RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 SNAP25P60880 206 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 CTCFLQ8NI51 663 aaPredicted RBP9.57□□□□□ -0.88
CHPT1-208ENST00000552215 NSUN4Q96CB9 384 aaKnown RBP9.57□□□□□ -0.88
CHPT1-208ENST00000552215 RNF41Q9H4P4 317 aaPredicted RBP9.57□□□□□ -0.88
CHPT1-208ENST00000552215 CNOT7Q9UIV1 285 aaKnown RBP9.57□□□□□ -0.88
CHPT1-208ENST00000552215 FRMPD2Q68DX3 1309 aaPredicted RBP9.57□□□□□ -0.88
CHPT1-208ENST00000552215 PRPF40AO75400 957 aaKnown RBP9.57□□□□□ -0.88
CHPT1-208ENST00000552215 PLS1Q14651 629 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 NBPF9Q3BBW0 867 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 PRMT6Q96LA8 375 aaPredicted RBP9.57□□□□□ -0.88
CHPT1-208ENST00000552215 DHX32Q7L7V1 743 aaKnown RBP9.57□□□□□ -0.88
CHPT1-208ENST00000552215 PODNQ7Z5L7 613 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 CATIPQ7Z7H3 387 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 VGLL2Q8N8G2 317 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 PANK2Q9BZ23 570 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 UBA5Q9GZZ9 404 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 GJB4Q9NTQ9 266 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 ORC3Q9UBD5 711 aaPredicted RBP9.57□□□□□ -0.88
CHPT1-208ENST00000552215 ZBTB43O43298 467 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 FGFR2P21802 821 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 UBE3CQ15386 1083 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 RUFY3Q7L099 469 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 CPXCR1Q8N123 301 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 ZNRF3Q9ULT6 936 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.56□□□□□ -0.88
CHPT1-208ENST00000552215 HSPA4P34932 840 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 TBC1D10CQ8IV04 446 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.56□□□□□ -0.88
CHPT1-208ENST00000552215 HOMER2Q9NSB8 354 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.56□□□□□ -0.88
CHPT1-208ENST00000552215 DAGLAQ9Y4D2 1042 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 TRIM22Q8IYM9 498 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 MAP4K1Q92918 833 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 TMEM39BQ9GZU3 492 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 CHMP5Q9NZZ3 219 aa9.56□□□□□ -0.88
CHPT1-208ENST00000552215 LARGE1O95461 756 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 PLCD1P51178 756 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 PKP1Q13835 747 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 AKNAD1Q5T1N1 836 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 STYK1Q6J9G0 422 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 TTC6Q86TZ1 520 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 DDX49Q9Y6V7 483 aaKnown RBP9.55□□□□□ -0.88
CHPT1-208ENST00000552215 ZSWIM5Q9P217 1185 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 GSG1L2A8MUP6 293 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 PLCG2P16885 1265 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 TNIP1Q15025 636 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 CERS5Q8N5B7 392 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 TDRD7Q8NHU6 1098 aaKnown RBP9.55□□□□□ -0.88
CHPT1-208ENST00000552215 GBP4Q96PP9 640 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 AOX1Q06278 1338 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 ZNF609O15014 1411 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 BAZ2BQ9UIF8 2168 aaKnown RBP9.55□□□□□ -0.88
CHPT1-208ENST00000552215 MYH14Q7Z406 1995 aaKnown RBP9.55□□□□□ -0.88
CHPT1-208ENST00000552215 RPS6KB1P23443 525 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 ARID4AP29374 1257 aaPredicted RBP9.55□□□□□ -0.88
CHPT1-208ENST00000552215 SLC16A2P36021 539 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 ZFPM1Q8IX07 1006 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 BICD2Q8TD16 824 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 TPCN1Q9ULQ1 816 aa9.55□□□□□ -0.88
CHPT1-208ENST00000552215 GNAT2P19087 354 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 EPS15P42566 896 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 SAFBQ15424 915 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHPT1-208ENST00000552215 ME3Q16798 604 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 HEATR3Q7Z4Q2 680 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 SULF1Q8IWU6 871 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 DCP1AQ9NPI6 582 aaPredicted RBP9.54□□□□□ -0.88
CHPT1-208ENST00000552215 ANKRD1Q15327 319 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 STOX1Q6ZVD7 989 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 ANGEL2Q5VTE6 544 aaKnown RBP9.54□□□□□ -0.88
CHPT1-208ENST00000552215 TMC4Q7Z404 712 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 ZFP91Q96JP5 570 aaPredicted RBP9.54□□□□□ -0.88
CHPT1-208ENST00000552215 KRT23Q9C075 422 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 ZNF287Q9HBT7 754 aa9.54□□□□□ -0.88
CHPT1-208ENST00000552215 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
CHPT1-208ENST00000552215 TRIM75PA6NK02 468 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 RTN1Q16799 776 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 KIF3AQ9Y496 699 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 SCN11AQ9UI33 1791 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 TNKSO95271 1327 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 HOXA10P31260 410 aaPredicted RBP9.53□□□□□ -0.88
CHPT1-208ENST00000552215 NFKBIBQ15653 356 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 USH1GQ495M9 461 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 CRY2Q49AN0 593 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 C8orf76Q96K31 380 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 AIFM3Q96NN9 605 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 EPB41L4AQ9HCS5 686 aaPredicted RBP9.53□□□□□ -0.88
CHPT1-208ENST00000552215 ASTN2O75129 1339 aaPredicted RBP9.53□□□□□ -0.88
CHPT1-208ENST00000552215 NEDD4P46934 1319 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 PXDNLA1KZ92 1463 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 CERKLQ49MI3 558 aaPredicted RBP9.53□□□□□ -0.88
CHPT1-208ENST00000552215 CDC42EP5Q6NZY7 148 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 KCTD1Q719H9 257 aa9.53□□□□□ -0.88
CHPT1-208ENST00000552215 DCPSQ96C86 337 aaKnown RBP9.53□□□□□ -0.88
CHPT1-208ENST00000552215 NUP88Q99567 741 aaPredicted RBP9.53□□□□□ -0.88
CHPT1-208ENST00000552215 KIAA2012Q0VF49 1180 aa9.52□□□□□ -0.88
CHPT1-208ENST00000552215 DHX8Q14562 1220 aaKnown RBP9.52□□□□□ -0.88
CHPT1-208ENST00000552215 SOGA3Q5TF21 947 aa9.52□□□□□ -0.88
CHPT1-208ENST00000552215 CC2D2BQ6DHV5 1058 aa9.52□□□□□ -0.88
CHPT1-208ENST00000552215 KCNJ14Q9UNX9 436 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms