RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 TAF3Q5VWG9 929 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 CEP135Q66GS9 1140 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 LMOD2Q6P5Q4 547 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 SYNE3Q6ZMZ3 975 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 NYAP1Q6ZVC0 841 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 STOX1Q6ZVD7 989 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 MB21D2Q8IYB1 491 aaPredicted RBP6.23□□□□□ -1.41
CCNT1-204ENST00000551989 FSIP1Q8NA03 581 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 LINC00301Q8NCQ3 95 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 ANKK1Q8NFD2 765 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 FBXO18Q8NFZ0 1043 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 KIF18AQ8NI77 898 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 KLHDC4Q8TBB5 520 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 PKNOX2Q96KN3 472 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 AK7Q96M32 723 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 USP28Q96RU2 1077 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 SRRTQ9BXP5 876 aaKnown RBP6.23□□□□□ -1.41
CCNT1-204ENST00000551989 IRX2Q9BZI1 471 aaPredicted RBP6.23□□□□□ -1.41
CCNT1-204ENST00000551989 ZMYND15Q9H091 742 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 OGFRQ9NZT2 677 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 KIAA1468Q9P260 1216 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 DACH1Q9UI36 760 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.23□□□□□ -1.41
CCNT1-204ENST00000551989 CCDC88AQ3V6T2 1871 aa6.23□□□□□ -1.41
CCNT1-204ENST00000551989 SPTLC2O15270 562 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 CSF1RP07333 972 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 SLC3A2P08195 630 aaKnown RBP6.22□□□□□ -1.41
CCNT1-204ENST00000551989 TPM1P09493 284 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 UQCRFS1P1P0C7P4 283 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 NT5C2P49902 561 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 ZC3H6P61129 1189 aaKnown RBP6.22□□□□□ -1.41
CCNT1-204ENST00000551989 DMTNQ08495 405 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 APOBRQ0VD83 1088 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 TCIRG1Q13488 830 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 PPP2R5BQ15173 497 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 UBE3CQ15386 1083 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 ALX1Q15699 326 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 C6orf132Q5T0Z8 1188 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 FAM173BQ6P4H8 233 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 KIF6Q6ZMV9 814 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 DHX40Q8IX18 779 aaKnown RBP6.22□□□□□ -1.41
CCNT1-204ENST00000551989 TRIML1Q8N9V2 468 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 ZNF397Q8NF99 534 aaPredicted RBP6.22□□□□□ -1.41
CCNT1-204ENST00000551989 ZCRB1Q8TBF4 217 aaKnown RBP6.22□□□□□ -1.41
CCNT1-204ENST00000551989 CACTINQ8WUQ7 758 aaKnown RBP6.22□□□□□ -1.41
CCNT1-204ENST00000551989 DDX11Q96FC9 970 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 TCEANC2Q96MN5 208 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 NEUROD6Q96NK8 337 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 EPAS1Q99814 870 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 SDF4Q9BRK5 362 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 CNNM2Q9H8M5 875 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 PCDHA7Q9UN72 937 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 CHMP3Q9Y3E7 222 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 RIC1Q4ADV7 1423 aa6.22□□□□□ -1.41
CCNT1-204ENST00000551989 MYH1P12882 1939 aa6.21□□□□□ -1.41
CCNT1-204ENST00000551989 CCDC69A6NI79 296 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 GOLGA8BA8MQT2 603 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 ZNF213O14771 459 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 PRC1O43663 620 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 CUTAO60888 179 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 SLU7O95391 586 aaKnown RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 SKILP12757 684 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 GNAT2P19087 354 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 SFPQP23246 707 aaKnown RBP eCLIP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 LIFRP42702 1097 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 BCAMP50895 628 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 TUBB4BP68371 445 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 CCZ1BP86790 482 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 CCZ1P86791 482 aaPredicted RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 NCBP1Q09161 790 aaKnown RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 IFIT5Q13325 482 aaKnown RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 TRIM29Q14134 588 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 SLC39A14Q15043 492 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 TAF7LQ5H9L4 462 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 GORABQ5T7V8 394 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 ANO1Q5XXA6 986 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 KANK3Q6NY19 840 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 CCDC129Q6ZRS4 1044 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 C11orf57Q6ZUT1 292 aaPredicted RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 SGMS1Q86VZ5 419 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 CCAR2Q8N163 923 aaKnown RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 ZBTB38Q8NAP3 1195 aaPredicted RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 EDC3Q96F86 508 aaKnown RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 ZFRQ96KR1 1074 aaKnown RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 C16orf45Q96MC5 204 aaPredicted RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 SEC62Q99442 399 aaKnown RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 CARD10Q9BWT7 1032 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 ORC3Q9UBD5 711 aaPredicted RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 TUBE1Q9UJT0 475 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 ANGEL1Q9UNK9 670 aaKnown RBP6.21□□□□□ -1.42
CCNT1-204ENST00000551989 TBC1D2BQ9UPU7 963 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 TAF6LQ9Y6J9 622 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 PHLPP2Q6ZVD8 1323 aa6.21□□□□□ -1.42
CCNT1-204ENST00000551989 DOT1LQ8TEK3 1739 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 KLF18A0A0U1RQI7 1052 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 CCDC196A0A1B0GTZ2 297 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 NBPF26B4DH59 902 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 ATP5J2-PTCD1G3V325 749 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 M0R2C6 588 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms