RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 SCHIP1Q9P0W5 487 aaPredicted RBP10.33□□□□□ -0.76
BEST3-211ENST00000552295 SUPT16HQ9Y5B9 1047 aaKnown RBP10.33□□□□□ -0.76
BEST3-211ENST00000552295 CICQ96RK0 1608 aaPredicted RBP10.33□□□□□ -0.76
BEST3-211ENST00000552295 KRT27Q7Z3Y8 459 aa10.32□□□□□ -0.76
BEST3-211ENST00000552295 TTC5Q8N0Z6 440 aa10.32□□□□□ -0.76
BEST3-211ENST00000552295 SYTL4Q96C24 671 aaPredicted RBP10.32□□□□□ -0.76
BEST3-211ENST00000552295 TRIM11Q96F44 468 aa10.32□□□□□ -0.76
BEST3-211ENST00000552295 ZNF496Q96IT1 587 aaPredicted RBP10.32□□□□□ -0.76
BEST3-211ENST00000552295 PLVAPQ9BX97 442 aa10.32□□□□□ -0.76
BEST3-211ENST00000552295 ATG3Q9NT62 314 aa10.32□□□□□ -0.76
BEST3-211ENST00000552295 ZNF358Q9NW07 568 aa10.32□□□□□ -0.76
BEST3-211ENST00000552295 ASAP1Q9ULH1 1129 aa10.32□□□□□ -0.76
BEST3-211ENST00000552295 TJP1Q07157 1748 aa10.32□□□□□ -0.76
BEST3-211ENST00000552295 ZNF831Q5JPB2 1677 aa10.31□□□□□ -0.76
BEST3-211ENST00000552295 KCNQ2O43526 872 aa10.31□□□□□ -0.76
BEST3-211ENST00000552295 BCAR3O75815 825 aa10.31□□□□□ -0.76
BEST3-211ENST00000552295 HOXB7P09629 217 aa10.31□□□□□ -0.76
BEST3-211ENST00000552295 ALAS2P22557 587 aa10.31□□□□□ -0.76
BEST3-211ENST00000552295 ALDH1L2Q3SY69 923 aa10.31□□□□□ -0.76
BEST3-211ENST00000552295 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.31□□□□□ -0.76
BEST3-211ENST00000552295 ZDHHC1Q8WTX9 485 aa10.31□□□□□ -0.76
BEST3-211ENST00000552295 SSH1Q8WYL5 1049 aa10.31□□□□□ -0.76
BEST3-211ENST00000552295 BCL2L13Q9BXK5 485 aa10.31□□□□□ -0.76
BEST3-211ENST00000552295 LY75O60449 1722 aa10.3□□□□□ -0.76
BEST3-211ENST00000552295 ELOA3CA0A087WX78 387 aaPredicted RBP10.3□□□□□ -0.76
BEST3-211ENST00000552295 PRAMEF22A3QJZ6 481 aa10.3□□□□□ -0.76
BEST3-211ENST00000552295 ELOA3DA6NLF2 546 aaPredicted RBP10.3□□□□□ -0.76
BEST3-211ENST00000552295 SPATA31C1P0DKV0 1188 aa10.3□□□□□ -0.76
BEST3-211ENST00000552295 RRP1P56182 461 aaKnown RBP10.3□□□□□ -0.76
BEST3-211ENST00000552295 TEAD4Q15561 434 aa10.3□□□□□ -0.76
BEST3-211ENST00000552295 ELOA3BQ3SY89 546 aa10.3□□□□□ -0.76
BEST3-211ENST00000552295 PTF1AQ7RTS3 328 aa10.3□□□□□ -0.76
BEST3-211ENST00000552295 ELOA3Q8NG57 546 aa10.3□□□□□ -0.76
BEST3-211ENST00000552295 FMNL2Q96PY5 1086 aa10.3□□□□□ -0.76
BEST3-211ENST00000552295 NEUROD4Q9HD90 331 aa10.3□□□□□ -0.76
BEST3-211ENST00000552295 SMC4Q9NTJ3 1288 aa10.3□□□□□ -0.76
BEST3-211ENST00000552295 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
BEST3-211ENST00000552295 NOS2P35228 1153 aa10.29□□□□□ -0.76
BEST3-211ENST00000552295 NCOA4Q13772 614 aa10.29□□□□□ -0.76
BEST3-211ENST00000552295 DOC2BQ14184 412 aa10.29□□□□□ -0.76
BEST3-211ENST00000552295 LRRC69Q6ZNQ3 347 aa10.29□□□□□ -0.76
BEST3-211ENST00000552295 FAM196AQ6ZSG2 479 aa10.29□□□□□ -0.76
BEST3-211ENST00000552295 SYT9Q86SS6 491 aa10.29□□□□□ -0.76
BEST3-211ENST00000552295 ZNF232Q9UNY5 417 aa10.29□□□□□ -0.76
BEST3-211ENST00000552295 COG6Q9Y2V7 657 aa10.29□□□□□ -0.76
BEST3-211ENST00000552295 COL5A3P25940 1745 aaPredicted RBP10.29□□□□□ -0.76
BEST3-211ENST00000552295 TNS1Q9HBL0 1735 aaKnown RBP10.28□□□□□ -0.76
BEST3-211ENST00000552295 SPDYE3A6NKU9 549 aa10.28□□□□□ -0.76
BEST3-211ENST00000552295 EML1O00423 815 aa10.28□□□□□ -0.76
BEST3-211ENST00000552295 PTCD1O75127 700 aaKnown RBP10.28□□□□□ -0.76
BEST3-211ENST00000552295 SNRPA1P09661 255 aaKnown RBP10.28□□□□□ -0.76
BEST3-211ENST00000552295 GATA4P43694 442 aa10.28□□□□□ -0.76
BEST3-211ENST00000552295 HDGFL1Q5TGJ6 251 aa10.28□□□□□ -0.76
BEST3-211ENST00000552295 CCDC30Q5VVM6 783 aa10.28□□□□□ -0.76
BEST3-211ENST00000552295 ALG2Q9H553 416 aa10.28□□□□□ -0.76
BEST3-211ENST00000552295 GPC6Q9Y625 555 aaPredicted RBP10.28□□□□□ -0.76
BEST3-211ENST00000552295 PALLDQ8WX93 1383 aa10.27□□□□□ -0.76
BEST3-211ENST00000552295 PLIN1O60240 522 aa10.27□□□□□ -0.77
BEST3-211ENST00000552295 EIF2S2P20042 333 aaKnown RBP10.27□□□□□ -0.77
BEST3-211ENST00000552295 SLC9A9Q8IVB4 645 aa10.27□□□□□ -0.77
BEST3-211ENST00000552295 SMARCC1Q92922 1105 aaPredicted RBP10.27□□□□□ -0.77
BEST3-211ENST00000552295 SEMA6BQ9H3T3 888 aa10.27□□□□□ -0.77
BEST3-211ENST00000552295 USP16Q9Y5T5 823 aa10.27□□□□□ -0.77
BEST3-211ENST00000552295 TAF1LQ8IZX4 1826 aa10.27□□□□□ -0.77
BEST3-211ENST00000552295 RREB1Q92766 1687 aa10.27□□□□□ -0.77
BEST3-211ENST00000552295 KIF16BQ96L93 1317 aa10.27□□□□□ -0.77
BEST3-211ENST00000552295 SIN3BO75182 1162 aa10.26□□□□□ -0.77
BEST3-211ENST00000552295 EPHA4P54764 986 aa10.26□□□□□ -0.77
BEST3-211ENST00000552295 STK31Q9BXU1 1019 aa10.26□□□□□ -0.77
BEST3-211ENST00000552295 CHMP4AQ9BY43 222 aa10.26□□□□□ -0.77
BEST3-211ENST00000552295 N4BP2Q86UW6 1770 aaPredicted RBP10.26□□□□□ -0.77
BEST3-211ENST00000552295 USP17L5A8MUK1 530 aa10.25□□□□□ -0.77
BEST3-211ENST00000552295 PRRT3Q5FWE3 981 aa10.25□□□□□ -0.77
BEST3-211ENST00000552295 TBCELQ5QJ74 424 aa10.25□□□□□ -0.77
BEST3-211ENST00000552295 ZKSCAN2Q63HK3 967 aa10.25□□□□□ -0.77
BEST3-211ENST00000552295 DNAJC10Q8IXB1 793 aa10.25□□□□□ -0.77
BEST3-211ENST00000552295 TNS4Q8IZW8 715 aa10.25□□□□□ -0.77
BEST3-211ENST00000552295 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.25□□□□□ -0.77
BEST3-211ENST00000552295 FRAT1Q92837 279 aaPredicted RBP10.25□□□□□ -0.77
BEST3-211ENST00000552295 MDFIQ99750 246 aa10.25□□□□□ -0.77
BEST3-211ENST00000552295 CHPF2Q9P2E5 772 aa10.25□□□□□ -0.77
BEST3-211ENST00000552295 NOB1Q9ULX3 412 aaKnown RBP10.25□□□□□ -0.77
BEST3-211ENST00000552295 RGPD3A6NKT7 1758 aaPredicted RBP10.24□□□□□ -0.77
BEST3-211ENST00000552295 RGPD4Q7Z3J3 1758 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 LOC102724428A0A0B4J2F2 783 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 SERTM1A2A2V5 107 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 ADARB2-AS1A8MUL3 147 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 TRIM37O94972 964 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 SIK1P57059 783 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 PROSER3Q2NL68 480 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 C20orf194Q5TEA3 1177 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 G2E3Q7L622 706 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 TRIM50Q86XT4 487 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 DEPDC4Q8N2C3 294 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 RHPN1Q8TCX5 695 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 ARHGAP45Q92619 1136 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 TEX13AQ9BXU3 409 aaPredicted RBP10.24□□□□□ -0.77
BEST3-211ENST00000552295 DBF4Q9UBU7 674 aaPredicted RBP10.24□□□□□ -0.77
BEST3-211ENST00000552295 TNNQ9UQP3 1299 aa10.24□□□□□ -0.77
BEST3-211ENST00000552295 MYH14Q7Z406 1995 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms