RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 GSTO1P78417 241 aa9.31□□□□□ -0.92
NPAS3-213ENST00000552874 MAP3K12Q12852 859 aa9.31□□□□□ -0.92
NPAS3-213ENST00000552874 ZMYM1Q5SVZ6 1142 aa9.31□□□□□ -0.92
NPAS3-213ENST00000552874 RBM26Q5T8P6 1007 aaKnown RBP9.31□□□□□ -0.92
NPAS3-213ENST00000552874 SLC9C2Q5TAH2 1124 aa9.31□□□□□ -0.92
NPAS3-213ENST00000552874 TICAM2Q86XR7 235 aa9.31□□□□□ -0.92
NPAS3-213ENST00000552874 LCORLQ8N3X6 602 aa9.31□□□□□ -0.92
NPAS3-213ENST00000552874 SH3RF3Q8TEJ3 882 aaPredicted RBP9.31□□□□□ -0.92
NPAS3-213ENST00000552874 OSBP2Q969R2 916 aa9.31□□□□□ -0.92
NPAS3-213ENST00000552874 RLFQ13129 1914 aa9.31□□□□□ -0.92
NPAS3-213ENST00000552874 FLT1P17948 1338 aa9.31□□□□□ -0.92
NPAS3-213ENST00000552874 HTTP42858 3142 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 ROBO3Q96MS0 1386 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 A0A0D9SFI3 127 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 M0R2C6 588 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 RNF113AO15541 343 aaKnown RBP9.3□□□□□ -0.92
NPAS3-213ENST00000552874 CYP7A1P22680 504 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 KRT26Q7Z3Y9 468 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 FAM83AQ86UY5 434 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 ZFPM1Q8IX07 1006 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 CNTROBQ8N137 903 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 EVI5LQ96CN4 794 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 CDCA5Q96FF9 252 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 PUS7LQ9H0K6 701 aaKnown RBP9.3□□□□□ -0.92
NPAS3-213ENST00000552874 EPB41L4AQ9HCS5 686 aaPredicted RBP9.3□□□□□ -0.92
NPAS3-213ENST00000552874 AATFQ9NY61 560 aaKnown RBP eCLIP9.3□□□□□ -0.92
NPAS3-213ENST00000552874 PPP2R3BQ9Y5P8 575 aa9.3□□□□□ -0.92
NPAS3-213ENST00000552874 SDSP20132 328 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 RGS3P49796 1198 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 RASA3Q14644 834 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 BMP2KLQ5H9B9 411 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 CST9Q5W186 159 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 ZNF589Q86UQ0 364 aaPredicted RBP9.29□□□□□ -0.92
NPAS3-213ENST00000552874 USP48Q86UV5 1035 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 SLF2Q8IX21 1173 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 MIGA1Q8NAN2 632 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 APPBP2Q92624 585 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 FAM227BQ96M60 508 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 SEC62Q99442 399 aaKnown RBP9.29□□□□□ -0.92
NPAS3-213ENST00000552874 TMEM39BQ9GZU3 492 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 DEFB129Q9H1M3 183 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 DNAJC18Q9H819 358 aa9.29□□□□□ -0.92
NPAS3-213ENST00000552874 A0A0G2JMZ2 1700 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 DDTLA6NHG4 134 aaPredicted RBP9.28□□□□□ -0.92
NPAS3-213ENST00000552874 TCP10L2B9ZVM9 353 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 ENTPD3O75355 529 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 MBD4O95243 580 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 LDHCP07864 332 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 ZFYP08048 801 aaPredicted RBP9.28□□□□□ -0.92
NPAS3-213ENST00000552874 SLURP2P0DP57 97 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 RBM5P52756 815 aaKnown RBP eCLIP9.28□□□□□ -0.92
NPAS3-213ENST00000552874 MAP3K10Q02779 954 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 CDC37L1Q7L3B6 337 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 METTL16Q86W50 562 aaKnown RBP9.28□□□□□ -0.92
NPAS3-213ENST00000552874 TEX11Q8IYF3 940 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 FAM151AQ8WW52 585 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 FSD1Q9BTV5 496 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.28□□□□□ -0.92
NPAS3-213ENST00000552874 OSBPL5Q9H0X9 879 aaPredicted RBP9.28□□□□□ -0.92
NPAS3-213ENST00000552874 ARMT1Q9H993 441 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 VEZTQ9HBM0 779 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 USP40Q9NVE5 1235 aa9.28□□□□□ -0.92
NPAS3-213ENST00000552874 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
NPAS3-213ENST00000552874 MAGEB6P1A0A0J9YX57 407 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 SMIM22K7EJ46 135 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 GPAA1O43292 621 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 PRKAB2O43741 272 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 C1QTNF8P60827 252 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 NMIQ13287 307 aaPredicted RBP9.27□□□□□ -0.93
NPAS3-213ENST00000552874 TNFAIP1Q13829 316 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 MAP3K11Q16584 847 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 NBPF12Q5TAG4 269 aaPredicted RBP9.27□□□□□ -0.93
NPAS3-213ENST00000552874 PRAMEF18Q5VWM3 479 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 ZSCAN25Q6NSZ9 544 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 CCDC129Q6ZRS4 1044 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 DCPSQ96C86 337 aaKnown RBP9.27□□□□□ -0.93
NPAS3-213ENST00000552874 STRBPQ96SI9 672 aaKnown RBP9.27□□□□□ -0.93
NPAS3-213ENST00000552874 ZMYM6O95789 1325 aa9.27□□□□□ -0.93
NPAS3-213ENST00000552874 COL11A1P12107 1806 aaPredicted RBP9.26□□□□□ -0.93
NPAS3-213ENST00000552874 GSG1L2A8MUP6 293 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 GALR2O43603 387 aaPredicted RBP9.26□□□□□ -0.93
NPAS3-213ENST00000552874 MYO1BO43795 1136 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 PLCG2P16885 1265 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 CHMLP26374 656 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 VPS53Q5VIR6 699 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 CERS3Q8IU89 383 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 MAPKAPK5Q8IW41 473 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 TGFBRAP1Q8WUH2 860 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 SDR42E1Q8WUS8 393 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 DCP1AQ9NPI6 582 aaPredicted RBP9.26□□□□□ -0.93
NPAS3-213ENST00000552874 FZD1Q9UP38 647 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 CENPFP49454 3210 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 RAD50Q92878 1312 aa9.26□□□□□ -0.93
NPAS3-213ENST00000552874 BAG3O95817 575 aa9.25□□□□□ -0.93
NPAS3-213ENST00000552874 APLP1P51693 650 aa9.25□□□□□ -0.93
NPAS3-213ENST00000552874 GABPAQ06546 454 aa9.25□□□□□ -0.93
NPAS3-213ENST00000552874 TCP10Q12799 353 aa9.25□□□□□ -0.93
NPAS3-213ENST00000552874 RRP1BQ14684 758 aaKnown RBP9.25□□□□□ -0.93
NPAS3-213ENST00000552874 MOB2Q70IA6 237 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms