RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 USP17L21D6R901 530 aa14.95□□□□□ -0.02
CACNB3-223ENST00000552480 SH2B2O14492 632 aaPredicted RBP14.95□□□□□ -0.02
CACNB3-223ENST00000552480 PPIP5K2O43314 1243 aa14.95□□□□□ -0.02
CACNB3-223ENST00000552480 KDM4AO75164 1064 aa14.95□□□□□ -0.02
CACNB3-223ENST00000552480 FGRP09769 529 aa14.95□□□□□ -0.02
CACNB3-223ENST00000552480 GJB2P29033 226 aa14.95□□□□□ -0.02
CACNB3-223ENST00000552480 ANGEL1Q9UNK9 670 aaKnown RBP14.95□□□□□ -0.02
CACNB3-223ENST00000552480 CD2APQ9Y5K6 639 aa14.95□□□□□ -0.02
CACNB3-223ENST00000552480 CDK5RAP2Q96SN8 1893 aa14.95□□□□□ -0.02
CACNB3-223ENST00000552480 PSME4Q14997 1843 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 FOCADQ5VW36 1801 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 CYP2D7A0A087X1C5 515 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 USP17L3A6NCW0 530 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 USP17L4A6NCW7 530 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 BRD1O95696 1058 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 SLC3A2P08195 630 aaKnown RBP14.94□□□□□ -0.02
CACNB3-223ENST00000552480 PDIA3P30101 505 aaKnown RBP14.94□□□□□ -0.02
CACNB3-223ENST00000552480 SCRN1Q12765 414 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 PKP1Q13835 747 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 DACT2Q5SW24 774 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 CLEC17AQ6ZS10 378 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 USP17L1Q7RTZ2 530 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 TEX11Q8IYF3 940 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 NKX2-3Q8TAU0 364 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 ESR2Q92731 530 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 GBP4Q96PP9 640 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 LLPHQ9BRT6 129 aaKnown RBP14.94□□□□□ -0.02
CACNB3-223ENST00000552480 INCENPQ9NQS7 918 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 GPHNQ9NQX3 736 aaPredicted RBP14.94□□□□□ -0.02
CACNB3-223ENST00000552480 TOMM22Q9NS69 142 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 TTF2Q9UNY4 1162 aaKnown RBP14.94□□□□□ -0.02
CACNB3-223ENST00000552480 ZDHHC9Q9Y397 364 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 ROBO3Q96MS0 1386 aa14.94□□□□□ -0.02
CACNB3-223ENST00000552480 SCN9AQ15858 1988 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 KLF18A0A0U1RQI7 1052 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 PSDA5PKW4 1024 aaPredicted RBP14.93□□□□□ -0.02
CACNB3-223ENST00000552480 ORC4O43929 436 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 PTGER2P43116 358 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 NT5C2P49902 561 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 RHBDL3P58872 404 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 DALRD3Q5D0E6 543 aaKnown RBP14.93□□□□□ -0.02
CACNB3-223ENST00000552480 RRP12Q5JTH9 1297 aaKnown RBP14.93□□□□□ -0.02
CACNB3-223ENST00000552480 HHIPL2Q6UWX4 724 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 AMOTL1Q8IY63 956 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 IGDCC4Q8TDY8 1250 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 TGFBRAP1Q8WUH2 860 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 MXD3Q9BW11 206 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 MRIQ9BWK5 157 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 KCNQ5Q9NR82 932 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 MCM9Q9NXL9 1143 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 ZSWIM5Q9P217 1185 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 BRPF3Q9ULD4 1205 aa14.93□□□□□ -0.02
CACNB3-223ENST00000552480 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.93□□□□□ -0.02
CACNB3-223ENST00000552480 WDR33Q9C0J8 1336 aaKnown RBP14.92□□□□□ -0.02
CACNB3-223ENST00000552480 GOLGA8BA8MQT2 603 aa14.92□□□□□ -0.02
CACNB3-223ENST00000552480 F8W031 263 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-223ENST00000552480 CYP2D6P10635 497 aa14.92□□□□□ -0.02
CACNB3-223ENST00000552480 PDIA4P13667 645 aaKnown RBP14.92□□□□□ -0.02
CACNB3-223ENST00000552480 MCM4P33991 863 aa14.92□□□□□ -0.02
CACNB3-223ENST00000552480 LIFRP42702 1097 aa14.92□□□□□ -0.02
CACNB3-223ENST00000552480 HDLBPQ00341 1268 aaKnown RBP14.92□□□□□ -0.02
CACNB3-223ENST00000552480 SART3Q15020 963 aaKnown RBP14.92□□□□□ -0.02
CACNB3-223ENST00000552480 TMEM67Q5HYA8 995 aa14.92□□□□□ -0.02
CACNB3-223ENST00000552480 C12orf60Q5U649 245 aa14.92□□□□□ -0.02
CACNB3-223ENST00000552480 SGMS1Q86VZ5 419 aa14.92□□□□□ -0.02
CACNB3-223ENST00000552480 TEKT1Q969V4 418 aa14.92□□□□□ -0.02
CACNB3-223ENST00000552480 LY9Q9HBG7 655 aa14.92□□□□□ -0.02
CACNB3-223ENST00000552480 NAP1L2Q9ULW6 460 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-223ENST00000552480 ADAMTSL1Q8N6G6 1762 aa14.92□□□□□ -0.02
CACNB3-223ENST00000552480 YDJCA8MPS7 323 aa14.91□□□□□ -0.02
CACNB3-223ENST00000552480 SMIM22K7EJ46 135 aa14.91□□□□□ -0.02
CACNB3-223ENST00000552480 IFIT3O14879 490 aaKnown RBP14.91□□□□□ -0.02
CACNB3-223ENST00000552480 USP17L8P0C7I0 530 aa14.91□□□□□ -0.02
CACNB3-223ENST00000552480 PDCP20941 246 aa14.91□□□□□ -0.02
CACNB3-223ENST00000552480 PDE4BQ07343 736 aa14.91□□□□□ -0.02
CACNB3-223ENST00000552480 MAPKAPK5Q8IW41 473 aa14.91□□□□□ -0.02
CACNB3-223ENST00000552480 STK11IPQ8N1F8 1099 aa14.91□□□□□ -0.02
CACNB3-223ENST00000552480 SMARCC2Q8TAQ2 1214 aa14.91□□□□□ -0.02
CACNB3-223ENST00000552480 FLT1P17948 1338 aa14.91□□□□□ -0.02
CACNB3-223ENST00000552480 NID2Q14112 1375 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 ERICH2A1L162 156 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 DDX11L8A8MPP1 907 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 STX6O43752 255 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 SYT1P21579 422 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 CRKP46108 304 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 SCNN1DP51172 638 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 CCT2P78371 535 aaKnown RBP14.9□□□□□ -0.02
CACNB3-223ENST00000552480 HMGN5P82970 282 aaKnown RBP14.9□□□□□ -0.02
CACNB3-223ENST00000552480 TMTC2Q8N394 836 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 LARGE2Q8N3Y3 721 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 NSUN7Q8NE18 718 aaKnown RBP14.9□□□□□ -0.02
CACNB3-223ENST00000552480 ZNF277Q9NRM2 450 aaPredicted RBP14.9□□□□□ -0.02
CACNB3-223ENST00000552480 PPP1R1BQ9UD71 204 aaPredicted RBP14.9□□□□□ -0.02
CACNB3-223ENST00000552480 HPS5Q9UPZ3 1129 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 FER1L6Q2WGJ9 1857 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 COL4A5P29400 1685 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 MYO3BQ8WXR4 1341 aa14.9□□□□□ -0.02
CACNB3-223ENST00000552480 CCDC69A6NI79 296 aa14.89□□□□□ -0.03
CACNB3-223ENST00000552480 DHX16O60231 1041 aaKnown RBP14.89□□□□□ -0.03
CACNB3-223ENST00000552480 BAG4O95429 457 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms