RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 SUZ12Q15022 739 aaKnown RBP9.47□□□□□ -0.89
DEPDC4-210ENST00000551642 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
DEPDC4-210ENST00000551642 ABHD8Q96I13 439 aa9.47□□□□□ -0.89
DEPDC4-210ENST00000551642 RTCBQ9Y3I0 505 aaKnown RBP9.47□□□□□ -0.89
DEPDC4-210ENST00000551642 PIK3C2AO00443 1686 aa9.47□□□□□ -0.89
DEPDC4-210ENST00000551642 KIAA1551Q9HCM1 1747 aa9.47□□□□□ -0.89
DEPDC4-210ENST00000551642 LY75O60449 1722 aa9.46□□□□□ -0.89
DEPDC4-210ENST00000551642 C1QTNF9BB2RNN3 333 aa9.46□□□□□ -0.9
DEPDC4-210ENST00000551642 FOXN1O15353 648 aa9.46□□□□□ -0.9
DEPDC4-210ENST00000551642 PRRT3Q5FWE3 981 aa9.46□□□□□ -0.9
DEPDC4-210ENST00000551642 CD163Q86VB7 1156 aa9.46□□□□□ -0.9
DEPDC4-210ENST00000551642 CPDO75976 1380 aa9.46□□□□□ -0.9
DEPDC4-210ENST00000551642 TRPM1Q7Z4N2 1603 aa9.45□□□□□ -0.9
DEPDC4-210ENST00000551642 TNRC6CQ9HCJ0 1690 aaKnown RBP9.45□□□□□ -0.9
DEPDC4-210ENST00000551642 C8orf86Q6ZUL3 223 aa9.45□□□□□ -0.9
DEPDC4-210ENST00000551642 TRPM4Q8TD43 1214 aa9.45□□□□□ -0.9
DEPDC4-210ENST00000551642 SAP130Q9H0E3 1048 aa9.45□□□□□ -0.9
DEPDC4-210ENST00000551642 PRDM10Q9NQV6 1147 aa9.45□□□□□ -0.9
DEPDC4-210ENST00000551642 ZFATQ9P243 1243 aa9.45□□□□□ -0.9
DEPDC4-210ENST00000551642 CD2APQ9Y5K6 639 aa9.45□□□□□ -0.9
DEPDC4-210ENST00000551642 USP19O94966 1318 aa9.45□□□□□ -0.9
DEPDC4-210ENST00000551642 RPGRIP1LQ68CZ1 1315 aa9.45□□□□□ -0.9
DEPDC4-210ENST00000551642 TARSP26639 723 aaKnown RBP9.44□□□□□ -0.9
DEPDC4-210ENST00000551642 CHRNA4P43681 627 aa9.44□□□□□ -0.9
DEPDC4-210ENST00000551642 DHX32Q7L7V1 743 aaKnown RBP9.44□□□□□ -0.9
DEPDC4-210ENST00000551642 ETFBKMTQ8IXQ9 262 aa9.44□□□□□ -0.9
DEPDC4-210ENST00000551642 IGFLR1Q9H665 355 aa9.44□□□□□ -0.9
DEPDC4-210ENST00000551642 FRRS1LQ9P0K9 344 aa9.44□□□□□ -0.9
DEPDC4-210ENST00000551642 N4BP2Q86UW6 1770 aaPredicted RBP9.44□□□□□ -0.9
DEPDC4-210ENST00000551642 VIRMAQ69YN4 1812 aaKnown RBP9.44□□□□□ -0.9
DEPDC4-210ENST00000551642 SBF1O95248 1867 aa9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 IGSF1Q8N6C5 1336 aa9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 ARID4AP29374 1257 aaPredicted RBP9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 GPLD1P80108 840 aa9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 TBC1D8BQ0IIM8 1120 aa9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 SAFB2Q14151 953 aaKnown RBP eCLIP9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 MSL1Q68DK7 614 aa9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 CCDC82Q8N4S0 544 aa9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 ACSBG1Q96GR2 724 aa9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 FAM13BQ9NYF5 915 aa9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 KCNMB2Q9Y691 235 aa9.43□□□□□ -0.9
DEPDC4-210ENST00000551642 BRCA1P38398 1863 aaKnown RBP9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 ITSN1Q15811 1721 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 USP54Q70EL1 1684 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 KCPQ6ZWJ8 1503 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 TNFRSF10BO14763 440 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 XYLBO75191 536 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 SASH3O75995 380 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 RARAP10276 462 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 NRLP54845 237 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 TRIM28Q13263 835 aaKnown RBP9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 PSAPL1Q6NUJ1 521 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 CAPN12Q6ZSI9 719 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 TTC9Q92623 222 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 JPH1Q9HDC5 661 aaPredicted RBP9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 NAGPAQ9UK23 515 aa9.42□□□□□ -0.9
DEPDC4-210ENST00000551642 PXDNLA1KZ92 1463 aa9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 C10orf71Q711Q0 1435 aa9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 BRD4O60885 1362 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 KIF13BQ9NQT8 1826 aa9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 ZBTB42B2RXF5 422 aa9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 HOXD8P13378 290 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 ATP2B4P23634 1241 aa9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 AFF1P51825 1210 aaKnown RBP9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 KRT25Q7Z3Z0 450 aa9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 RGL4Q8IZJ4 473 aa9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 CMTR1Q8N1G2 835 aaKnown RBP9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 TLR7Q9NYK1 1049 aaKnown RBP9.41□□□□□ -0.9
DEPDC4-210ENST00000551642 USP6P35125 1406 aa9.4□□□□□ -0.9
DEPDC4-210ENST00000551642 ADAM23O75077 832 aa9.4□□□□□ -0.9
DEPDC4-210ENST00000551642 RGS9O75916 674 aaPredicted RBP9.4□□□□□ -0.9
DEPDC4-210ENST00000551642 FAM35AQ86V20 835 aa9.4□□□□□ -0.9
DEPDC4-210ENST00000551642 NACC1Q96RE7 527 aa9.4□□□□□ -0.9
DEPDC4-210ENST00000551642 LPIN3Q9BQK8 851 aa9.4□□□□□ -0.9
DEPDC4-210ENST00000551642 MKNK1Q9BUB5 465 aa9.4□□□□□ -0.9
DEPDC4-210ENST00000551642 TFCP2L1Q9NZI6 479 aa9.4□□□□□ -0.9
DEPDC4-210ENST00000551642 STIM2Q9P246 746 aa9.4□□□□□ -0.9
DEPDC4-210ENST00000551642 USP20Q9Y2K6 914 aa9.4□□□□□ -0.9
DEPDC4-210ENST00000551642 PIK3C2GO75747 1445 aa9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 ANKRD30BQ9BXX2 1392 aa9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 SOX18P35713 384 aa9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 FAM26DQ5JW98 314 aa9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 TRAPPC3LQ5T215 181 aa9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 C16orf71Q8IYS4 520 aaPredicted RBP9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 NUDT8Q8WV74 236 aa9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 PRAM1Q96QH2 718 aa9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 HIRIP3Q9BW71 556 aaPredicted RBP9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 PCGF6Q9BYE7 350 aa9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 C1orf115Q9H7X2 142 aa9.39□□□□□ -0.91
DEPDC4-210ENST00000551642 RAB3GAP2Q9H2M9 1393 aa9.38□□□□□ -0.91
DEPDC4-210ENST00000551642 TAF1LQ8IZX4 1826 aa9.38□□□□□ -0.91
DEPDC4-210ENST00000551642 ARFGEF1Q9Y6D6 1849 aa9.38□□□□□ -0.91
DEPDC4-210ENST00000551642 ABCC6O95255 1503 aa9.38□□□□□ -0.91
DEPDC4-210ENST00000551642 NAA30Q147X3 362 aaPredicted RBP9.38□□□□□ -0.91
DEPDC4-210ENST00000551642 ABTB2Q8N961 1025 aa9.38□□□□□ -0.91
DEPDC4-210ENST00000551642 NGDNQ8NEJ9 315 aaKnown RBP9.38□□□□□ -0.91
DEPDC4-210ENST00000551642 PIK3R5Q8WYR1 880 aa9.38□□□□□ -0.91
DEPDC4-210ENST00000551642 TOGARAM1Q9Y4F4 1720 aa9.37□□□□□ -0.91
DEPDC4-210ENST00000551642 A0A0A0MRY4 1105 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms