 TTC39BQ5VTQ0 682 aaPredicted RBP5.73□□□□□ -1.49
PFDN5-219ENST00000553171 KIAA1211Q6ZU35 1233 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 ELOA2Q8IYF1 753 aaPredicted RBP5.73□□□□□ -1.49
PFDN5-219ENST00000553171 MYOCDQ8IZQ8 938 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 CCDC89Q8N998 374 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 LINC00116Q8NCU8 138 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 DCAF11Q8TEB1 546 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 PPM1EQ8WY54 764 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 DPF3Q92784 378 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 ARMC5Q96C12 935 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms