RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 DDB1Q16531 1140 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 ARMCX6Q7L4S7 300 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 ENGASEQ8NFI3 743 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 OSBP2Q969R2 916 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 TSPYL1Q9H0U9 437 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 HELLSQ9NRZ9 838 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 THRAP3Q9Y2W1 955 aaKnown RBP8.48□□□□□ -1.05
BEST3-212ENST00000553096 ERVV-1B6SEH8 477 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 IRS4O14654 1257 aaPredicted RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 HSPD1P10809 573 aaKnown RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 SFPQP23246 707 aaKnown RBP eCLIP8.47□□□□□ -1.05
BEST3-212ENST00000553096 ADD1P35611 737 aaKnown RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 CRKLP46109 303 aaKnown RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 IFIT5Q13325 482 aaKnown RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 AOPEPQ8N6M6 819 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 MRPS27Q92552 414 aaKnown RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 CEP126Q9P2H0 1117 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 CEP83Q9Y592 693 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 RNF113AO15541 343 aaKnown RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 ATP8B1O43520 1251 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 KCNQ2O43526 872 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 MCAMP43121 646 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 ZAP70P43403 619 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 TEX35Q5T0J7 233 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 FSIP1Q8NA03 581 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 NOL10Q9BSC4 688 aaKnown RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 LRRC2Q9BYS8 371 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 PHLPP2Q6ZVD8 1323 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 ABCC12Q96J65 1359 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 CAMTA2O94983 1202 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 ME1P48163 572 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 SCRN1Q12765 414 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 SUSD4Q5VX71 490 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 NSUN7Q8NE18 718 aaKnown RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 DSCC1Q9BVC3 393 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 GOLPH3LQ9H4A5 285 aa8.47□□□□□ -1.05
BEST3-212ENST00000553096 TRMT1Q9NXH9 659 aaKnown RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 TRMT112Q9UI30 125 aaKnown RBP8.47□□□□□ -1.05
BEST3-212ENST00000553096 BRWD3Q6RI45 1802 aa8.46□□□□□ -1.05
BEST3-212ENST00000553096 PTPDC1A2A3K4 754 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 FKBP4Q02790 459 aaKnown RBP eCLIP8.46□□□□□ -1.06
BEST3-212ENST00000553096 ARID5BQ14865 1188 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 TTC39AQ5SRH9 613 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 ADALQ6DHV7 355 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 TTLL5Q6EMB2 1281 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 DHX32Q7L7V1 743 aaKnown RBP8.46□□□□□ -1.06
BEST3-212ENST00000553096 PTF1AQ7RTS3 328 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 DDX11Q96FC9 970 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 PPP1R13BQ96KQ4 1090 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 SDF4Q9BRK5 362 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 CCDC87Q9NVE4 849 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.46□□□□□ -1.06
BEST3-212ENST00000553096 LOC102724428A0A0B4J2F2 783 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 MYO1BO43795 1136 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 ATP6V1AP38606 617 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 SIK1P57059 783 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 CCDC93Q567U6 631 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 BARGINQ6ZT62 677 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 FCHSD1Q86WN1 690 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 NKX2-3Q8TAU0 364 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 KCNG4Q8TDN1 519 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 USP28Q96RU2 1077 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 CDCA7Q9BWT1 371 aaPredicted RBP8.46□□□□□ -1.06
BEST3-212ENST00000553096 RTEL1Q9NZ71 1219 aa8.46□□□□□ -1.06
BEST3-212ENST00000553096 TNRC6CQ9HCJ0 1690 aaKnown RBP8.45□□□□□ -1.06
BEST3-212ENST00000553096 TIAM2Q8IVF5 1701 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 CBFA2T2O43439 604 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 PDE8AO60658 829 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 METTL24Q5JXM2 366 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 RINLQ6ZS11 566 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 FMR1NBQ8N0W7 255 aaPredicted RBP8.45□□□□□ -1.06
BEST3-212ENST00000553096 ZNF274Q96GC6 653 aaPredicted RBP8.45□□□□□ -1.06
BEST3-212ENST00000553096 AGXT2Q9BYV1 514 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 PUS7LQ9H0K6 701 aaKnown RBP8.45□□□□□ -1.06
BEST3-212ENST00000553096 RAI14Q9P0K7 980 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 AKAP2Q9Y2D5 859 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 ANKRD18BA2A2Z9 1011 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 SNAP23O00161 211 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 SMC2O95347 1197 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 YEATS4O95619 227 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 EXOSC10Q01780 885 aaKnown RBP8.45□□□□□ -1.06
BEST3-212ENST00000553096 CEBPZQ03701 1054 aaKnown RBP8.45□□□□□ -1.06
BEST3-212ENST00000553096 E4F1Q66K89 784 aaPredicted RBP8.45□□□□□ -1.06
BEST3-212ENST00000553096 TMCO3Q6UWJ1 677 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 LDHAL6AQ6ZMR3 332 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 KIAA1468Q9P260 1216 aa8.45□□□□□ -1.06
BEST3-212ENST00000553096 SALL1Q9NSC2 1324 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 E7EWF7 191 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 IKBKBO14920 756 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 FGFR2P21802 821 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 CYP2C19P33261 490 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 NLRP12P59046 1061 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 TMC6Q7Z403 805 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 UBXN4Q92575 508 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 CALR3Q96L12 384 aaKnown RBP8.44□□□□□ -1.06
BEST3-212ENST00000553096 NBPF3Q9H094 633 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 PIH1D3Q9NQM4 214 aaKnown RBP8.44□□□□□ -1.06
BEST3-212ENST00000553096 SEC31BQ9NQW1 1179 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.44□□□□□ -1.06
BEST3-212ENST00000553096 V9GYY5 206 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms