RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 CYP2C8P10632 490 aa14.18□□□□□ -0.14
NEK3-204ENST00000552973 PSMC4P43686 418 aa14.18□□□□□ -0.14
NEK3-204ENST00000552973 MECOMQ03112 1051 aa14.18□□□□□ -0.14
NEK3-204ENST00000552973 G3BP1Q13283 466 aaKnown RBP eCLIP14.18□□□□□ -0.14
NEK3-204ENST00000552973 GPAT2Q6NUI2 795 aa14.18□□□□□ -0.14
NEK3-204ENST00000552973 SLF2Q8IX21 1173 aa14.18□□□□□ -0.14
NEK3-204ENST00000552973 SCYL3Q8IZE3 742 aa14.18□□□□□ -0.14
NEK3-204ENST00000552973 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.18□□□□□ -0.14
NEK3-204ENST00000552973 MROH7-TTC4A0A0A0MT08 1334 aa14.17□□□□□ -0.14
NEK3-204ENST00000552973 FMNL1O95466 1100 aaPredicted RBP14.17□□□□□ -0.14
NEK3-204ENST00000552973 CCDC84Q86UT8 332 aaPredicted RBP14.17□□□□□ -0.14
NEK3-204ENST00000552973 TMEM57Q8N5G2 664 aa14.17□□□□□ -0.14
NEK3-204ENST00000552973 SPATA5Q8NB90 893 aa14.17□□□□□ -0.14
NEK3-204ENST00000552973 ZNF384Q8TF68 577 aa14.17□□□□□ -0.14
NEK3-204ENST00000552973 FAM163AQ96GL9 167 aaPredicted RBP14.17□□□□□ -0.14
NEK3-204ENST00000552973 PICK1Q9NRD5 415 aa14.17□□□□□ -0.14
NEK3-204ENST00000552973 RAI14Q9P0K7 980 aa14.17□□□□□ -0.14
NEK3-204ENST00000552973 GPR75-ASB3A0A0A6YYF3 556 aa14.16□□□□□ -0.14
NEK3-204ENST00000552973 FAM196BA6NMK8 535 aa14.16□□□□□ -0.14
NEK3-204ENST00000552973 CXCL11O14625 94 aa14.16□□□□□ -0.14
NEK3-204ENST00000552973 ZBTB22O15209 634 aa14.16□□□□□ -0.14
NEK3-204ENST00000552973 PTPRAP18433 802 aa14.16□□□□□ -0.14
NEK3-204ENST00000552973 OSBPP22059 807 aa14.16□□□□□ -0.14
NEK3-204ENST00000552973 RHBDL3P58872 404 aa14.16□□□□□ -0.14
NEK3-204ENST00000552973 GADL1Q6ZQY3 521 aa14.16□□□□□ -0.14
NEK3-204ENST00000552973 TRIM47Q96LD4 638 aa14.16□□□□□ -0.14
NEK3-204ENST00000552973 ATRNL1Q5VV63 1379 aa14.16□□□□□ -0.14
NEK3-204ENST00000552973 PDS5AQ29RF7 1337 aaKnown RBP14.15□□□□□ -0.14
NEK3-204ENST00000552973 TRIM75PA6NK02 468 aa14.15□□□□□ -0.14
NEK3-204ENST00000552973 NSUN4Q96CB9 384 aaKnown RBP14.15□□□□□ -0.14
NEK3-204ENST00000552973 PARK7Q99497 189 aaKnown RBP14.15□□□□□ -0.14
NEK3-204ENST00000552973 C1orf115Q9H7X2 142 aa14.15□□□□□ -0.14
NEK3-204ENST00000552973 SNRKQ9NRH2 765 aa14.15□□□□□ -0.14
NEK3-204ENST00000552973 SRRDQ9UH36 339 aa14.15□□□□□ -0.14
NEK3-204ENST00000552973 AFG3L2Q9Y4W6 797 aa14.15□□□□□ -0.14
NEK3-204ENST00000552973 ADGRA2Q96PE1 1338 aa14.15□□□□□ -0.15
NEK3-204ENST00000552973 LAMB1P07942 1786 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 RFX7Q2KHR2 1363 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 A0A0G2JLL6 359 aaPredicted RBP14.14□□□□□ -0.15
NEK3-204ENST00000552973 GNRH1P01148 92 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 LDHCP07864 332 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 MCAMP43121 646 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 MAP3K10Q02779 954 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 MTFR1Q15390 333 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 ZKSCAN2Q63HK3 967 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 FASTKD5Q7L8L6 764 aaKnown RBP14.14□□□□□ -0.15
NEK3-204ENST00000552973 PRRT2Q7Z6L0 340 aaPredicted RBP14.14□□□□□ -0.15
NEK3-204ENST00000552973 RAET1EQ8TD07 263 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.14□□□□□ -0.15
NEK3-204ENST00000552973 LRP2BPQ9P2M1 347 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 MYPNQ86TC9 1320 aa14.14□□□□□ -0.15
NEK3-204ENST00000552973 TNRC18O15417 2968 aaPredicted RBP14.13□□□□□ -0.15
NEK3-204ENST00000552973 CTNND1O60716 968 aaKnown RBP14.13□□□□□ -0.15
NEK3-204ENST00000552973 BCRP11274 1271 aa14.13□□□□□ -0.15
NEK3-204ENST00000552973 HOXD10P28358 340 aa14.13□□□□□ -0.15
NEK3-204ENST00000552973 ARID4AP29374 1257 aaPredicted RBP14.13□□□□□ -0.15
NEK3-204ENST00000552973 PRMT2P55345 433 aa14.13□□□□□ -0.15
NEK3-204ENST00000552973 GSTO1P78417 241 aa14.13□□□□□ -0.15
NEK3-204ENST00000552973 OS9Q13438 667 aaPredicted RBP14.13□□□□□ -0.15
NEK3-204ENST00000552973 SURF6O75683 361 aaKnown RBP14.12□□□□□ -0.15
NEK3-204ENST00000552973 UQCRFS1P1P0C7P4 283 aa14.12□□□□□ -0.15
NEK3-204ENST00000552973 FCGRTP55899 365 aa14.12□□□□□ -0.15
NEK3-204ENST00000552973 HNRNPUQ00839 825 aaKnown RBP eCLIP14.12□□□□□ -0.15
NEK3-204ENST00000552973 PRKCZQ05513 592 aa14.12□□□□□ -0.15
NEK3-204ENST00000552973 TTC39AQ5SRH9 613 aa14.12□□□□□ -0.15
NEK3-204ENST00000552973 TEX11Q8IYF3 940 aa14.12□□□□□ -0.15
NEK3-204ENST00000552973 DBNDD2Q9BQY9 259 aa14.12□□□□□ -0.15
NEK3-204ENST00000552973 BIN2Q9UBW5 565 aaPredicted RBP14.12□□□□□ -0.15
NEK3-204ENST00000552973 GRK4P32298 578 aa14.11□□□□□ -0.15
NEK3-204ENST00000552973 ATP8B2P98198 1209 aa14.11□□□□□ -0.15
NEK3-204ENST00000552973 POLA2Q14181 598 aa14.11□□□□□ -0.15
NEK3-204ENST00000552973 RRP1BQ14684 758 aaKnown RBP14.11□□□□□ -0.15
NEK3-204ENST00000552973 TNNI3KQ59H18 835 aa14.11□□□□□ -0.15
NEK3-204ENST00000552973 SH3RF3Q8TEJ3 882 aaPredicted RBP14.11□□□□□ -0.15
NEK3-204ENST00000552973 OSBPL5Q9H0X9 879 aaPredicted RBP14.11□□□□□ -0.15
NEK3-204ENST00000552973 AATFQ9NY61 560 aaKnown RBP eCLIP14.11□□□□□ -0.15
NEK3-204ENST00000552973 GABRQQ9UN88 632 aa14.11□□□□□ -0.15
NEK3-204ENST00000552973 FPGT-TNNI3KV9GXZ4 949 aa14.11□□□□□ -0.15
NEK3-204ENST00000552973 ZSWIM8A7E2V4 1837 aa14.11□□□□□ -0.15
NEK3-204ENST00000552973 TBC1D12O60347 775 aa14.1□□□□□ -0.15
NEK3-204ENST00000552973 SPP2Q13103 211 aa14.1□□□□□ -0.15
NEK3-204ENST00000552973 CCDC158Q5M9N0 1113 aa14.1□□□□□ -0.15
NEK3-204ENST00000552973 TREML2Q5T2D2 321 aa14.1□□□□□ -0.15
NEK3-204ENST00000552973 MIER1Q8N108 512 aa14.1□□□□□ -0.15
NEK3-204ENST00000552973 SMCR8Q8TEV9 937 aaPredicted RBP14.1□□□□□ -0.15
NEK3-204ENST00000552973 GCC1Q96CN9 775 aa14.1□□□□□ -0.15
NEK3-204ENST00000552973 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
NEK3-204ENST00000552973 RLBP1P12271 317 aa14.09□□□□□ -0.15
NEK3-204ENST00000552973 HABP4Q5JVS0 413 aaKnown RBP14.09□□□□□ -0.15
NEK3-204ENST00000552973 NAA16Q6N069 864 aaPredicted RBP14.09□□□□□ -0.15
NEK3-204ENST00000552973 ITPRIPQ8IWB1 547 aa14.09□□□□□ -0.15
NEK3-204ENST00000552973 FTSJ3Q8IY81 847 aaKnown RBP14.09□□□□□ -0.15
NEK3-204ENST00000552973 ANKRD13CQ8N6S4 541 aa14.09□□□□□ -0.15
NEK3-204ENST00000552973 SSH3Q8TE77 659 aa14.09□□□□□ -0.15
NEK3-204ENST00000552973 NOL10Q9BSC4 688 aaKnown RBP14.09□□□□□ -0.15
NEK3-204ENST00000552973 CCDC8Q9H0W5 538 aaPredicted RBP14.09□□□□□ -0.15
NEK3-204ENST00000552973 MYH13Q9UKX3 1938 aa14.09□□□□□ -0.15
NEK3-204ENST00000552973 PDE4DIPQ5VU43 2346 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 CYP2E1P05181 493 aaPredicted RBP14.08□□□□□ -0.16
NEK3-204ENST00000552973 CCL5P13501 91 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms